Ibrahim D (2015) Effect of agitation speed on the morphology of Aspergillus niger HFD5A-1 hyphae and its pectinase production in submerged fermentation. World J Biol Chem. 10.4331/wjbc.v6.i3.265
Couto SR, Sanromán MÁ (2006) Application of solid-state fermentation to food industry—a review. J Food Eng. 10.1016/j.jfoodeng.2005.05.022
Marcial J, Barrios-González J, Tomasini A (2006) Effect of medium composition on pentachlorophenol removal by Amylomyces rouxii in solid-state culture. Process Biochem 41:496–500. 10.1016/j.procbio.2005.07.010
Bhargav S, Panda BP, Ali M, Javed S (2008) Solid-state fermentation: an overview. Chem Biochem Eng Q 22:49–70
Gamarra NN, Villena GK, Gutiérrez-Correa M (2010) Cellulase production by Aspergillus niger in biofilm, solid-state, and submerged fermentations. Appl Microbiol Biotechnol. 10.1007/s00253-010-2540-4
Zune Q, Telek S, Calvo S et al (2016) Influence of liquid phase hydrodynamics on biofilm formation on structured packing: optimisation of surfactin production from Bacillus amyloliquefaciens. Chem Eng Sci. 10.1016/j.ces.2016.08.023
Linder MB, Szilvay GR, Nakari-Setälä T, Penttilä ME (2005) Hydrophobins: the protein-amphiphiles of filamentous fungi
Wösten HA (2001) Hydrophobins: multipurpose proteins. Annu Rev Microbiol 55:625–646. 10.1146/annurev.micro.55.1.625
Ritva S, Torkkeli M, Paananen A et al (2003) Self-assembled structures of hydrophobins HFBI and HFBII. J Appl Crystallogr 36:499–502. 10.1107/S0021889803000578
Paananen A, Vuorimaa E, Torkkeli M et al (2003) Structural hierarchy in molecular films of two class II hydrophobins. Biochemistry 42:5253–5258. 10.1021/bi034031t
Laaksonen P, Kainlauri M, Laaksonen T et al (2010) Interfacial engineering by proteins: exfoliation and functionalization of graphene by hydrophobins. Angew Chemie Int Ed 49:4946–4949. 10.1002/anie.201001806
Reger MH (2011) Unique Emulsions based on recombinant Hydrophobins Dissertation
Cox AR, Aldred DL, Russell AB (2009) Exceptional stability of food foams using class II hydrophobin HFBII. Food Hydrocoll 23:366–376. 10.1016/j.foodhyd.2008.03.001
Zampieri F, Wösten HABB, Scholtmeijer K (2010) Creating surface properties using a palette of hydrophobins. Materials (Basel) 3:4607–4625. 10.3390/ma3094607
Hou S, Li XX, Li XX, Feng X (2009) Coating of hydrophobins on three-dimensional electrospun poly(lactic-co-glycolic acid) scaffolds for cell adhesion. Biofabrication 1:035004. 10.1088/1758-5082/1/3/035004
Khalesi M, Mandelings N, Herrera-Malaver B et al (2015) Improvement of the retention of ocimene in water phase using Class II hydrophobin HFBII. Flavour Fragr J. 10.1002/ffj.3260
Coutte F, Lecouturier D, Dimitrov K, et al (2017) Microbial lipopeptide production and purification bioprocesses, current progress and future challenges. Biotechnol J
Rosche B, Li XZ, Hauer B et al (2009) Microbial biofilms: a concept for industrial catalysis? Trends Biotechnol 27:636–643. 10.1016/j.tibtech.2009.08.001
Nakari-Setälä T, Penttilä M (1995) Production of Trichoderma reesei cellulases on glucose-containing media. Appl Environ Microbiol 61:3650–3655
Azevedo NF, Pacheco AP, Keevil CW, Vieira MJ (2006) Adhesion of water stressed Helicobacter pylori to abiotic surfaces. J Appl Microbiol. 10.1111/j.1365-2672.2006.03029.x
Moreira JMR, Gomes LC, Simões M et al (2015) The impact of material properties, nutrient load and shear stress on biofouling in food industries. Food Bioprod Process 95:228–236. 10.1016/j.fbp.2015.05.011
Nečas D, Klapetek P (2012) Gwyddion: An open-source software for SPM data analysis. Cent Eur J Phys 10:181–188. 10.2478/s11534-011-0096-2
