Profil

Michaux Johan

Département des sciences de la vie > Laboratoire de génétique de la conservation

Département de Biologie, Ecologie et Evolution

InBioS

See author's contact details
ORCID
0000-0003-4644-9244
Main Referenced Co-authors
Latinne, Alice  (25)
Mouton, Alice  (24)
Libois, Roland  (21)
Morand, Serge (20)
Pagès, Marie  (17)
Main Referenced Keywords
Animals (24); Phylogeny (18); Genetic Variation (15); Sequence Analysis, DNA (14); Molecular Sequence Data (12);
Main Referenced Unit & Research Centers
AFFISH-RC - Applied and Fundamental FISH Research Center - ULiège (6)
FOCUS - Freshwater and OCeanic science Unit of reSearch - ULiège [BE] (1)
Forest is Life, TERRA, Gembloux Agro-Bio Tech, University of Liège (1)
Génétique de la conservation (1)
MARE - Centre Interfacultaire de Recherches en Océanologie - ULiège [BE] (1)
Main Referenced Disciplines
Zoology (203)
Genetics & genetic processes (37)
Environmental sciences & ecology (16)
Life sciences: Multidisciplinary, general & others (7)
Aquatic sciences & oceanology (6)

Publications (total 245)

The most downloaded
2731 downloads
Christe, P., Morand, S., & Michaux, J. (2006). Implications for conservation biology. In S. Morand (Ed.), Micro-mammals and macroparasites: from evolutionary ecology to management (pp. 590-616). Tokyo, Japan: Springer-Verlag. https://hdl.handle.net/2268/174128

The most cited

224 citations (Scopus®)

Deffontaine Deurbroeck, V., Libois, R., Kotlík, P., Sommer, R., Nieberding, C., Paradis, E., Searle, J., & Michaux, J. (2005). Beyond the Mediterranean peninsulas: evidence of central European glacial refugia for a temperate forest mammal species, the bank vole (Clethrionomys glareolus). Molecular Ecology, 14 (6), 1727-1739. doi:10.1111/j.1365-294X.2005.02506.x https://hdl.handle.net/2268/66149

Vescera, C., Van Vyve, C., Smits, Q., & Michaux, J. (2023). Le Murin à oreilles échancrées, une espèce de chauve-souris spécialisée dans la chasse des araignées se transforme en un mangeur de mouches nuisibles - Buffet à volonté dans les étables [Paper presentation]. Colloque Naturaliste, Namur, Belgium.

Van Leeuwen, P., & Michaux, J. (December 2023). Using eDNA for mammal inventories still needs naturalist expertise, a meta-analysis. Ecology and Evolution, 13 (12), 10788. doi:10.1002/ece3.10788
Peer Reviewed verified by ORBi

Talenti, A., Wilkinson, T., Cook, E. A., Hemmink, J. D., Paxton, E., Mutinda, M., Ngulu, S. D., Jayaraman, S., Bishop, R. P., Obara, I., Hourlier, T., Giron, C. G., Martin, F. J., Labuschagne, M., Atimnedi, P., Nanteza, A., Keyyu, J. D., Mramba, F., Caron, A., ... Morrison, L. J. (2023). Continent-wide genomic analysis of the African buffalo (<i>Syncerus caffer</i>). ORBi-University of Liège. https://orbi.uliege.be/handle/2268/312040. doi:10.1101/2023.11.12.566748

Vescera, C., Van Vyve, C., Smits, Q., & Michaux, J. (September 2023). BUFFET A VOLONTE DANS LES ETABLES: Myotis emarginatus, spécialisé dans la chasse des araignées, se transforme en un mangeur de mouches nuisibles [Poster presentation]. 10èmes Rencontres Chiroptères Très Grand Est, Châtenois (67), France.

Beez, T., Leyhausen, J., Mueller, S., von Thaden, A., Bertolino, S., Büchner, S., Fietz, J., Lang, J., Michaux, J., Verbeylen, G., Nowak, C., & Cocchiararo, B. (2023). Development of a microfluidic SNP assay for lineage discrimination in the endangered hazel dormouse. ORBi-University of Liège. https://orbi.uliege.be/handle/2268/312031. doi:10.21203/rs.3.rs-3024782/v1

Vescera, C., Van Vyve, C., Smits, Q., & Michaux, J. (31 May 2023). Agriculture shapes the dietary spectrum of Myotis emarginatus, a bat species originally foraging under dense vegetation cover [Paper presentation]. ZOOLOGY 2023: Evolution, development and plasticity in a changing world, Leiden, Netherlands.

