Identification and characterization of EYD1, encoding an erythritol dehydrogenase in Yarrowia lipolytica and its application to bioconvert erythritol into erythrulose
Carly, F.; Unité de Biotechnologies et Bioprocédés, Université Libre de Bruxelles, Belgium
Steels, Sébastien ; Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
Telek, Samuel ; Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
Vandermies, Marie ; Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
Nicaud, J.-M.; Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France
Fickers, Patrick ; Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
Language :
English
Title :
Identification and characterization of EYD1, encoding an erythritol dehydrogenase in Yarrowia lipolytica and its application to bioconvert erythritol into erythrulose
Arasaki, H., Iwata, M., Makida, M., Masaki, Y., Synthesis of (R)-(+)-tanikolide through stereospecific C-H insertion reaction of dichlorocarbene with optically active secondary alcohol derivatives. Chem. Pharm. Bull. (Tokyo) 52 (2004), 848–852, 10.1248/cpb.52.848.
Barth, G., Gaillardin, C., Yarrowia lipolytica. Nonconventional Yeasts in Biotechnology, 1996, Springer, Berlin Heidelberg, Berlin, Heidelberg, 313–388.
Bertrand, G., Sur l'oxydation de l’érythrite par la bactérie du sorbose. Production de deux nouveaux sucres: le d-érythrulose et la d-érythrite. Bull. Société Chim. Paris Mém. 3 (1900), 681–686.
Carly, F., Gamboa-Melendez, H., Vandermies, M., Damblon, C., Nicaud, J.-M., Fickers, P., Identification and characterization of EYK1, a key gene for erythritol catabolism in Yarrowia lipolytica. Appl. Microbiol. Biotechnol. 101 (2017), 6587–6596, 10.1007/s00253-017-8361-y.
Carly, F., Vandermies, M., Telek, S., Steels, S., Thomas, S., Nicaud, J.-M., Fickers, P., Enhancing erythritol productivity in Yarrowia lipolytica using metabolic engineering. Metab. Eng. 42 (2017), 19–24, 10.1016/j.ymben.2017.05.002.
De Wilde, H., De Clercq, P., Vandewalle, M., Rőper, H., L-(S)-erythrulose a novel precursor to L-2,3-O-isopropylidene-C3 chirons. Tetrahedron Lett. 28 (1987), 4757–4758, 10.1016/S0040-4039(00)96618-8.
Ferreira, C., van Voorst, F., Martins, A., Neves, L., Oliveira, R., Kielland-Brandt, M.C., Lucas, C., Brandt, A., A member of the sugar transporter family, Stl1p is the glycerol/H+ symporter in Saccharomyces cerevisiae. Mol. Biol. Cell 16 (2005), 2068–2076, 10.1091/mbc.E04-10-0884.
Fickers, P., Benetti, P., Wache, Y., Marty, A., Mauersberger, S., Smit, M., Nicaud, J., Hydrophobic substrate utilisation by the yeast Yarrowia lipolytica, and its potential applications. FEMS Yeast Res. 5 (2005), 527–543, 10.1016/j.femsyr.2004.09.004.
Fickers, P., Le Dall, M., Gaillardin, C., Thonart, P., Nicaud, J., New disruption cassettes for rapid gene disruption and marker rescue in the yeast Yarrowia lipolytica. J. Microbiol. Methods 55 (2003), 727–737, 10.1016/j.mimet.2003.07.003.
Imfeld, D., Schmidhalter, D., Hischier, M.-L., Meyer, M.-A., Imboden, A., 2001. Process for the biotechnological preparation of L-erythrulose. WO2001042483 A1.
Jermann, R., Toumiat, M., Imfeld, D., Development of an in vitro efficacy test for self-tanning formulations. Int. J. Cosmet. Sci. 24 (2002), 35–42, 10.1046/j.0412-5463.2001.00123.x.
