HIV reservoir; antiretroviral therapy; correlation; immune activation; inflammation; dolutegravir; Pyridones; Heterocyclic Compounds, 3-Ring; Oxazines; Piperazines; Biomarkers; HIV Integrase Inhibitors; Humans; Pyridones/therapeutic use; Oxazines/therapeutic use; Piperazines/therapeutic use; Male; Middle Aged; Female; Adult; Viral Load/drug effects; CD4 Lymphocyte Count; HIV Integrase Inhibitors/therapeutic use; Leukocytes, Mononuclear/virology; Leukocytes, Mononuclear/immunology; Heterocyclic Compounds, 3-Ring/therapeutic use; HIV Infections/drug therapy; HIV Infections/immunology; HIV Infections/virology; Inflammation/immunology; HIV-1/physiology; HIV-1/drug effects; HIV Infections; HIV-1; Leukocytes, Mononuclear; Viral Load; Immunology and Allergy; Immunology
Abstract :
[en] [en] INTRODUCTION: Despite effective antiretroviral therapy (ART), people with HIV (PWH) experience persistent immune activation and inflammation, increasing the risk of non-AIDS-related comorbidities. The contribution of the HIV reservoir to this chronic inflammatory state remains debated. Understanding the relationship between HIV persistence, immune activation, and inflammation is crucial for optimizing long-term therapeutic strategies.
METHODS: This study assessed HIV persistence, immune activation, and systemic inflammation in 49 PWH treated with the same dolutegravir-based triple ART regimen. HIV reservoir size and activity were evaluated by measuring total HIV DNA in peripheral blood mononuclear cells (PBMCs) and rectal tissue, cell-associated (CA) unspliced (US) HIV RNA, and residual viremia. Over 20 inflammatory biomarkers, including sCD14, IL-6, TNF-α, and CXCL10, were analyzed, along with comprehensive immune profiling using a 26-color spectral flow cytometry panel. Clinical parameters such as age, nadir CD4 count, and co-infections were also considered.
RESULTS AND DISCUSSION: Our findings showed a limited association between HIV persistence markers and systemic inflammation or immune activation. Compared to previous studies, participants had lower reservoir sizes and transcriptional activity, likely due to early ART initiation and prolonged suppression. Immune preservation was evident, with high CD4/CD8 ratios and reduced activation markers. These results challenge the idea that the HIV reservoir is the primary driver of chronic inflammation in PWH on a dolutegravir-based long-term ART. Instead, the reservoir may evolve toward a more transcriptionally silent and defective state, reducing its impact on systemic immune activation.
Moutschen, Michel ; Université de Liège - ULiège > GIGA > GIGA Immunobiology - Immunology & Infectious Diseases
Pasternak, Alexander O; Laboratory of Experimental Virology, Department of Medical Microbiology, Amsterdam University Medical Center (UMC), University of Amsterdam, Amsterdam, Netherlands
Darcis, Gilles ; Université de Liège - ULiège > Département des sciences cliniques > Immunopathologie - Maladies infectieuses et médecine interne générale
Language :
English
Title :
No associations between HIV reservoir and inflammation in long-term virally suppressed dolutegravir-based ART-treated individuals.
The author(s) declare that financial support was received for the research and/or publication of this article. CF-L and DA are FRIA fellows of the Belgian Fund for Scientific Research (Fonds de la Recherche Scientifique \u2013 FNRS) and are supported by the Fondation L\u00E9on Fredericq. AP acknowledges grant support from amfAR, The Foundation for AIDS Research (grant no. 1110680\u201377-RPRL), and from Partnership NWO-Dutch AIDS Fonds \u2018HIV cure for everyone\u2019 (grant no. KICH2.V4P.AF23.001). GD is supported by the Belgian Fund for Scientific Research (Fonds de la Recherche Scientifique \u2013FNRS).
WHO. Fact sheet, HIV and AIDS (2024). Available online at: https://www.who.int/news-room/fact-sheets/detail/hiv-aids (Accessed January 2025).
