Article (Scientific journals)
Three-dimensional quantitative structure-activity relationship of MT3 melatonin binding site ligands: a comparative molecular field analysis
Farce, Amaury; Dilly, Sébastien; Sabaouni, Ahmed et al.
2007In QSAR and Combinatorial Science, 26 (7), p. 820-827
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Keywords :
CoMFA; Melatonin; QSAR
Abstract :
[en] The Three-Dimensional Quantitative Structure –Activity Relationship (3D-QSAR) approach using Comparative Molecular Field Analysis (CoMFA) was applied to a series of 39 compounds evaluated as MT3 binding site ligands. The X-ray crystal structure of MT3/quinone reductase 2 was used to obtain the putative bioactive conformation of these ligands. Five statistically significant models were obtained from the randomly constituted training sets (30 compounds) and subsequently validated with the corresponding test sets (nine compounds). The best predictive model (n=30, q2=0.608, N=3, r2=0.897, s=0.288, F=75.4) can predict inhibitory activity for a wide range of compounds and offers important structural insight into designing MT3 ligands prior to their synthesis.
Research center :
Laboratoire de Chimie Thérapeutique, Université de Lille 2
Institut de Recherches Servier
Disciplines :
Computer science
Pharmacy, pharmacology & toxicology
Author, co-author :
Farce, Amaury;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Dilly, Sébastien ;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Sabaouni, Ahmed;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Yous, Said;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Berthelot, Pascal;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Boutin, Jean A.;  Institut de Recherches Servier
Delagrange, Philippe;  Institut de Recherches Servier
Renard, Pierre;  Institut de Recherches Servier
Chavatte, Philippe;  Université de Lille 2 > Faculté des Sciences Pharmaceutiques et Biologiques > Laboratoire de Chimie Thérapeutique
Language :
English
Title :
Three-dimensional quantitative structure-activity relationship of MT3 melatonin binding site ligands: a comparative molecular field analysis
Publication date :
27 March 2007
Journal title :
QSAR and Combinatorial Science
ISSN :
1611-020X
eISSN :
1611-0218
Publisher :
WILEY-V C H VERLAG GMBH, Germany
Volume :
26
Issue :
7
Pages :
820-827
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBi :
since 09 June 2011

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