Jordan, P., Choe, J.-Y., Boles, E., Oreb, M., Hxt13, Hxt15, Hxt16 and Hxt17 from Saccharomyces cerevisiae represent a novel type of polyol transporters. Sci. Rep., 6, 2016, 23502, 10.1038/srep23502.
Klein, M., Swinnen, S., Thevelein, J.M., Nevoigt, E., Glycerol metabolism and transport in yeast and fungi: established knowledge and ambiguities: Glycerol catabolism in yeast. Environ. Microbiol. 19 (2017), 878–893, 10.1111/1462-2920.13617.
Klepek, Y.-S., Arabidopsis polyol transporter 5, a new member of the monosaccharide transporter-like superfamily, mediates H+-symport of numerous substrates, sncluding myo-inositol, glycerol, and ribose. Plant Cell Online 17 (2005), 204–218, 10.1105/tpc.104.026641.
Klepek, Y., Geiger, D., Stadler, R., Klebl, F., Landouar-Arsivaud, L., Lemoine, R., Hedrich, R., Sauer, N., Arabidopsis polyol transporters, a new member of the monosaccharide transporter-like superfamily mediates H+-symport of numerous substrates, including myo-inositol, glycerol, and ribose. Plant cell 17 (2005), 204–218, 10.1105/tpc.104.026641.
Lages, F., Lucas, C., Contribution to the physiological characterization of glycerol active uptake in Saccharomyces cerevisiae. Biochim. Biophys. Acta 1322 (1997), 8–18, 10.1016/S0005-2728(97)00062-5.
Lazar, Z., Rossignol, T., Verbeke, J., Crutz-Le Coq, A.-M., Nicaud, J.-M., Robak, M., Optimized invertase expression and secretion cassette for improving Yarrowia lipolytica growth on sucrose for industrial applications. J. Ind. Microbiol. Biotechnol. 40 (2013), 1273–1283, 10.1007/s10295-013-1323-1.
Lazar, Z., Neuvéglise, C., Rossignol, T., Devillers, H., Morin, N., Robak, M., Nicaud, J.M., Crutz-Le Coq, A.M., Characterization of hexose transporters in Yarrowia lipolytica reveals new groups of Sugar Porters involved in yeast growth. Fungal Genet. Biol. 100 (2017), 1–12, 10.1016/j.fgb.2017.01.001.
Lilly, M.D., Chauhan, R., French, C., Gyamerah, M., Hobbs, G.R., Humphrey, A., Isupov, M., Littlechild, J.A., Mitra, R.K., Morris, K.G., Rupprecht, M., Turner, N.J., Ward, J.M., Willetts, A.J., Woodley, J.M., Carbon-carbon bond synthesis: the impact of rDNA technology on the production and use of E. coli transketolase. Ann. N. Y. Acad. Sci. 782 (1996), 513–525, 10.1111/j.1749-6632.1996.tb40589.x.
Livak, K.J., Schmittgen, T.D., Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods 25 (2001), 402–408, 10.1006/meth.2001.1262.
Matosevic, S., Lye, G.J., Baganz, F., Immobilised enzyme microreactor for screening of multi-step bioconversions: Characterisation of a de novo transketolase-ω-transaminase pathway to synthesise chiral amino alcohols. J. Biotechnol. 155 (2011), 320–329, 10.1016/j.jbiotec.2011.07.017.
Metri, P.K., Schiess, R., Prasad, K.R., Enantiospecific total synthesis of (−)-bengamide E. Chem. – Asian J. 8 (2013), 488–493, 10.1002/asia.201200999.
Miranda, I., Lopes, Í., Diaz, M., Diaz, G., Synthesis approaches to (−)-Cytoxazone, a novel cytokine modulator, and related structures. Molecules, 21, 2016, 1176, 10.3390/molecules21091176.
Mizanur, R.M., Takeshita, K., Moshino, H., Takada, G., Izumori, K., Production of L-erythrose via L-erythrulose from erythritol using microbial and enzymatic reactions. J. Biosci. Bioeng. 92 (2001), 237–241, 10.1016/S1389-1723(01)80256-5.