Deeks SG Lewin SR Havlir DV. The end of AIDS: HIV infection as a chronic disease. Lancet. (2013) 382:1525–33. doi: 10.1016/S0140-6736(13)61809-7, PMID: 24152939
Trickey A Sabin CA Burkholder G Crane H d’Arminio Monforte A Egger M et al. Life expectancy after 2015 of adults with HIV on long-term antiretroviral therapy in Europe and North America: a collaborative analysis of cohort studies. Lancet HIV. (2023) 10:e295–307. doi: 10.1016/S2352-3018(23)00028-0, PMID: 36958365
Hunt PW. HIV and inflammation: mechanisms and consequences. Curr HIV/AIDS Rep. (2012) 9:139–47. doi: 10.1007/s11904-012-0118-8, PMID: 22528766
Wilson EMP Sereti I. Immune restoration after antiretroviral therapy: the pitfalls of hasty or incomplete repairs. Immunol Rev. (2013) 254:343–54. doi: 10.1111/imr.12064, PMID: 23772630
Yang X Su B Zhang X Liu Y Wu H Zhang T. Incomplete immune reconstitution in HIV/AIDS patients on antiretroviral therapy: Challenges of immunological non-responders. J Leukoc Biol. (2020) 107:597–612. doi: 10.1002/JLB.4MR1019-189R, PMID: 31965635
Hileman CO Funderburg NT. Inflammation, immune activation, and antiretroviral therapy in HIV. Curr HIV/AIDS Rep. (2017) 14:93–100. doi: 10.1007/s11904-017-0356-x, PMID: 28434169
Sokoya T Steel HC Nieuwoudt M Rossouw TM. HIV as a cause of immune activation and immunosenescence. Mediators Inflammation. (2017) 2017:6825493. doi: 10.1155/2017/6825493, PMID: 29209103
Younas M Psomas C Reynes J Corbeau P. Immune activation in the course of HIV-1 infection: Causes, phenotypes and persistence under therapy. HIV Med. (2016) 17:89–105. doi: 10.1111/hiv.12310, PMID: 26452565
Siliciano JD Siliciano RF. In vivo dynamics of the latent reservoir for HIV-1: new insights and implications for cure. Annu Rev Pathol. (2022) 17:271–94. doi: 10.1146/annurev-pathol-050520-112001, PMID: 34736342
Pasternak AO Berkhout B. HIV persistence: silence or resistance? Curr Opin Virol. (2023) 59:101301. doi: 10.1016/j.coviro.2023.101301, PMID: 36805974
Klatt NR Chomont N Douek DC Deeks SG. Immune activation and HIV persistence: implications for curative approaches to HIV infection. Immunol Rev. (2013) 254:326–42. doi: 10.1111/imr.12065, PMID: 23772629
Massanella M Fromentin R Chomont N. Residual inflammation and viral reservoirs: alliance against an HIV cure. Curr Opin HIV AIDS. (2016) 11:234. doi: 10.1097/COH.0000000000000230, PMID: 26575148
Martinez-Picado J Deeks SG. Persistent HIV-1 replication during antiretroviral therapy. Curr Opin HIV AIDS. (2016) 11:417–23. doi: 10.1097/COH.0000000000000287, PMID: 27078619
Zicari S Sessa L Cotugno N Ruggiero A Morrocchi E Concato C et al. Immune activation, inflammation, and non-AIDS co-morbidities in HIV-infected patients under long-term ART. Viruses. (2019) 11:200. doi: 10.3390/v11030200, PMID: 30818749
Lv T Cao W Li T. HIV-related immune activation and inflammation: current understanding and strategies. J Immunol Res. (2021) 2021:7316456. doi: 10.1155/2021/7316456, PMID: 34631899
De Voeght A Martens H Renard C Vaira D Debruche M Simonet J et al. Exploring the link between innate immune activation and thymic function by measuring sCD14 and TRECs in HIV patients living in Belgium. PloS One. (2017) 12:e0185761. doi: 10.1371/journal.pone.0185761, PMID: 29049344
Streeck H Maestri A Habermann D Crowell TA Esber AL Son G et al. Dissecting drivers of immune activation in chronic HIV-1 infection. EBioMedicine. (2022) 83:104182. doi: 10.1016/j.ebiom.2022.104182, PMID: 35905559
