[en] VIM-2 is an Ambler class B metallo-beta-lactamase (MBL) capable of hydrolyzing a broad-spectrum of beta-lactam antibiotics. Although the discovery and development of MBL inhibitors continue to be an area of active research, an array of potent, small molecule inhibitors is yet to be fully characterized for VIM-2. In the presented research, a compound library screening approach was used to identify and characterize VIM-2 inhibitors from a library of pharmacologically active compounds as well as a focused 'click' chemistry library. The four most potent VIM-2 inhibitors resulting from a VIM-2 screen were characterized by kinetic studies in order to determine K(i) and mechanism of enzyme inhibition. As a result, two previously described pharmacologic agents, mitoxantrone (1,4-dihydroxy-5,8-bis([2-([2-hydroxyethyl]amino)ethyl]amino)-9,10-anthracenedione) and 4-chloromercuribenzoic acid (pCMB) were found to be active, the former as a non-competitive inhibitor (K(i)=K(i)(')=1.5+/-0.2microM) and the latter as a slowly reversible or irreversible inhibitor. Additionally, two novel sulfonyl-triazole analogs from the click library were identified as potent, competitive VIM-2 inhibitors: N-((4-((but-3-ynyloxy)methyl)-1H-1,2,3-triazol-5-yl)methyl)-4-iodobenzenesulfonamide (1, K(i)=0.41+/-0.03microM) and 4-iodo-N-((4-(methoxymethyl)-1H-1,2,3-triazol-5-yl)methyl)benzenesulfonamide (2, K(i)=1.4+/-0.10microM). Mitoxantrone and pCMB were also found to potentiate imipenem efficacy in MIC and synergy assays employing Escherichia coli. Taken together, all four compounds represent useful chemical probes to further investigate mechanisms of VIM-2 inhibition in biochemical and microbiology-based assays.
Disciplines :
Biochemistry, biophysics & molecular biology
Author, co-author :
Minond, D.; The Scripps Research Institute > Lead Identification, Translational Research Institute
Saldanha, S. A.; The Scripps Research Institute > Lead Identification, Translational Research Institute
Spaargaren, M.; The Scripps Research Institute > Lead Identification, Translational Research Institute
Spicer, T.; The Scripps Research Institute > Lead Identification, Translational Research Institute
Fotsing, J. R.; The Scripps Research Institute > Department of Chemistry
Weide, T.; The Scripps Research Institute > Department of Chemistry
Fokin, V. V.; The Scripps Research Institute > Department of Chemistry
Sharpless, K. B.; The Scripps Research Institute > Department of Chemistry and the Skaggs Institute for Chemical Biology
Galleni, Moreno ; Université de Liège - ULiège > Département des sciences de la vie > Macromolécules biologiques
Bebrone, Carine ; Université de Liège - ULiège > Centre d'ingénierie des protéines
Bush K. Expert Rev. Anti Infect. Ther. 2 (2004) 165
Bush K. Clin. Microbiol. Infect. 10 (2004) 10
Jacoby G.A., and Munoz-Price L.S. N. Engl. J. Med. 352 (2005) 380
Bonomo R.A., and Szabo D. Clin. Infect. Dis. 43 (2006) S49
Livermore D.M. Ann. Med. 35 (2003) 226
Cornaglia G., Akova M., Amicosante G., Canton R., Cauda R., Docquier J.D., Edelstein M., Frere J.M., Fuzi M., Galleni M., Giamarellou H., Gniadkowski M., Koncan R., Libisch B., Luzzaro F., Miriagou V., Navarro F., Nordmann P., Pagani L., Peixe L., Poirel L., Souli M., Tacconelli E., Vatopoulos A., and Rossolini G.M. Int. J. Antimicrob. Agents 29 (2007) 380
Walsh T.R., Toleman M.A., Poirel L., and Nordmann P. Clin. Microbiol. Rev. 18 (2005) 306
Bebrone C. Biochem. Pharmacol. 74 (2007) 1686
Poirel L., Naas T., Nicolas D., Collet L., Bellais S., Cavallo J.D., and Nordmann P. Antimicrob. Agents Chemother. 44 (2000) 891
Docquier J.D., Lamotte-Brasseur J., Galleni M., Amicosante G., Frere J.M., and Rossolini G.M. J. Antimicrob. Chemother. 51 (2003) 257
Garcia-Saez I., Docquier J.D., Rossolini G.M., and Dideberg O. J. Mol. Biol. 375 (2008) 604
Pereira D.A., and Williams J.A. Br. J. Pharmacol. 152 (2007) 53
O'Callaghan C.H., Morris A., Kirby S.M., and Shingler A.H. Antimicrob. Agents Chemother. 1 (1972) 283
Zlokarnik G., Negulescu P.A., Knapp T.E., Mere L., Burres N., Feng L., Whitney M., Roemer K., and Tsien R.Y. Science 279 (1998) 84
Schroter T., Minond D., Weiser A., Dao C., Habel J., Spicer T., Chase P., Baillargeon P., Scampavia L., Schurer S., Chung C., Mader C., Southern M., Tsinoremas N., LoGrasso P., and Hodder P. J. Biomol. Screen. 13 (2008) 17
Moloughney J.G., Thomas J.D., and Toney J.H. FEMS Microbiol. Lett. 243 (2005) 65
Means G.E., and Feeney R.E. Chemical Modification of Proteins (1971), Holden-Day, San Francisco
Belyaeva T., Leontieva E., Shpakov A., Mozhenok T., and Faddejeva M. Cell Biol. Int. 27 (2003) 887
Copeland R.A. Evaluation of Enzyme Inhibitors in Drug Discovery. A Guide For Medicinal Chemists and Pharmacologists (2005), Wiley Interscience, New York
NCCLS. In M26-A: Methods for Determining Bactericidal Activity of Antimicrobial Agents; Approved Guideline, C. a. L. S. Institute, Ed.; NCCLS: Wayne, 1999; Vol. 1.
