[en] Anopheles sundaicus s.l. is a malaria vector in coastal areas of Southeast Asia. Previous studies showed at least four distinct species within the complex. The present study investigated the phylogeography and the status of A. sundaicus s.l. populations from Cambodia, Thailand, Malaysia and Indonesia with regard to A. sundaicus s.s. from Sarawak, Malaysian Borneo and A. epiroticus in Vietnam and Thailand. Three lineages recovered by analyses of Cyt-b and COI (mtDNA) confirmed the presence of A. sundaicus s.s. in Malaysian Borneo, the distribution of A. epiroticus from southern Vietnam to peninsular Malaysia, and recognised a distinct form in Indonesia that is named A. sundaicus E. The phylogenetic and demographic analyses suggest that the three species were separated during the Early Pleistocene (1.8-0.78 Myr) and experienced bottlenecks followed by a genetic expansion in more recent times. Based on the results and knowledge of the biogeography of the area, we hypothesise that the combination of cyclical island and refugium creation was the cause of lineage isolation and bottleneck events during the Pleistocene.
Disciplines :
Zoology
Author, co-author :
Dusfour, Isabelle
Michaux, Johan ; Université de Liège - ULiège > Département des sciences de la vie > Génétique
Harbach, Ralph E
Manguin, Sylvie
Language :
English
Title :
Speciation and phylogeography of the Southeast Asian Anopheles sundaicus complex.
Publication date :
2007
Journal title :
Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases
Alam M.T., Das M.K., Ansari M.A., and Sharma Y.D. Molecular identification of Anopheles (Cellia) sundaicus from the Andaman and Nicobar islands of India. Acta Trop. 97 (2006) 10-18
Andreev D., Breilid H., Kirkendall L., Brun L.O., and ffrench-Constant R.H. Lack of nucleotide variability in a beetle pest with extreme inbreeding. Insect Mol. Biol. 7 (1998) 197-200
Avise J.C. Phylogeography. The History and Formation of Species (2000), Harvard University Press, Cambridge, MA 464 pp.
Bandelt H.J., Forster P., and Rohl A. Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 16 (1999) 37-48
Beard C.B., Hamm D.M., and Collins F.H. The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization, and comparisons with mitochondrial sequences of other insects. Insect Mol. Biol. 2 (1993) 103-124
Beebe N.W., and Saul A. Discrimination of all members of the Anopheles punctulatus complex by polymerase chain reaction-restriction fragment length polymorphism analysis. Am. J. Trop. Med. Hyg. 53 (1995) 478-481
Beebe N.W., Maung J., van den Hurk A.F., Ellis J.T., and Cooper R.D. Ribosomal DNA spacer genotypes of the Anopheles bancroftii group (Diptera: Culicidae) from Australia and Papua New Guinea. Insect Mol. Biol. 10 (2001) 407-413
Besansky N.J. Complexities in the analysis of cryptic taxa within the genus Anopheles. Parassitologia 41 (1999) 97-100
Besansky N.J., Krzywinski J., Lehmann T., Simard F., Kern M., Mukabayire O., Fontenille D., Toure Y., and Sagnon N. Semipermeable species boundaries between Anopheles gambiae and Anopheles arabiensis: evidence from multilocus DNA sequence variation. Proc. Natl. Acad. Sci. U.S.A. 100 (2003) 10818-10823
Brandon-Jones D. The Asian Colobinae (Mammalia: Cercopithecidae) as indicators of quaternary climatic change. Biol. J. Linn. Soc. Lond. 59 (1996) 327-350
Brower A.V. Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proc. Natl. Acad. Sci. U.S.A. 91 (1994) 6491-6495
Clement M., Posada D., and Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9 (2000) 1657-1659
Cognato A.I., Harlin A.D., and Fisher M.L. Genetic structure among pinion pine beetle populations (Scolytinae: Ips confusus). Environ. Entomol. 32 (2003) 1262-1270
Collins F.H., and Paskewitz S.M. A review of the use of ribosomal DNA (rDNA) to differentiate among cryptic Anopheles species. Insect. Mol. Biol. 5 (1996) 1-9
Coluzzi M. Spatial distribution of chromosomal inversions and speciation in anopheline mosquitoes. Prog. Clin. Biol. Res. 96 (1982) 143-153
Cracraft J. Species concepts and speciation analysis. Curr. Ornith. 1 (1983) 159-187
De Salle R., Friedman T., Prager E.M., and Wilson A.C. Tempo and mode of sequence evolution in mitochondrial of Hawaiian Drosophila. J. Mol. Evol. 26 (1987) 157-164
della Torre A., Merzagora L., Powell J.R., and Coluzzi M. Selective introgression of paracentric inversions between two sibling species of the Anopheles gambiae complex. Genetics 146 (1997) 239-244
Dusfour I., Harbach R.E., and Manguin S. Bionomics and systematics of the oriental Anopheles sundaicus complex in relation to malaria and vector control. Am. J. Trop. Med. Hyg. 71 (2004) 518-524
Dusfour I., Linton Y.M., Cohuet A., Harbach R.E., Baimai V., Trung H.D., Chang M.S., Matusop A., and Manguin S. Molecular evidence of speciation between island and continental populations of Anopheles (Cellia) sundaicus Rodenwaldt (Diptera: Culicidae), a principal malaria vector in Southeast Asia. J. Med. Entomol. 41 (2004) 287-295
Dusfour, I., Blondeau, J., Harbach, R.E., Vythilingham, I., Baimai, V., Trung, H.D., Sochanta, T., Bangs, M., Manguin, S., 2007. PCR identification of the three members of the Anopheles sundaicus (Diptera: Culicidae) complex, malaria vectors in Southeast Asia. J. Med. Entomol. 44, in press.