Fromentin R Bakeman W Lawani MB Khoury G Hartogensis W DaFonseca S et al. CD4+ T cells expressing PD-1, TIGIT and LAG-3 contribute to HIV persistence during ART. PloS Pathog. (2016) 12:e1005761. doi: 10.1371/journal.ppat.1005761, PMID: 27415008
Chiu CY Schou MD McMahon JH Deeks SG Fromentin R Chomont N et al. Soluble immune checkpoints as correlates for HIV persistence and T cell function in people with HIV on antiretroviral therapy. Front Immunol. (2023) 14:1123342. doi: 10.3389/fimmu.2023.1123342, PMID: 37056754
Naidoo KK Ndumnego OC Ismail N Dong KL Ndung’u T. Antigen presenting cells contribute to persistent immune activation despite antiretroviral therapy initiation during hyperacute HIV-1 infection. Front Immunol. (2021) 12. doi: 10.3389/fimmu.2021.738743, PMID: 34630420
Muñoz-Muela E Trujillo-Rodríguez M Serna-Gallego A Saborido-Alconchel A Gasca-Capote C Álvarez-Ríos A et al. HIV-1-DNA/RNA and immunometabolism in monocytes: contribution to the chronic immune activation and inflammation in people with HIV-1. EBioMedicine. (2024) 108:105338. doi: 10.1016/j.ebiom.2024.105338, PMID: 39265504
Guaraldi G Orlando G Zona S Menozzi M Carli F Garlassi E et al. Premature age-related comorbidities among HIV-infected persons compared with the general population. Clin Infect Dis. (2011) 53:1120–6. doi: 10.1093/cid/cir627, PMID: 21998278
Aberg JA. Aging, inflammation, and HIV infection. Top Antivir Med. (2012) 20:101–5.
Chen J Titanji K Sheth AN Gandhi R McMahon D Ofotokun I et al. The effect of age on CD4+ T-cell recovery in HIV-suppressed adult participants: a sub-study from AIDS Clinical Trial Group (ACTG) A5321 and the Bone Loss and Immune Reconstitution (BLIR) study. Immun Ageing. (2022) 19:4. doi: 10.1186/s12979-021-00260-x, PMID: 34980186
Mazzuti L Turriziani O Mezzaroma I. The many faces of immune activation in hiv-1 infection: a multifactorial interconnection. Biomedicines. (2023) 11:159. doi: 10.3390/biomedicines11010159, PMID: 36672667
Scully EP Gandhi M Johnston R Hoh R Lockhart A Dobrowolski C et al. Sex-based differences in human immunodeficiency virus type 1 reservoir activity and residual immune activation. J Infect Dis. (2019) 219:1084–94. doi: 10.1093/infdis/jiy617, PMID: 30371873
Mihealsick E Word A Scully EP. The impact of sex on HIV immunopathogenesis and therapeutic interventions. J Clin Invest. (2024) 134:e180075. doi: 10.1172/JCI180075, PMID: 39286972
Fombellida-Lopez C Valaitienė A Winchester L Maes N Dellot P Vanwinge C et al. Doubling dolutegravir dosage reduces the viral reservoir in ART-treated people with HIV. (2009). doi: 10.7554/eLife.106931.1
Fombellida-Lopez C Östling E Aguilar Ortmans D Dellot P Marechal N Vanwinge C et al. Impact of Abacavir Withdrawal from a Triple ART Regimen on HIV Reservoir and Systemic Inflammation: A Phase 3 Randomised Controlled Trial. SSRN Scholarly Paper. (2025). doi: 10.2139/ssrn.5264475
Chomont N El-Far M Ancuta P Trautmann L Procopio FA Yassine-Diab B et al. HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation. Nat Med. (2009) 15:893–900. doi: 10.1038/nm.1972, PMID: 19543283
Khoury G Fromentin R Solomon A Hartogensis W Killian M Hoh R et al. Human immunodeficiency virus persistence and T-cell activation in blood, rectal, and lymph node tissue in human immunodeficiency virus–infected individuals receiving suppressive antiretroviral therapy. J Infect Dis. (2017) 215:911–9. doi: 10.1093/infdis/jix039, PMID: 28453847
Hatano H Jain V Hunt PW Lee T-H Sinclair E Do TD et al. Cell-based measures of viral persistence are associated with immune activation and programmed cell death protein 1 (PD-1)–expressing CD4+ T cells. J Infect Dis. (2013) 208:50–6. doi: 10.1093/infdis/jis630, PMID: 23089590
