Real-time monitoring of cell viability and cell density on the basis of a three dimensional optical reflectance method (3D-ORM): investigation of the effect of sub-lethal and lethal injuries
[en] Cell density and cell viability have been followed on-line by using a three-dimensional optical reflectance method (3D-ORM) probe. This method has allowed to highlight the differences between a well-mixed and a scale-down bioreactor configured in order to reproduce mixing deficiencies during a fed-batch culture of E. coli. These differences have been observed both for the obscuration factor (OBF) and the coincidence probability (COP) delivered by the probe. These parameters are correlated to flow cytometry measurement based on the PI-uptake test and cell density based on optical density measurement. This first set of results has pointed out the fact that the 3D-ORM probe is sensitive to sub-lethal injuries encountered by microbial cells in process-related conditions. The effect of lethal injuries has been further investigated on the basis of additional experiments involving heat stress and a sharp increase of the OBF has been observed indicating that cells are effectively injured by the increase of temperature. However, further improvement of the probe are needed in order to give access to single-cell measurements.
Disciplines :
Biotechnology
Author, co-author :
Brognaux, Alison ; Université de Liège - ULiège > Département des sciences de la vie > Biochimie et microbiologie industrielles
Bugge, Jörg
Schwartz, Friedel
Thonart, Philippe ; Université de Liège - ULiège > Département des sciences de la vie > Biochimie et microbiologie industrielles
Telek, Samuel ; Université de Liège - ULiège > Chimie et bio-industries > Bio-industries
Delvigne, Frank ; Université de Liège - ULiège > Chimie et bio-industries > Bio-industries
Language :
English
Title :
Real-time monitoring of cell viability and cell density on the basis of a three dimensional optical reflectance method (3D-ORM): investigation of the effect of sub-lethal and lethal injuries
Publication date :
2013
Journal title :
Journal of Industrial Microbiology and Biotechnology
ISSN :
1367-5435
eISSN :
1476-5535
Publisher :
Springer, Berlin, Germany
Peer reviewed :
Peer Reviewed verified by ORBi
Funders :
FRIA - Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture [BE]
Abu-Absi NR, Zamamiri A, Kacmar J, Balogh SJ, Srienc F (2003) Automated flow cytometry for acquisition of time-dependent population data. Cytom Part A 51A:87-96
Aertsen A, Michiels CW (2004) Stress and how bacteria cope with death and survival. Crit Rev Microbiol 30:263-273
Arnoux AS, Preziosi-Belloy L, Esteban G, Teissier P, Ghommidh C (2005) Lactic acid bacteria biomass monitoring in highly conductive media by permittivity measurements. Biotechnol Lett 27(20):1551-1557
Bäcklund E, Reeks D, Marklanda K, Weir N, Bowering L, Larsson G (2008) Fedbatch design for periplasmic product retention in Escherichia coli. J Biotechnol 135:358-365
Broger T, Odermatt RP, Huber P, Sonnleitner B (2011) Real-time on-line flow cytometry for bioprocess monitoring. J Biotechnol 154(4):240-247
Brognaux A Neubauer P, Twizere JC, Francis F, Gorret N, Thonart P, Delvigne F (2012) Direct and indirect use of GFP whole cell biosensors for the assessment of bioprocess performances: design of milliliter scale-down bioreactors. Biotechnol prog (in press)
Carlquist M, Fernandes RL, Helmark S, Heins AL, Lundin L, Sørensen SJ, Gernaey KV, Lantz AE (2012) Physiological heterogeneities in microbial populations and implications for physical stress tolerance. Microb Cell Fact 11:94
Davey HM (2011) Life, death, and in-between: meanings and methods in microbiology. Appl Environ Microbiol 77(16):5571-5576
Delvigne F, Brognaux A, Francis F, Twizere JC, Gorret N, Sorensen SJ, Thonart P (2011) Green fluorescent protein (GFP) leakage from microbial biosensors provides useful information for the estimation of the scale-down effect. Biotechnol J 6:968-978