Nishimura, K., Harada, T., Arita, Y., Watanabe, H., Iwabuki, H., Terada, A., Naganuma, T., Uzuka, Y., Identification of enzyme responsible for erythritol utilization and reaction product in yeast Lipomyces starkeyi. J. Biosci. Bioeng. 101 (2006), 303–308, 10.1263/jbb.101.303.
O'Sullivan, B., Al-Bahrani, H., Lawrence, J., Campos, M., Cázares, A., Baganz, F., Wohlgemuth, R., Hailes, H.C., Szita, N., Modular microfluidic reactor and inline filtration system for the biocatalytic synthesis of chiral metabolites. J. Mol. Catal. B Enzym. 77 (2012), 1–8, 10.1016/j.molcatb.2011.12.010.
Pan, L., Fang, Y., Zhou, P., Jin, K., Wang, G., Liu, Y., Strategy of oxygen transfer coefficient control on the L -erythrulose fermentation by newly isolated Gluconobacter kondonii. Electron. J. Biotechnol. 24 (2016), 26–31, 10.1016/j.ejbt.2016.08.006.
Paradowska, K., Nitka, D., Purification and characterization of erythritol dehydrogenase from Mycobacterium smegmatis. Ann. UMCS Pharm. 22 (2009), 47–55, 10.2478/v10080-008-0177-8.
Pereira, I., Madeira, A., Prista, C., Loureiro-Dias, M.C., Leandro, M.J., Characterization of new polyol/H+ symporters in Debaryomyces hansenii. PloS One, 9, 2014, e88180, 10.1371/journal.pone.0088180.
Querol, A., Barrio, E., Huerta, T., Ramón, D., Molecular monitoring of wine fermentations conducted by active dry yeast strains. Appl. Environ. Microbiol. 58 (1992), 2948–2953.
Sambrook, J., Fritsch, E., Maniatis, T., Molecular Cloning: A Laboratory Manual. second ed., 1989, Cold Spring Harbor, S.l.
Sassi, H., Delvigne, F., Kar, T., Nicaud, J.-M., Coq, A.-M.C.-L., Steels, S., Fickers, P., Deciphering how LIP2 and POX2 promoters can optimally regulate recombinant protein production in the yeast Yarrowia lipolytica. Microb. Cell Factories, 15, 2016, 10.1186/s12934-016-0558-8.
Van der Eycken, E., De Wilde, H., Deprez, L., Vandewalle, M., L-(S)-Erythrulose: the synthesis of (R)-1,2,4-butanetriol and of some related C4 chirons. Tetrahedron Lett. 28 (1987), 4759–4760, 10.1016/S0040-4039(00)96619-X.
Vandermies, M., Denies, O., Nicaud, J.-M., Fickers, P., EYK1 encoding erythrulose kinase as a catabolic selectable marker for genome editing in the non-conventional yeast Yarrowia lipolytica. J. Microbiol. Methods 139 (2017), 161–164, 10.1016/j.mimet.2017.05.012.
Wagle, D.R., Garai, C., Chiang, J., Monteleone, M.G., Kurys, B.E., Strohmeyer, T.W., Hegde, V.R., Manhas, M.S., Bose, A.K., Studies on lactams. 81. Enantiospecific synthesis and absolute configuration of substituted. Beta-lactams from D-glyceraldehyde acetonide. J. Org. Chem. 53 (1988), 4227–4236, 10.1021/jo00253a013.
Whistler, R.L., Underkofler, L.A., The production of L-erythrulose by the action of Acetobacter suboxydans upon erythritol. J. Am. Chem. Soc. 60 (1938), 2507–2508, 10.1021/ja01277a065.
Workman, M., Holt, P., Thykaer, J., Comparing cellular performance of Yarrowia lipolytica during growth on glucose and glycerol in submerged cultivations. AMB Express, 3, 2013, 58, 10.1186/2191-0855-3-58.