Cockerham LR Siliciano JD Sinclair E O’Doherty U Palmer S Yukl SA et al. CD4+ and CD8+ T cell activation are associated with HIV DNA in resting CD4+ T cells. PloS One. (2014) 9:e110731. doi: 10.1371/journal.pone.0110731, PMID: 25340755
Olson A Coote C Snyder-Cappione JE Lin N Sagar M. HIV-1 transcription but not intact provirus levels are associated with systemic inflammation. J Infect Dis. (2021) 223:1934–42. doi: 10.1093/infdis/jiaa657, PMID: 33075121
Scherpenisse M Kootstra NA Bakker M Berkhout B Pasternak AO. Cell-associated HIV-1 unspliced-to-multiply-spliced RNA ratio at 12 weeks of ART predicts immune reconstitution on therapy. mBio. (2021) 12:e00099–21. doi: 10.1128/mBio.00099-21, PMID: 33688002
Eastburn A Scherzer R Zolopa AR Benson C Tracy R Do T et al. Association of low level viremia with inflammation and mortality in HIV-infected adults. PloS One. (2011) 6:e26320. doi: 10.1371/journal.pone.0026320, PMID: 22073156
Reus S Portilla J Sánchez-Payá J Giner L Francés R Such J et al. Low-level HIV viremia is associated with microbial translocation and inflammation. J Acquir Immune Defic Syndr. (2013) 62:129–34. doi: 10.1097/QAI.0b013e3182745ab0, PMID: 23018379
Younas M Psomas C Reynes C Cezar R Kundura L Portalès P et al. Residual viremia is linked to a specific immune activation profile in HIV-1-infected adults under efficient antiretroviral therapy. Front Immunol. (2021) 12:663843. doi: 10.3389/fimmu.2021.663843, PMID: 33859653
Riddler SA Aga E Bosch RJ Bastow B Bedison M Vagratian D et al. Continued slow decay of the residual plasma viremia level in HIV-1-infected adults receiving long-term antiretroviral therapy. J Infect Dis. (2016) 213:556–60. doi: 10.1093/infdis/jiv433, PMID: 26333941
Falasca F Carlo DD Vito CD Bon I d’Ettorre G Fantauzzi A et al. Evaluation of HIV-DNA and inflammatory markers in HIV-infected individuals with different viral load patterns. BMC Infect Dis. (2017) 17:581. doi: 10.1186/s12879-017-2676-2, PMID: 28830393
Buzon MJ Massanella M Llibre JM Esteve A Dahl V Puertas MC et al. HIV-1 replication and immune dynamics are affected by raltegravir intensification of HAART-suppressed subjects. Nat Med. (2010) 16:460–5. doi: 10.1038/nm.2111, PMID: 20228817
Yukl SA Shergill AK McQuaid K Gianella S Lampiris H Hare CB et al. Effect of raltegravir-containing intensification on HIV burden and T-cell activation in multiple gut sites of HIV-positive adults on suppressive antiretroviral therapy. AIDS. (2010) 24:2451–60. doi: 10.1097/QAD.0b013e32833ef7bb, PMID: 20827162
Hatano H Strain MC Scherzer R Bacchetti P Wentworth D Hoh R et al. Increase in 2-long terminal repeat circles and decrease in D-dimer after raltegravir intensification in patients with treated HIV infection: a randomized, placebo-controlled trial. J Infect Dis. (2013) 208:1436–42. doi: 10.1093/infdis/jit453, PMID: 23975885
Llibre JM Buzón MJ Massanella M Esteve A Dahl V Puertas MC et al. Treatment intensification with raltegravir in subjects with sustained HIV-1 viraemia suppression: a randomized 48-week study. Antivir Ther. (2012) 17:355–64. doi: 10.3851/IMP1917, PMID: 22290239
Vallejo A Gutierrez C Hernandez-Novoa B Diaz L Madrid N Abad-Fernandez M et al. The effect of intensification with raltegravir on the HIV-1 reservoir of latently infected memory CD4 T cells in suppressed patients. AIDS. (2012) 26:1885–94. doi: 10.1097/QAD.0b013e3283584521, PMID: 22992577
