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Localizing and comparing weight maps generated from linear kernel machine learning models
Schrouff, Jessica; CREMERS, Julien; GARRAUX, Gaëtan et al.
2013In 2013 Third International Workshop on Pattern Recognition in NeuroImaging (PRNI 2013): proceedings
Peer reviewed
 

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Keywords :
machine learning; neuroimaging; model interpretation
Abstract :
[en] Recently, machine learning models have been applied to neuroimaging data, allowing to make predictions about a variable of interest based on the pattern of activation or anatomy over a set of voxels. These pattern recognition based methods present undeniable assets over classical (univariate) techniques, by providing predictions for unseen data, as well as the weights of each voxel in the model. However, the obtained weight map cannot be thresholded to perform regionally specific inference, leading to a difficult localization of the variable of interest. In this work, we provide local averages of the weights according to regions defined by anatomical or functional atlases (e.g. Brodmann atlas). These averages can then be ranked, thereby providing a sorted list of regions that can be (to a certain extent) compared with univariate results. Furthermore, we defined a “ranking distance”, allowing for the quantitative comparison between localized patterns. These concepts are illustrated with two datasets.
Research center :
GIGA CRC (Cyclotron Research Center) In vivo Imaging-Aging & Memory - ULiège
Disciplines :
Engineering, computing & technology: Multidisciplinary, general & others
Human health sciences: Multidisciplinary, general & others
Author, co-author :
Schrouff, Jessica ;  Université de Liège - ULiège > Centre de recherches du cyclotron
CREMERS, Julien ;  Centre Hospitalier Universitaire de Liège - CHU > Neurologie Sart Tilman
GARRAUX, Gaëtan  ;  Centre Hospitalier Universitaire de Liège - CHU > Neurologie Sart Tilman
Baldasarre, Lucas;  Ecole Polytechnique Fédérale de Lausanne - EPFL
Mourão-Miranda, Janaina;  University College London - UCL > Computer Science Department
Phillips, Christophe  ;  Université de Liège - ULiège > Centre de recherches du cyclotron
Language :
English
Title :
Localizing and comparing weight maps generated from linear kernel machine learning models
Publication date :
2013
Event name :
3rd Workshop on Pattern Recognition in NeuroImaging (PRNI 2013)
Event place :
Philadelphia, United States
Event date :
22-24/06/2013
Audience :
International
Main work title :
2013 Third International Workshop on Pattern Recognition in NeuroImaging (PRNI 2013): proceedings
Publisher :
IEEE Computer Society Conference Publishing Services, United States
Peer reviewed :
Peer reviewed
Funders :
F.R.S.-FNRS - Fonds de la Recherche Scientifique [BE]
FRIA - Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture [BE]
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since 30 October 2013

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