High-throughput sequencing analysis reveals the genetic diversity of different regions of the murine norovirus genome during in vitro replication

Mauroy, Axel; Taminiau, Bernard; Nezer, Carine; Ghurburrun, Elsa; Baurain, Denis; Daube, Georges; Thiry, Etienne

doi:10.1007/s00705-016-3179-y

Article (Scientific journals)

High-throughput sequencing analysis reveals the genetic diversity of different regions of the murine norovirus genome during in vitro replication

Mauroy, Axel; Taminiau, Bernard; Nezer, Carine et al.

2017 • In Archives of Virology, 16 (4), p. 1019-1023

Peer Reviewed verified by ORBi

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https://hdl.handle.net/2268/204221

DOI
10.1007/s00705-016-3179-y

PubMed
27942973

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Abstract :

[en] In this study, we report the genetic diversity and nucleotide mutation rates of five representative regions of the murine norovirus genome during in vitro passages. The mutation rates were similar in genomic regions encompassing partial coding sequences for non-structural (NS) 1-2, NS5, NS6, NS7 proteins within open reading frame (ORF) 1. In a region encoding a portion of the major capsid protein (VP1) within ORF2 (also including the ORF4 region) and a portion of the minor structural protein (VP2), the mutation rates were estimated to be at least one order of magnitude higher. The VP2 coding region was found to have the highest mutation rate.

Research Center/Unit :

FARAH - Fundamental and Applied Research for Animals and Health - ULiège

Disciplines :

Microbiology

Author, co-author :

Mauroy, Axel ; Université de Liège > Département des maladies infectieuses et parasitaires (DMI) > Virologie vétérinaire et maladies virales animales

Taminiau, Bernard ; Université de Liège > Département de sciences des denrées alimentaires (DDA) > Microbiologie des denrées alimentaires

Nezer, Carine

Ghurburrun, Elsa

Baurain, Denis ; Université de Liège > Département des sciences de la vie > Phylogénomique des eucaryotes

Daube, Georges ; Université de Liège > Département de sciences des denrées alimentaires (DDA) > Microbiologie des denrées alimentaires

Thiry, Etienne ; Université de Liège > Département des maladies infectieuses et parasitaires (DMI) > Virologie vétérinaire et maladies virales animales

Language :

English

Title :

High-throughput sequencing analysis reveals the genetic diversity of different regions of the murine norovirus genome during in vitro replication

Publication date :

2017

Journal title :

Archives of Virology

ISSN :

0304-8608

eISSN :

1432-8798

Publisher :

Springer Science & Business Media B.V.

Volume :

Issue :

Pages :

1019-1023

Peer reviewed :

Peer Reviewed verified by ORBi

Available on ORBi :

since 12 December 2016

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