Gutiérrez C Díaz L Vallejo A Hernández-Novoa B Abad M Madrid N et al. Intensification of antiretroviral therapy with a CCR5 antagonist in patients with chronic HIV-1 infection: effect on T cells latently infected. PloS One. (2011) 6:e27864. doi: 10.1371/journal.pone.0027864, PMID: 22174752
Puertas MC Massanella M Llibre JM Ballestero M Buzon MJ Ouchi D et al. Intensification of a raltegravir-based regimen with maraviroc in early HIV-1 infection. AIDS. (2014) 28:325–34. doi: 10.1097/QAD.0000000000000066, PMID: 24185044
Puertas MC Gómez-Mora E Santos JR Molto J Urrea V Morón-López S et al. Impact of intensification with raltegravir on HIV-1-infected individuals receiving monotherapy with boosted PIs. J Antimicrob Chemother. (2018) 73:1940–8. doi: 10.1093/jac/dky106, PMID: 29635527
Dinoso JB Kim SY Wiegand AM Palmer SE Gange SJ Cranmer L et al. Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy. Proc Natl Acad Sci U.S.A. (2009) 106:9403–8. doi: 10.1073/pnas.0903107106, PMID: 19470482
McMahon D Jones J Wiegand A Gange SJ Kearney M Palmer S et al. Short-course raltegravir intensification does not reduce persistent low-level viremia in patients with HIV-1 suppression during receipt of combination antiretroviral therapy. Clin Infect Dis. (2010) 50:912–9. doi: 10.1086/650749, PMID: 20156060
Gandhi RT Zheng L Bosch RJ Chan ES Margolis DM Read S et al. The effect of raltegravir intensification on low-level residual viremia in HIV-infected patients on antiretroviral therapy: a randomized controlled trial. PloS Med. (2010) 7:e1000321. doi: 10.1371/journal.pmed.1000321, PMID: 20711481
Gandhi RT Coombs RW Chan ES Bosch RJ Zheng L Margolis DM et al. No effect of raltegravir intensification on viral replication markers in the blood of HIV-1-infected patients receiving antiretroviral therapy. J Acquir Immune Defic Syndr. (2012) 59:229–35. doi: 10.1097/QAI.0b013e31823fd1f2, PMID: 22083073
Cillo AR Hilldorfer BB Lalama CM McKinnon JE Coombs RW Tenorio AR et al. Virologic and immunologic effects of adding maraviroc to suppressive antiretroviral therapy in individuals with suboptimal CD4+ T-cell recovery. AIDS. (2015) 29:2121–9. doi: 10.1097/QAD.0000000000000810, PMID: 26544577
Chaillon A Gianella S Lada SM Perez-Santiago J Jordan P Ignacio C et al. Size, composition, and evolution of HIV DNA populations during early antiretroviral therapy and intensification with maraviroc. J Virol. (2018) 92:e01589–17. doi: 10.1128/JVI.01589-17, PMID: 29142136
Rasmussen TA McMahon JH Chang JJ Audsley J Rhodes A Tennakoon S et al. The effect of antiretroviral intensification with dolutegravir on residual virus replication in HIV-infected individuals: a randomised, placebo-controlled, double-blind trial. Lancet HIV. (2018) 5:e221–30. doi: 10.1016/S2352-3018(18)30040-7, PMID: 29643011
Steel A Cox AE Shamji MH John L Nelson M Henderson DC et al. HIV-1 viral replication below 50 copies/ml in patients on antiretroviral therapy is not associated with CD8+ T-cell activation. Antivir Ther. (2007) 12:971–5. doi: 10.1177/135965350701200613, PMID: 17926652
Chun T-W Murray D Justement JS Hallahan CW Moir S Kovacs C et al. Relationship between residual plasma viremia and the size of HIV proviral DNA reservoirs in infected individuals receiving effective antiretroviral therapy. J Infect Dis. (2011) 204:135–8. doi: 10.1093/infdis/jir208, PMID: 21628667
Mexas AM Graf EH Pace MJ Yu JJ Papasavvas E Azzoni L et al. Concurrent measures of total and integrated HIV DNA monitor reservoirs and ongoing replication in eradication trials. AIDS. (2012) 26:2295–306. doi: 10.1097/QAD.0b013e32835a5c2f, PMID: 23014521
