Article (Scientific journals)
The Shepherds' Tale: A Genome-Wide Study across 9 Dog Breeds Implicates Two Loci in the Regulation of Fructosamine Serum Concentration in Belgian Shepherds
Forsberg, SK; Kierczak, M; Ljungvall, Ingrid et al.
2015In PLoS ONE
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Keywords :
GWAS; Canine; Diabetes
Abstract :
[en] Diabetes mellitus is a serious health problem in both dogs and humans. Certain dog breeds show high prevalence of the disease, whereas other breeds are at low risk. Fructosamine and glycated haemoglobin (HbA1c) are two major biomarkers of glycaemia, where serum concentrations reflect glucose turnover over the past few weeks to months. In this study, we searched for genetic factors influencing variation in serum fructosamine concentration in healthy dogs using data from nine dog breeds. Considering all breeds together, we did not find any genome-wide significant associations to fructosamine serum concentration. However, by performing breed-specific analyses we revealed an association on chromosome 3 (pcorrected ≈ 1:68 × 10-6) in Belgian shepherd dogs of the Malinois subtype. The associated region and its close neighbourhood harbours interesting candidate genes such as LETM1 and GAPDH that are important in glucose metabolism and have previously been implicated in the aetiology of diabetes mellitus. To further explore the genetics of this breed specificity, we screened the genome for reduced heterozygosity stretches private to the Belgian shepherd breed. This revealed a region with reduced heterozygosity that shows a statistically significant interaction (p = 0.025) with the association region on chromosome 3. This region also harbours some interesting candidate genes and regulatory regions but the exact mechanisms underlying the interaction are still unknown. Nevertheless, this finding provides a plausible explanation for breed-specific genetic effects for complex traits in dogs. Shepherd breeds are at low risk of developing diabetes mellitus. The findings in Belgian shepherds could be connected to a protective mechanism against the disease. Further insight into the regulation of glucose metabolism could improve diagnostic and therapeutic methods for diabetes mellitus.
Disciplines :
Genetics & genetic processes
Author, co-author :
Forsberg, SK
Kierczak, M
Ljungvall, Ingrid
Merveille, Anne-Christine  ;  Université de Liège - ULiège > Dép. clinique des animaux de compagnie et des équidés (DCA) > Pathologie médicale des petits animaux
Gouni, Vassiliki
Wiberg, Maria
Lundgren Willesen, Jacob
Hanas, S
Lequarré, Anne-Sophie
Mejer Sorensen, Louise
Tiret, Laurent
Mc Entee, Kathleen ;  Université de Liège - ULiège > Dép. clinique des animaux de compagnie et des équidés (DCA) > Pathologie médicale des petits animaux
Seppälä, E
Koch, Joorgen
Battaille, Géraldine
Lohi, Hannes
Fredholm, Merete
Chetboul, Valérie
Häggström, Jens
Carlborg, O
Lindblad-Toh, Kerstin
Höglund, Katja
More authors (12 more) Less
Language :
English
Title :
The Shepherds' Tale: A Genome-Wide Study across 9 Dog Breeds Implicates Two Loci in the Regulation of Fructosamine Serum Concentration in Belgian Shepherds
Publication date :
May 2015
Journal title :
PLoS ONE
eISSN :
1932-6203
Publisher :
Public Library of Science, United States - California
Peer reviewed :
Peer Reviewed verified by ORBi
European Projects :
FP7 - 201370 - LUPA - Unravelling the molecular basis of common complex human disorders using the dog as a model system
Funders :
CE - Commission Européenne [BE]
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