Farris J.S., Källersjö M., Kluge A.G., and Bult C. Testing significance of congruence. Cladistics 10 (1994) 315-319
Felsenstein J. PHYLIP Computer Program, Version by Felsenstein J (1994), University of Washington, Seattle, Washington
Fleischer R.C., McIntosh C.E., and Tarr C.L. Evolution on a volcanic conveyor belt: using phylogeographic reconstructions and K-Ar-based ages of the Hawaiian Islands to estimate molecular evolutionary rates. Mol. Ecol. 7 (1998) 533-545
Foley D.H., Bryan J.H., Yeates D., and Saul A. Evolution and systematics of Anopheles: insights from a molecular phylogeny of Australasian mosquitoes. Mol. Phyl. Evol. 9 (1998) 262-275
Fu Y.X. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147 (1997) 915-925
Fu Y.X., and Li W.H. Statistical tests of neutrality of mutations. Genetics 133 (1993) 693-709
Gandolfi A., Bonilaui P., Rossi V., and Menossi P. Intraindividual and intraspecies variability of ITS1 sequences in the ancient asexual Darwinula stevensoni (Crustacea: Ostracoda). Heredity 87 (2001) 449-455
Garcia-Paris M., Alcobendas M., Buckley D., and Wake D.B. Dispersal of viviparity across contact zones in Iberian populations of fire salamanders (Salamandra) inferred from discordance of genetic and morphological traits. Evolution 57 (2003) 129-143
Gathorne-Hardy F.J., Syaukani R.G., Davies R.G., Eggleton P., and Jones D.T. Quaternary refugia in south-east Asia: using termites (Isoptera) as indicators. Biol. J. Linn. Soc. Lond. 75 (2002) 453-466
Gentile G., Della Torre A., Maegga B., Powell J.R., and Caccone A. Genetic differentiation in the African malaria vector, Anopheles gambiae s.s., and the problem of taxonomic status. Genetics 161 (2002) 1561-1578
Gorog A.J., Sinaga M.H., and Engstrom M.D. Vicariance or dispersal? Historical biogeography of three Sunda shelf murine rodents (Maxomys surifer, Leopoldamys sabanus and Maxomys whitheadi). Biol. J. Linn. Soc. Lond. 91 (2004) 91-109
Guindon S., and Gascuel O. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41 (1999) 95-98
Harbach R.E., Parson E., Chen B., and Butlin R.K. Anopheles (Cellia) minimus Theobald (Diptera: Culicidae): Neotype designation, characterization, and systematics. Proc. Entomol. Soc. Wash. 108 (2006) 198-209
IMPE. Keys to Anopheles in Vietnam (Adults-Pupae-Larvae) (1987), Department of Entomology, Institute of Malariology, Parasitology and Entomology, Hanoi, Vietnam
Knowlton N., Weigt L.A., Solorzano L.A., Mills D.K., and Bermingham E. Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the Isthmus of Panama. Science 260 (1993) 1629-1632
Kumar S., Tamura K., Jacobsen I.B., and Masatoshi N. MEGA molecular evolutionary genetics analysis version 2.1. Bioinformatics 17 (2001) 1244-1245
Linton Y.M., Harbach R.E., Seng C.M., Anthony T.G., and Matusop A. Morphological and molecular identity of Anopheles (Cellia) sundaicus (Diptera: Culicidae), the nominotypical member of a malaria vector species complex in Southeast Asia. Syst. Entomol. 26 (2001) 357-366
Linton Y.M., Dusfour I., Howard T.M., Ruiz L.F., Duc Manh N., Ho Dinh T., Sochanta T., Coosemans M., and Harbach R.E. Anopheles (Cellia) epiroticus, a new malaria vector species in the Southeast Asian Sundaicus Complex. Bull. Entomol. Res. 95 (2005) 329-339
Nanda N., Das M.K., Wattal S., Adak T., and Subbarao S.K. Cytogenetic characterization of Anopheles sundaicus (Diptera: Culicidae) population from Car Nicobar Island. India. Ann. Entomol. Soc. Am. 97 (2004) 171-176
Nguyen T.A., Le Quy R., Vu Thi H., and Nguyen Bieh L. Entomo-epidemiological studies of malaria in the coastal zone of Ho Chi Minh City, 1990-1992. Santé 3 (1993) 464-473
Onyabe D.Y., and Conn J.E. Intragenomic heterogeneity of a ribosomal DNA spacer (ITS2) varies regionally in the neotropical malaria vector Anopheles nuneztovari (Diptera: Culicidae). Insect Mol. Biol. 8 (1999) 435-442
Posada D., and Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
Reid J.A. Anopheline Mosquitoes of Malaya and Borneo (1968), Studies of the Institute of Medical Research Malaya. Government of Malaysia, Kuala Lumpur, Malaysia 520 pp.