Kolb H.C., Finn M.G., and Sharpless K.B. Angew. Chem., Int. Ed. 40 (2001) 2004
Scozzafava A., and Supuran C.T. J. Med. Chem. 43 (2000) 3677
Innocenti A., Maresca A., Scozzafava A., and Supuran C.T. Bioorg. Med. Chem. Lett. 18 (2008) 3938
Jin W., Arakawa Y., Yasuzawa H., Taki T., Hashiguchi R., Mitsutani K., Shoga A., Yamaguchi Y., Kurosaki H., Shibata N., Ohta M., and Goto M. Biol. Pharm. Bull. 27 (2004) 851
Zhang J.H., Chung T.D., and Oldenburg K.R. J. Biomol. Screen. 4 (1999) 67
Nord O., Gustrin A., and Nygren P.A. FEMS Microbiol. Lett. 242 (2005) 73
Charpentier X., and Oswald E. J. Bacteriol. 186 (2004) 5486
Appelbaum P.C., Philippon A., Jacobs M.R., Spangler S.K., and Gutmann L. Antimicrob. Agents Chemother. 34 (1990) 2169
Ranu R.S., and Kaji A. J. Bacteriol. 107 (1971) 53
de Castillo M.C., Islas M.I., de Nader O.M., and de Ruiz-Holgado A.P. Rev. Latinoam. Microbiol. 43 (2001) 70
Marumo K., Takeda A., Nakamura Y., and Nakaya K. Microbiol. Immunol. 39 (1995) 27
Chen Y., Minasov G., Roth T.A., Prati F., and Shoichet B.K. J. Am. Chem. Soc. 128 (2006) 2970
Shenkenberg T.D., and Von Hoff D.D. Ann. Intern. Med. 105 (1986) 67
Koeller J., and Eble M. Clin. Pharm. 7 (1988) 574
White R.J., and Durr F.E. Invest. New Drugs 3 (1985) 85
Ala P.J., Gonneville L., Hillman M., Becker-Pasha M., Yue E.W., Douty B., Wayland B., Polam P., Crawley M.L., McLaughlin E., Sparks R.B., Glass B., Takvorian A., Combs A.P., Burn T.C., Hollis G.F., and Wynn R. J. Biol. Chem. 281 (2006) 38013
Kocalka P., Andersen N.K., Jensen F., and Nielsen P. Chembiochem 8 (2007) 2106
Kolb H.C., and Sharpless K.B. Drug Discovery Today 8 (2003) 1128
Copeland R.A. Enzymes: A Practical Introduction to Structure, Mechanism, and Data Analysis (2000), John Wiley and Sons, New York
Hodder P., Cassaday J., Peltier R., Berry K., Inglese J., Feuston B., Culberson C., Bleicher L., Cosford N.D., Bayly C., Suto C., Varney M., and Strulovici B. Anal. Biochem. 313 (2003) 246
CLSI. In M7-A7: Methods for Dilution Antimicrobial Susceptibility Tests for Bacteria That Grows Aerobically; Approved Standard, 7th ed.; C. a. L. S. Institute, Ed.; CLSI: Wayne, 2006; Vol. 2.
CLSI. In M2-A9: Performance Standards Antimicrobial Susceptibility Tests; Approved Standard, 9th ed.; C. a. L. S. Institute, Ed.; CLSI: Wayne, 2006; Vol. 1.
Orhan G., Bayram A., Zer Y., and Balci I. J. Clin. Microbiol. 43 (2005) 140
Totrov M., and Abagyan R. Proteins (1997) 215
Laraki N., Franceschini N., Rossolini G.M., Santucci P., Meunier C., de Pauw E., Amicosante G., Frere J.M., and Galleni M. Antimicrob. Agents Chemother. 43 (1999) 902