Allavena C Rodallec A Sécher S Reliquet V Baffoin S André-Garnier E et al. Evaluation of residual viremia and quantitation of soluble CD14 in a large cohort of HIV-infected adults on a long-term non-nucleoside reverse transcriptase inhibitor-based regimen. J Med Virol. (2013) 85:1878–82. doi: 10.1002/jmv.23679, PMID: 23861166
Poizot-Martin I Faucher O Obry-Roguet V Nicolino-Brunet C Ronot-Bregigeon S Dignat-George F et al. Lack of correlation between the size of HIV proviral DNA reservoir and the level of immune activation in HIV-infected patients with a sustained undetectable HIV viral load for 10 years. J Clin Virol. (2013) 57:351–5. doi: 10.1016/j.jcv.2013.04.007, PMID: 23664725
Guihot A Dentone C Assoumou L Parizot C Calin R Seang S et al. Residual immune activation in combined antiretroviral therapy-treated patients with maximally suppressed viremia. AIDS. (2016) 30:327–30. doi: 10.1097/QAD.0000000000000815, PMID: 26186129
Gandhi RT McMahon DK Bosch RJ Lalama CM Cyktor JC Macatangay BJ et al. Levels of HIV-1 persistence on antiretroviral therapy are not associated with markers of inflammation or activation. PloS Pathog. (2017) 13:e1006285. doi: 10.1371/journal.ppat.1006285, PMID: 28426825
Bailón L Puertas MC García-Guerrero MC Moraes-Cardoso I Aparicio E Alarcón-Soto Y et al. Impact of dolutegravir plus lamivudine as first-line antiretroviral treatment on HIV-1 reservoir and inflammatory markers in peripheral blood. J Infect Dis. (2024) 231:jiae530. doi: 10.1093/infdis/jiae530, PMID: 39465671
Vassallo M Durant J Fabre R Lotte L Sindt A Puchois A et al. Inflammatory markers after switching to a dual drug regimen in HIV-infected subjects: A two-year follow-up. Viruses. (2022) 14:927. doi: 10.3390/v14050927, PMID: 35632669
Wang R Underwood M Llibre JM Bernal Morell E Brinson C Sanz Moreno J et al. Very-low-level viremia, inflammatory biomarkers, and associated baseline variables: three-year results of the randomized TANGO study. Open Forum Infect Dis. (2024) 11:ofad626. doi: 10.1093/ofid/ofad626, PMID: 38213637
Llibre JM Cahn PE Lo J Barber TJ Mussini C van Welzen BJ et al. Changes in inflammatory and atherogenesis biomarkers with the 2-drug regimen dolutegravir plus lamivudine in antiretroviral therapy-experienced, virologically suppressed people with HIV-1: A systematic literature review. Open Forum Infect Dis. (2022) 9:ofac068. doi: 10.1093/ofid/ofac068, PMID: 35265729
Llibre JM López Cortés LF Aylott A Wynne B Matthews J Van Solingen-Ristea R et al. Brief report: evaluation of inflammation and atherogenesis biomarkers through 148 weeks postswitch to dolutegravir and rilpivirine in SWORD-1/SWORD-2. J Acquir Immune Defic Syndr. (2022) 91:73–8. doi: 10.1097/QAI.0000000000003019, PMID: 35551149
Marras F Casabianca A Bozzano F Ascierto ML Orlandi C Di Biagio A et al. Control of the HIV-1 DNA reservoir is associated in vivo and in vitro with NKp46/NKp30 (CD335 CD337) inducibility and interferon gamma production by transcriptionally unique NK cells. J Virol. (2017) 91:e00647–17. doi: 10.1128/JVI.00647-17, PMID: 28956765
Hartana CA Garcia-Broncano P Rassadkina Y Lian X Jiang C Einkauf KB et al. Immune correlates of HIV-1 reservoir cell decline in early-treated infants. Cell Rep. (2022) 40:111126. doi: 10.1016/j.celrep.2022.111126, PMID: 35858580
Garcia-Broncano P Maddali S Einkauf KB Jiang C Gao C Chevalier J et al. Early antiretroviral therapy in neonates with HIV-1 infection restricts viral reservoir size and induces a distinct innate immune profile. Sci Transl Med. (2019) 11:eaax7350. doi: 10.1126/scitranslmed.aax7350, PMID: 31776292