Azeredo J, Azevedo NF, Briandet R et al (2017) Critical review on biofilm methods. Crit Rev Microbiol 43:313–351. 10.1080/1040841X.2016.1208146
Harding MW, Marques LLRR, Howard RJ, Olson ME (2009) Can filamentous fungi form biofilms? Trends Microbiol 17:475–480. 10.1016/j.tim.2009.08.007
Khalesi M, Zune Q, Telek S et al (2014) Fungal biofilm reactor improves the productivity of hydrophobin HFBII. Biochem Eng J 88:171–178. 10.1016/j.bej.2014.05.001
Zune Q, Soyeurt D, Toye D et al (2014) High-energy X-ray tomography analysis of a metal packing biofilm reactor for the production of lipopeptides by\n Bacillus subtilis. J Chem Technol Biotechnol 89:382–390. 10.1002/jctb.4128
Webb JS, Van Der Mei HC, Nixon M et al (1999) Plasticizers increase adhesion of the deteriogenic fungus Aureobasidium pullulans to polyvinyl chloride. Appl Environ Microbiol 65:3575–3581
Bos R, Van Der Mei HC, Busscher HJ (1999) Physico-chemistry of initial microbial adhesive interactions—its mechanisms and methods for study. FEMS Microbiol Rev 23:179–230
Chen G, Strevett KA (2001) Impact of surface thermodynamics on bacterial transport. Environ Microbiol. 10.1046/j.1462-2920.2001.00181.x
Martinez LR, Casadevall A (2007) Cryptococcus neoformans biofilm formation depends on surface support and carbon source and reduces fungal cell susceptibility to heat, cold, and UV light. Appl Environ Microbiol 73:4592–4601. 10.1128/AEM.02506-06
Gomes LC, Silva LN, Simões M et al (2015) Escherichia coli adhesion, biofilm development and antibiotic susceptibility on biomedical materials. J Biomed Mater Res Part A 103:1414–1423. 10.1002/jbm.a.35277
Fonseca AP, Granja PL, Nogueira JA et al (2001) Staphylococcus epidermidis RP62A adhesion to chemically modified cellulose derivatives. J Mater Sci Mater Med. 10.1023/A:1011227915575
Treter J, Bonatto F, Krug C et al (2014) Washing-resistant surfactant coated surface is able to inhibit pathogenic bacteria adhesion. Appl Surf Sci. 10.1016/j.apsusc.2014.02.123
Sinde E, Carballo J (2000) Attachment of Salmonella spp and Listeria monocytogenes to stainless steel, rubber and polytetrafluorehtylene: the influence of free energy and the effect of commercial sanitizers. Food Microbiol 1:2. 10.1006/fmic.2000.0339
Husmark U, Rönner U (1993) Adhesion of bacillus cereus spores to different solid surfaces: cleaned or conditioned with various food agents. Biofouling. 10.1080/08927019309386243
Callow ME, Jennings AR, Brennan AB et al (2002) Microtopographic cues for settlement of zoospores of the green fouling alga Enteromorpha. Biofouling. 10.1080/08927010290014917
Dexter SC (1979) Influence of substratum critical surface tension on bacterial adhesion-in Situ studies. J Colloid Interface Sci 70:346–354
Pringle JH, Fletcher M (1983) Influence of substratum wettability on attachment of freshwater bacteria to solid surfaces. Appl Environ Microbiol 45:811–817
Moreira JMR, Ponmozhi J, Campos JBLM et al (2015) Micro- and macro-flow systems to study Escherichia coli adhesion to biomedical materials. Chem Eng Sci. 10.1016/j.ces.2014.12.054
Hong Z, Rong X, Cai P et al (2012) Initial adhesion of Bacillus subtilis on soil minerals as related to their surface properties. Eur J Soil Sci. 10.1111/j.1365-2389.2012.01460.x
Gross M, Zhao X, Mascarenhas V, Wen Z (2016) Effects of the surface physico-chemical properties and the surface textures on the initial colonization and the attached growth in algal biofilm. Biotechnol Biofuels 9:38. 10.1186/s13068-016-0451-z
Anselme K, Davidson P, Popa AM, et al (2010) The interaction of cells and bacteria with surfaces structured at the nanometre scale. Acta Materialia Inc.
