Geographical allozymes differentiation in wild Phaseolus lunatus L. of the Central Valley of Costa Rica and its implications for conservation and management of populations
Zoro Bi, I.; Baudoin, Jean-Pierre
2007 • In Biotechnologie, Agronomie, Société et Environnement, 11 (4), p. 287-297
Geographical allozymes differentiation in wild Phaseolus lunatus L. of the Central Valley of Costa Rica and its implications for conservation and management of populations
Publication date :
2007
Journal title :
Biotechnologie, Agronomie, Société et Environnement
ISSN :
1370-6233
eISSN :
1780-4507
Publisher :
Presses Agronomiques de Gembloux, Gembloux, Belgium
Allard RW., Workman PL. (1963). Population studies in predominantly self-pollinated species. I V. Seasonal fluctuations in estimated values of genetic parameters in Lima bean populations. Evolution 17, p. 470–480.
Alvarez-Buylla ER., Chaos Á., Piñero D., Garay AA. (1996). Demographic genetics of a pioneer tropical tree species: patch dynamics, seed dispersal and seed banks. Evolution 50 (3), p. 1155–1166.
Amos B., Hoelzel AR. (1992). Applications of molecular genetic techniques to the conservation of small populations. Biol. Cons. 61, p. 133–144.
Barbujani G. (1987). Autocorrelation of gene frequencies under isolation by distance. Genetics 117, p. 777–782.
Baudoin JP., Degreef J., Hardy O., Janart F., Zoro Bi I. (1998). Development of an in situ conservation strategy for wild Lima bean (Phaseolus lunatus L.) populations in the central valley of Costa Rica. In Owens SJ., Rudall PJ. Reproduction biology. Kew, England: Royal Botanic Gardens, p. 417–426.
Cliff AD., Ord JK. (1973). Spatial autocorrelation. London: Pion Limited, 178 p.
Crow JF., Aoki K. (1984). Group selection for a polygenic behavioral trait: estimating the degree of population subdivision. Proc. Natl Acad. Sci. USA 81, p. 6073–6077.
Degreef J., Baudoin JP., Rocha OJ. (1997). Case studies on breeding systems and its consequences for germplasm conservation. 2. Demography of wild Lima bean populations in the central valley of Costa Rica. Genet. Resour. Crop. Evol. 44, p. 429–438.
Degreef J., Rocha OJ., Vanderborght T., Baudoin JP. (2002). Soil seed bank and seed dormancy in wild populations of Lima bean (Fabaceae): considerations for in situ and ex situ conservation. Am. J. Bot. 89 (10), p. 1644–1650.
Ennos RA. (1990). Detection and measurement of selection: genetic and ecological approaches. In Brown AHD., Clegg MT., Kalher AL., Weir BS. Plant population genetics, breeding, and genetic resources. Sunderland, Massachusetts, USA: Sinauer Associates Inc., p. 200–214.
Epperson BK. (1990). Spatial autocorrelation of genotypes under directional selection. Genetics 124, p. 757–771.
Escudero A., Iriondo JM., Torres ME. (2003). Spatial analysis of genetic diversity as a tool for plant conservation. Biol. Cons. 113 (3), p. 351–365.
Francisco-Ortega J., Santos-Guerra A., Kim SC., Crawford DJ. (2000). Plant genetic diversity in the Canary Islands: a conservation perspective. Am. J. Bot. 87, p. 909–919.
Gabriel KR., Sokal RR. (1969). A new statistical approach to geographic variation analysis. Syst. Zool. 18, p. 259–278.
Grassi F., Imazio S., Gomarasca S., Citterio S., Aina R., Sgorbati S., Sala F., Patrignani G., Labra M. (2004). Population structure and genetic variation within Valeriana wallrothii Kreyer in relation to different ecological locations. Plant Sci. 116, p. 1437–1441.
Guerrant EO Jr. (1992). Genetic and demographic considerations in the sampling and reintroduction of rare plants. In Fiedler PL., Jain SK. Conservation biology: the theory and practice of nature conservation, preservation and management. London: Chapman and Hall, p. 321–344.
Hamrick JL., Allard RW. (1972). Microgeographical variation in allozyme frequencies in Avena barbata. Proc. Natl Acad. Sci. USA 69 (8), p. 2100–2104.
Hamrick JL., Godt JW. (1990). Allozyme diversity in plant species. In Brown AHD., Clegg MT., Kalher AL., Weir BS. Plant population genetics, breeding and genetic resources. Sunderland, Massachusetts, USA: Sinauer Associates Inc., p. 43–63.
Hamrick JL., Godt MJW., Murawski DA., Loveless MD. (1991). Correlations between species traits and allozyme diversity: implications for conservation biology. In Falk DA., Holsinger KE. Genetics and conservation of rare plants. Oxford, UK: Oxford University Press, p. 75–86.
Hardy O., Dubois S., Zoro Bi I., Baudoin JP. (1997). Gene dispersal and its consequences on the genetic structure of wild populations of Lima bean (Phaseolus lunatus) in Costa Rica. Plant Genet. Resour. Newsl. 109, p. 1–6.
He T., Rao G., You R., Ge S., Hong D. (2000). Spatial autocorrelation of genetic variation in three stands of Ophiopogon xylorrhizus (Liliaceae s.l.). Ann. Bot. 86, p. 113–121.
Heywood JS. (1991). Spatial analysis of genetic variation in plant populations. Annu. Rev. Ecol. Syst. 22, p. 335–355.
Imam AG., Allard RW. (1965). Population studies in predominantly self-pollinated species. VI. Genetic variability between and within natural populations of wild oats from differing habitats in California. Genetics 51, p. 49–62.
Legendre P., Fortin MJ. (1989). Spatial pattern and ecological analysis. Vegetatio 80, p. 107–138.