Delvigne F, Brognaux A, Gorret N, Neubauer P, Delafosse A, Collignon ML, Toye D, Crine M, Thonart P (2011) Characterization of the response of GFP microbial biosensors sensitive to substrate limitation in scale-down bioreactors. Biochem Eng J 55:131-139
Delvigne F, Destain J, Thonart P (2005) Bioreactor hydrodynamic effect on Escherichia coli physiology: experimental results and stochastic simulations. Bioprocess Biosyst Eng 28:131-137
Diaz M, Herrero M, Garcia LA, Quiros C (2010) Application of flow cytometry to industrial microbial bioprocesses. Biochem Eng J 48:385-407
Enfors SO, Jahic M, Rozkov A, Xu B, Hecker M, Jürgen B, Krüger E, Schweder T, Hamer G, O'Beirne D, Noisommit-Rizzi N, Reuss M, Boone L, Hewitt C, McFarlane C, Nienow A, Kovacs T, Trägardh C, Fuchs L, Revstedt J, Friberg PC, Hjertager B, Blomsten G, Skogman H, Hjort S, Hoeks F, Lin HY, Neubauer P, van der Lans R, Luyben K, Vrabel P, Manelius A (2001) Physiological responses to mixing in large scale bioreactors. J Biotechnol 85:175-185
Ferenci T (1996) Adaptation to life at micromolar nutrient levels: the regulation of Escherichia coli glucose transport by endoinduction and cAMP. FEMS Microbiol Rev 18:301-317
Ferenci T (2001) Hungry bacteria - definition and properties of a nutritional state. Environ Microbiol 3(10):605-611
Fritzsch FSO, Dusny C, Frick O, Schmid A (2012) Single-cell analysis in biotechnology, systems biology, and biocatalysis. Ann Rev Chem Biomol Eng 3:129-155
Hammes F, Berney M, Egli T (2011) Cultivation-independent assessment of bacterial viability. Adv Biochem Eng Biotechnol 124:123-150
Hammes F, Broger T, Weilenmann HU, Vital M, Helbing J, Bosshart U, Huber P, Odermatt RP, Sonnleitner B (2012) Development and laboratory-scale testing of a fully automated online flow cytometer for drinking water analysis. Cytom Part A 81(6):508-516
Hewitt CJ, Nienow AW (2007) The scale-up of microbial batch and fed-batch fermentation processes. Advances in Applied Microbiology 62:105-135
Höpfner T, Bluma A, Rudolph G, Lindner P, Scheper T (2010) A review of non-invasive optical-based image analysis systems for continuous bioprocess monitoring. Bioprocess Biosyst Eng 33:247-256
http://www.sequip-particle-technology.de/ (2012)
Justice C, Leber J, Freimark D, Pino Grace P, Kraume M, Czermak P (2011) Online- and offline- monitoring of stem cell expansion on microcarrier. Cytotechnology 63(4):325-335
Lara AR, Galindo E, Ramirez OT, Palomares LA (2006) Living with heterogeneities in bioreactors: understanding the effects of environmental gradients on cells. Mol Biotechnol 34:355-381
Lourenço ND, Lopes JA, Almeida CF, Sarraguça MC, Pinheiro HM (2012) Bioreactor monitoring with spectroscopy and chemometrics: a review. Anal Bioanal Chem 404(4):1211-1237
Neubauer P, Junne S (2010) Scale-down simulators for metabolic analysis of large-scale bioprocesses. Curr Opin Biotechnol 21:114-121
Rudolph G, Lindner P, Bluma A, Joeris K, Martinez G, Hitzmann B, Scheper T (2010) Optical inline measurement procedures for counting and sizing cells in bioprocess technology. Adv Biochem Eng Biotechnol 116:125-142
Shokri A, Sanden AM, Larsson G (2002) Growth rate dependent changes in Escherichia coli membrane structure and protein leakage. Appl Microbiol Biotechnol 58:386-392
Sonnleitner B (2012) Automated Measurement and Monitoring of Bioprocesses: Key Elements of the M(3)C Strategy. Advances in biochemical engineering and biotechnology (in press)
Storz G, Hengge-Aronis E (2000) Bacterial stress response. ASM press, Washington, DC, p 485
Strauber H, Muller S (2009) Viability states of bacteria - specific mechanisms of selected probes. Cytom Part A 77A:623-634
Wei N, You J, Friehs K, Flaschel E, Nattkemper TW (2011) An in situ probe for on-line monitoring of cell density and viability on the basis of dark field microscopy in conjunction with image processing and supervised machine learning. Biotechnol Bioeng 97(6):1489-1500
Xiong ZQ, Guo MJ, Guo YX, Chu J, Zhuang YP, Zhang SL (2008) Real-time viable-cell mass monitoring in high-cell-density fed-batch glutathione fermentation by Saccharomyces cerevisiae T65 in industrial complex medium. J Biosci Bioeng 105(4):409-413