Teughels W, Van Assche N, Sliepen I, Quirynen M (2006) Effect of material characteristics and/or surface topography on biofilm development. Clin Oral Implants Res. 10.1111/j.1600-0501.2006.01353.x
Nakaguma S, Matsumoto K, Hirata A et al (2003) Bacterial endophthalmitis following cataract surgery. Jpn J Clin Ophthalmol 57:1481–1485. 10.1007/7142
Villena GK, Gutiérrez-Correa M (2007) Morphological patterns of Aspergillus niger biofilms and pellets related to lignocellulolytic enzyme productivities. Lett Appl Microbiol 45:231–237. 10.1111/j.1472-765X.2007.02183.x
Jin Y, Samaranayake LP, Samaranayake Y, Yip HK (2004) Biofilm formation of Candida albicans is variably affected by saliva and dietary sugars. Arch Oral Biol 49:789–798. 10.1016/j.archoralbio.2004.04.011
Nakari-Setälä T, Aro N, Ilmén M et al (1996) Differential expression of the vegetative and spore-bound hydrophobins of Trichoderma reesei: cloning and characterization of the hfb2 gene. VTT Publ. https://doi.org/10.1111/j.1432-1033.1997.00415.x
Musoni M, Destain J, Thonart P et al (2015) Bioreactor design and implementation strategies for the cultivation of filamentous fungi and the production of fungal metabolites: from traditional methods to engineered systems. Biotechnol Agron Soc Env 19:430–442
Lie T (1977) Early dental plaque morphogenesis: a scanning electron microscope study using the hydroxyapatite splint model and a low-sucrose diet. J Periodontal Res. 10.1111/j.1600-0765.1977.tb00111.x
Nyvad B, Kilian M (1987) Microbiology of the early colonization of human enamel and root surfaces in vivo. Scand J Dent Res 95:369–380. 10.1111/j.1600-0722.1987.tb01844.x
Gharechahi M, Moosavi H, Forghani M (2012) Effect of surface roughness and materials composition. J Biomater Nanobiotechnol 03:541–546. 10.4236/jbnb.2012.324056
Pandey A, Rodríguez-León JA, Nigam P (2001) Solid-state fermentation in biotechnology. Fundam Appl Asiat Publ. 10.1016/j.vaccine.2017.06.029
Singhania RR, Patel AK, Soccol CR, Pandey A (2009) Recent advances in solid-state fermentation. Biochem Eng J 44:13–18. 10.1016/j.bej.2008.10.019
Zune Q, Delepierre A, Gofflot S et al (2015) A fungal biofilm reactor based on metal structured packing improves the quality of a Gla:GFP fusion protein produced by Aspergillus oryzae. Appl Microbiol Biotechnol 99:6241–6254. 10.1007/s00253-015-6608-z
Kochkodan V, Tsarenko S, Potapchenko N et al (2008) Adhesion of microorganisms to polymer membranes: a photobactericidal effect of surface treatment with TiO2. Desalination. 10.1016/j.desal.2007.01.042