Profil

Joiret Marc

GIGA In silico medecine - Biomechanics Research Unit

HEC Liège : UER > UER Opérations

Département d'aérospatiale et mécanique > GIGA

Génie biomécanique

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ORCID
0000-0001-5381-4196
Main Referenced Co-authors
Geris, Liesbet  (12)
Close, Pierre  (9)
Rapino, Francesca  (8)
Blacher, Silvia  (2)
Kerff, Frédéric  (2)
Main Referenced Keywords
TASEP (4); Biophysics (3); ribosome (3); codon usage (2); data efficiency (2);
Main Referenced Unit & Research Centers
GIGA In silico medecine-Biomechanics Research Unit - ULiège [BE] (2)
GIGA‐R - Giga‐Research - ULiège [BE] (2)
BIOMECH (1)
Biomech Research Unit (1)
Biomech research Unit - GIGA Institute GIGA In silico medicine (1)
Main Referenced Disciplines
Biochemistry, biophysics & molecular biology (10)
Physical, chemical, mathematical & earth Sciences: Multidisciplinary, general & others (4)
Oncology (3)
Computer science (2)
Engineering, computing & technology: Multidisciplinary, general & others (1)

Publications (total 14)

The most downloaded
372 downloads
Joiret, M., Kerff, F., Rapino, F., Close, P., & Geris, L. (13 January 2022). Ribosome exit tunnel electrostatics. Physical Review. E, 105 (1), 014409-1 - 014409-43. doi:10.1103/PhysRevE.105.014409 https://hdl.handle.net/2268/267021

The most cited

25 citations (Scopus®)

Joiret, M., Mahachie John, J., Gusareva, E., & Van Steen, K. (10 June 2019). Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies. BioData Mining, 12 (11), 1-23. doi:10.1186/s13040-019-0199-7 https://hdl.handle.net/2268/236791

Joiret, M., Kerff, F., Rapino, F., Close, P., & Geris, L. (July 2023). A simple geometrical model of the electrostatic environment around the catalytic center of the ribosome and its significance for the elongation cycle kinetics. Computational and Structural Biotechnology Journal, 21, 3768-3795. doi:10.1016/j.csbj.2023.07.016
Peer Reviewed verified by ORBi

Joiret, M., Leclercq, M., Lambrechts, G., Rapino, F., Close, P., Louppe, G., & Geris, L. (06 April 2023). Cracking the genetic code with neural networks. Frontiers in Artificial Intelligence, 6. doi:10.3389/frai.2023.1128153
Peer Reviewed verified by ORBi

Joiret, M., Leclercq, M., Lambrechts, G., Rapino, F., Close, P., Louppe, G., & Geris, L. (2023). Cracking the genetic code with neural networks (poster) [Paper presentation]. Neural networks: real versus man-made, Liège, Belgium.

Joiret, M., Rapino, F., Close, P., & Geris, L. (06 September 2022). A simple model of the electrostatic environment around the catalytic center of the ribosome and its significance for the elongation kinetics [Poster presentation]. Translational Control meeting, Cold Spring Harbor, New-York, United States - New York.
Editorial reviewed

Joiret, M., Kerff, F., Rapino, F., Close, P., & Geris, L. (13 January 2022). Ribosome exit tunnel electrostatics. Physical Review. E, 105 (1), 014409-1 - 014409-43. doi:10.1103/PhysRevE.105.014409
Peer Reviewed verified by ORBi

Joiret, M., Mahachie John, J., Gusareva, E., & Van Steen, K. (2022). Correction: Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies. BioData Mining, 15 (1), 1-1. doi:10.1186/s13040-022-00296-9
Peer Reviewed verified by ORBi

Joiret, M., Rapino, F., Close, P., & Geris, L. (09 September 2021). Ribosome exit tunnel electrostatics [Poster presentation]. EMBO - Workshop - Protein synthesis and translational control, Heidelberg, Germany.

Van de Velde, M., Ebroin, M., Durré, T., Joiret, M., Gillot, L., Blacher, S., Geris, L., Kridelka, F., & Noël, A. (2021). Tumor exposed-lymphatic endothelial cells promote primary tumor growth via IL6. Cancer Letters, 497, 154-164. doi:10.1016/j.canlet.2020.10.020
Peer Reviewed verified by ORBi

Rapino, F.* , ZHOU, Z.* , RONCERO SANCHEZ, A. M.* , Joiret, M., Seca, C., El Hachem, N., Valenti, G., Latini, S., Shostak, K., Geris, L., Li, P., Huang, G., Mazzucchelli, G., Baiwir, D., Desmet, C., Chariot, A., Georges, M., & Close, P. (2021). Wobble tRNA modification and hydrophilic amino acid patterns dictate protein fate. Nature Communications, 12 (1), 2170. doi:10.1038/s41467-021-22254-5
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

Gallez, A., Blacher, S., Maquoi, E., Konradowski, E., Joiret, M., Primac, I., Gérard, C., Taziaux, M., Houtman, R., Geris, L., Lenfant, F., Marangoni, E., Sounni, N. E., Foidart, J.-M., Noël, A., & Pequeux, C. (2021). Estetrol combined to progestogen for menopause or contraception indication is neutral on breast cancer. Cancers. doi:10.3390/cancers13102486
Peer Reviewed verified by ORBi

Joiret, M., Geris, L., & Close, P. (2020). Protein synthesis at the speed of codons [Paper presentation]. In Silico medicine seminar, LIEGE, Belgium.

Zappia, J., Joiret, M., Sanchez, C., Lambert, C., Geris, L., Muller, M., & Henrotin, Y. (2020). From translation to protein degradation as mechanisms for regulating biological functions: A review on the SLRP family in skeletal tissues. Biomolecules, 10, 80. doi:10.3390/biom10010080
Peer Reviewed verified by ORBi

Joiret, M., Rapino, F., Close, P., & Geris, L. (05 September 2019). mRNA translation rate modeling with an extended TASEP incorporating tRNAs modifications [Poster presentation]. EMBO Workshop - Protein Synthesis and Translational Control, Heidelberg, Germany.

Joiret, M., Mahachie John, J., Gusareva, E., & Van Steen, K. (10 June 2019). Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies. BioData Mining, 12 (11), 1-23. doi:10.1186/s13040-019-0199-7
Peer Reviewed verified by ORBi

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