Levin SA. (1974). Distribution and population interactions. Am. Nat. 108 (960), p. 207–229.
Loveless MD., Hamrick JL. (1984). Ecological determinants of genetic structure in plant populations. Annu. Rev.Ecol. Syst. 15, p. 65–95.
Maquet A., Baudoin JP. (1997). Aperçu de la distribution néotropicale de Phaseolus lunatus. Belg. J. Bot. 130 (1), p. 93–116.
Meurrens F., Degreef J., Rocha OJ., Baudoin JP. (2001). Demographic study in micro-conservation sites with a view to maintaining in situ wild Lima beans (Phaseolus lunatus L.) in the Central Valley of Costa Rica. Plant Genet. Resour. Newsl. 128, p. 45–50.
Moran PAP. (1950). Notes on continuous stochastic phenomena. Biometrika 37, p. 17–23.
Nevo E., Golenberg EM., Bieles A., Brown AHD., Zohary D. (1982). Genetic diversity and environmental association of wild wheat, Triticum diccocoides in Israel. Theor. Appl. Genet. 62, p. 241–254.
Nevo E., Beiles A., Kaplan D., Golenberg EM., Olsvig-Whittaker L., Naveh Z. (1986). Natural selection of allozyme polymorphisms: a microsite test revealing ecological genetic differentiation in wild barley. Evolution 40 (1), p. 13–20.
Oostermeijer JGB., van Eijck MW., den Nijs JCM. (1994). Offspring fitness in relation to population size and genetic variation in the rare perennial plant species Gentiana pneumonanthe (Gentianaceae). Oecologia 97, p. 289–296.
Oostermeijer JGB., Luijten SH., den Nijs JCM. (2003). Integrating demographic and genetic approaches in plant conservation. Biol. Cons. 113 (3), p. 389–398.
Ouédraogo M., Maquet A., Baudoin JP. (2005). Étude comparative de la diversité et de la structure génétique de populations sauvages de Phaseolus lunatus L. à l’aide des marqueurs enzymatiques et microsatellites. Biotechnol. Agron. Soc. Environ. 9 (3), p. 195–205.
Raymond M., Rousset F. (1995). Genepop (Version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86 (3), p. 248–249.
Rocha OJ., Macaya G., Baudoin JP. (1997). Causes of local extinction and recolonization, determined by 3 years of monitoring wild populations of Phaseolus lunatus L. in the central valley of Costa Rica. Plant Genet. Resour. Newsl. 112, p. 44-48.
Schaal BA., Levin DA. (1976). The demographic genetics of Liatris cylindricaea Michx. (Compositae). Am. Nat. 110, p. 191–206.
Schaal BA., O’Kane Jr SL., Rogstad SH. (1991). DNA variation in plant populations. Trends Ecol. Evol. 6 (10), p. 329–333.
Slatkin M. (1985). Gene flow in natural populations. Annu. Rev. Ecol. Syst. 16, p. 393–430.
Slatkin M. (1987). Gene flow and the geographic structure of natural populations. Science 236, p. 787–792.
Sokal RR., Oden NL. (1978a). Spatial autocorrelation in biology: 1. Methodology. Biol. J. Linn. Soc. 10, p. 199–228.
Sokal RR., Oden NL. (1978b). Spatial autocorrelation in biology: 2. Some biological implications and four applications of evolutionary and ecological interest. Biol. J. Linn. Soc. 10, p. 229–249.
Sokal RR., Rohlf FJ. (1995). Biometry. New York: Freeman, W.H. and Company, 776 p.
Vekemans X., Hardy O. (2004). New insights from fine-scalespatial genetic structure analyses in plant populations. Mol. Ecol. 13 (4), p. 921–935.
Wade MJ., McCauley DE. (1988). Extinction and recolonization: their effects on the genetic differentiation of local populations. Evolution 42 (5), p. 995–1005.
Wartenberg D. (1989). Spatial autocorrelation analysis programm (SAAP). Piscataway (NJ), USA: Rutgers University.
Weir BS., Cockerham CC. (1984). Estimating F-statistics for the analysis of population structure. Evolution 38 (6), p. 1358–1370.
Widén B. (1993). Demographic and genetic effects on reproduction as related to population size in a rare, perennial herb, Senecio integrifolius (Asteraceae). Biol. J. Linn. Soc. 50, p. 179–195.
Wilson I. (2004). Spatial population genetics. Trends Ecol. Evol. 19 (5), p. 229–230.
Wright S. (1931). Evolution in mendelian population. Genetics 16, p. 97–159.
Wright S. (1951). The genetical structure of populations. Ann. Eugenet. 15, p. 323–354.
Zoro Bi I., Maquet A., Baudoin JP. (1997). Spatial patterns of allozyme variants within three wild populations of Phaseolus lunatus L. from the central valley of Costa Rica. Belg. J. Bot. 129 (2), p. 149–155.
Zoro Bi I., Maquet A., Degreef J., Wathelet B., Baudoin JP. (1998). Sample size for collecting seeds in germplasm conservation: case of the Lima bean (Phaseolus lunatus L.). Theor. Appl. Genet. 97 (1–2), p. 187–194.
Zoro Bi I., Maquet A., Baudoin JP. (1999). Genetic control of isozymes in the gene pool Phaseolus lunatus L. Biotechnol. Agron. Soc. Environ. 3 (1), p. 10–27.
Zoro Bi I., Maquet A., Baudoin JP. (2003). Population genetic structure of wild Phaseolus lunatus (Fabaceae), with special reference to population sizes. Am. J. Bot. 90(6), p. 897–904.
Zoro Bi I., Maquet A., Baudoin JP. (2004). Mating system of wild Phaseolus lunatus L. and its relationship to population size. Heredity 92 (2), p. 153–158.