Reid J.A. Systematics of malaria vectors-anopheline systematics and malaria control, with special reference to Southeast Asia. Misc. Publ. Entomol. Soc. Am. 7 (1970) 52-62
Reyes A., and Ochando M.D. Genetic differentiation in Spanish populations of Ceratitis capitata as revealed by abundant soluble protein analysis. Genetica 104 (1998) 59-66
Robinson-Rechavi M., and Huchon D. RRTree: relative-rate tests between groups of sequences on a phylogenetic tree. Bioinformatics 16 (2000) 296-297
Rogers A.R., and Harpending H. Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 9 (1992) 552-569
Rozas J., Sanchez-Delbarrio J.C., Messeguer X., and Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19 (2003) 2496-2497
Schneider S., Roessli D., and Excoffier L. ARLEQUIN Version 2.000 A Software for Population Genetics Data Analysis Computer Program, Version by Schneider, S., Roessli, D., Excoffier, L. (2000), Genetics and Biometry Lab, Dept. of Anthropology, University of Geneva, Geneva
Seng C.M., Linton Y.M., and Harbach R.E. The Anopheles sundaicus species complex-a preliminary study of larval ecology from two sites in Sarawak, Malaysia. Mekong Malaria Forum 8 (2001) 91-95
Simmons R.B., and Weller S.J. Utility and evolution of cytochrome b in insects. Mol. Phylogenet. Evol. 20 (2001) 196-210
Slatkin M. Inbreeding coefficients and coalescence times. Genet. Res. 58 (1991) 167-175
Sukowati S., Baimai V., and Andris H. Sex chromosome variation in natural populations of the Anopheles sundaicus complex from Thailand and Indonesia. Mosq. Borne Dis. Bull. 13 (1996) 8-13
Sukowati S., Baimai V., Harun S., Dasuki Y., Andris H., and Efriwati M. Isozyme evidence for three sibling species in the Anopheles sundaicus complex from Indonesia. Med. Vet. Entomol. 13 (1999) 408-414
Swofford D.L. PAUP: Phylogenetic Analysis Using Parsimony (and Others Methods) Version 4.0b10 (2002), D. L., Sinauer Associates, Sunderland, MA
Tamura K., Subramanian S., and Kumar S. Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. Mol. Biol. Evol. 21 (2004) 36-44
Tang J., Toe L., Back C., and Unnasch T.R. Intra-specific heterogeneity of the rDNA internal transcribed spacer in the Simulium damnosum (Diptera: Simuliidae) complex. Mol. Biol. Evol. 13 (1996) 244-252
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
Toure Y.T., Petrarca V., Traore S.F., Coulibaly A., Maiga H.M., Sankare O., Sow M., Di Deco M.A., and Coluzzi M. The distribution and inversion polymorphism of chromosomally recognized taxa of the Anopheles gambiae complex in Mali, West Africa. Parasitologia 40 (1998) 477-511
Whang I.J., Jung J., Park J.K., Min G.S., and Kim W. Intragenomic length variation of the ribosomal DNA intergenic spacer in a malaria vector, Anopheles sinensis. Mol. Cells 14 (2002) 158-162
White M.J.D. Animal Cytology and Evolution (1973), Cambridge University Press, Cambridge 375 pp.