Ivison GT Vendrame E Martínez-Colón GJ Ranganath T Vergara R Zhao NQ et al. Natural killer cell receptors and ligands are associated with markers of HIV-1 persistence in chronically infected ART suppressed patients. Front Cell Infect Microbiol. (2022) 12:757846. doi: 10.3389/fcimb.2022.757846, PMID: 35223535
Gálvez C Urrea V Dalmau J Jimenez M Clotet B Monceaux V et al. Extremely low viral reservoir in treated chronically HIV-1-infected individuals. EBioMedicine. (2020) 57:102830. doi: 10.1016/j.ebiom.2020.102830, PMID: 32580136
Gärtner K Domínguez-Rodríguez S Heaney J Gkouleli T Grant P Dorgham K et al. Low unspliced cell-associated HIV RNA in early treated adolescents living with HIV on long suppressive ART. Front Immunol. (2024) 15. doi: 10.3389/fimmu.2024.1334236, PMID: 38444847
González-Navarro I Urrea V Gálvez C Garcia-Guerrero MDC Morón-López S Puertas MC et al. Assessing advances in three decades of clinical antiretroviral therapy on the HIV-1 reservoir. J Clin Invest. (2024) 135:e183952. doi: 10.1172/JCI183952, PMID: 39610346
Lian X Seiger KW Parsons EM Gao C Sun W Gladkov GT et al. Progressive transformation of the HIV-1 reservoir cell profile over two decades of antiviral therapy. Cell Host Microbe. (2023) 31:83–96.e5. doi: 10.1016/j.chom.2022.12.002, PMID: 36596305
Pinzone MR VanBelzen DJ Weissman S Bertuccio MP Cannon L Venanzi-Rullo E et al. Longitudinal HIV sequencing reveals reservoir expression leading to decay which is obscured by clonal expansion. Nat Commun. (2019) 10:728. doi: 10.1038/s41467-019-08431-7, PMID: 30760706
Cho A Gaebler C Olveira T Ramos V Saad M Lorenzi JCC et al. Longitudinal clonal dynamics of HIV-1 latent reservoirs measured by combination quadruplex polymerase chain reaction and sequencing. Proc Natl Acad Sci U.S.A. (2022) 119:e2117630119. doi: 10.1073/pnas.2117630119, PMID: 35042816
Armani-Tourret M Bone B Tan TS Sun W Bellefroid M Struyve T et al. Immune targeting of HIV-1 reservoir cells: a path to elimination strategies and cure. Nat Rev Microbiol. (2024) 22:328–44. doi: 10.1038/s41579-024-01010-8, PMID: 38337034
Wiesmann F Braun P Knickmann M Knechten H. Low level HIV viremia is more frequent under protease-inhibitor containing firstline therapy than under NNRTI-regimens. J Int AIDS Soc. (2014) 17:19828. doi: 10.7448/IAS.17.4.19828, PMID: 25397572
Darcis G Maes N Pasternak AO Sauvage A-S Frippiat F Meuris C et al. Detectability of HIV residual viremia despite therapy is highly associated with treatment with a protease inhibitor-based combination antiretroviral therapy. Antimicrob Agents Chemother. (2020) 64:e01902–19. doi: 10.1128/AAC.01902-19, PMID: 31818822
Darcis G Berkhout B Pasternak AO. Differences in HIV markers between infected individuals treated with different ART regimens: implications for the persistence of viral reservoirs. Viruses. (2020) 12:489. doi: 10.3390/v12050489, PMID: 32349381
Ishizaka A Koga M Mizutani T Suzuki Y Matano T Yotsuyanagi H et al. Sustained gut dysbiosis and intestinal inflammation show correlation with weight gain in person with chronic HIV infection on antiretroviral therapy. BMC Microbiol. (2024) 24:274. doi: 10.1186/s12866-024-03431-0, PMID: 39044127
Mac Cann R Newman E Devane D Sabin C Cotter AG Landay A et al. HIV, the gut microbiome and clinical outcomes, a systematic review. PloS One. (2024) 19:e0308859. doi: 10.1371/journal.pone.0308859, PMID: 39652612