Esson, C., Samelius, G., Strand, T. M., Lundkvist, Å., Michaux, J., Råsbäck, T., Wahab, T., Mijiddorj, T. N., Berger, L., Skerratt, L. F., & Low, M. (2023). The prevalence of rodent-borne zoonotic pathogens in the South Gobi desert region of Mongolia. Infection Ecology and Epidemiology, 13 (1), 2270258. doi:10.1080/20008686.2023.2270258
Peer Reviewed verified by ORBi

Michaux, J. (2023). Taxonomic Status of the African Buffalo. In Ecology and Management of the African Buffalo. Cambridge, United Kingdom: Cambridge University Press.
Peer reviewed

Gailly, D., Mouton alice, Denys Hélène, Bourgarel Mathieu, Capelle Julien, Caron Alexandre, Pouliquen Thibault, Leendertz Fabian, Lalis AUde, Nicolas Violaine, Hulva Pavel, & Michaux, J. (2023). Population genetics of African Fruit Bats involved in ecology of Filoviridae (Ebola virus, Marburg virus) in West, Central and Southern Africa. Virologie, 27.
Peer Reviewed verified by ORBi

Van Leeuwen, P., Schulte-Hostedde, A. I., Fournier-Chambrillon, C., Fournier, P., Pigneur, L.-M., Aranda, C. M., Urra-Maya, F., & Michaux, J. (2023). A Microbial Tale of Farming, Invasion and Conservation: On the Gut Bacteria of European and American Mink in Western Europe. Biological Invasions. doi:10.21203/rs.3.rs-912230/v1
Peer reviewed

Visser, F., Drouilly, M., Moodley, M., Michaux, J., & Somers, M. (2023). Mismatch between conservation needs and actual representation of lions from West and Central Africa in in situ and ex situ conservation. Conservation Letters, 16;e12949. doi:10.1111/conl.12949
Peer Reviewed verified by ORBi

Houngbegnon, F., Gillet, J.-F., Michaux, J., Brostaux, Y., Zebaze Dongmo, D., Lhoest, S., Vermeulen, C., Sonké, B., & Doucet, J.-L. (24 November 2022). Seed dispersal by duikers in selectively logged rainforests: Overlooked dispersal of an important animal community. Forest Ecology and Management, 529, 120650. doi:10.1016/j.foreco.2022.120650
Peer Reviewed verified by ORBi

Vescera, C., Van Vyve, C., Smits, Q., & Michaux, J. (07 November 2022). Temporal and spatial variation of Myotis emarginatus diet to gain insights into potential foraging sites and hunting techniques [Paper presentation]. JOURNÉE DE CONFÉRENCES « ÉTUDE ET CONSERVATION DE LA FAUNE EN MILIEUX TROPICAUX ET TEMPÉRÉS », Gembloux, Belgium.

Vescera, C., Van Vyve, C., Smits, Q., & Michaux, J. (2022). Het dieet van de ingekorven vleermuis ontsluierd [Paper presentation]. Bat symposium, Woluwe-Saint-Lambert, Belgium.

Jean Métis, N. M., ZebeVictorine, M., Michaux, J., & Jean-Claude, M. (October 2022). Sustainable exploitation and participative conservation of Mormyridae fishes in the Malebo Pool, Congo River, Kinshasa. African Journal of Biological Sciences, 4 (4), 77 - 91. doi:10.33472/AFJBS.4.4.2022.77-91
Peer reviewed

Etherington, G. J., Ciezarek, A., Shaw, R., Michaux, J., Croose, E., Haerty, W., & Di Palma, F. (2022). Extensive genome introgression between domestic ferret and European polecat during population recovery in Great Britain. Journal of Heredity. doi:10.1093/jhered/esac038
Peer reviewed

Ntumba Mabedi, J. M., Mbadu Zebe, V., Michaux, J., & Micha, J.-C. (08 July 2022). Biologie de la reproduction des Marcusenius (M. monteiri, M. stanleyanus, M. schilthuisiae et M. macrolepidotus) du Pool Malebo, fleuve Congo, Kinshasa. International Journal of Biological and Chemical Sciences, 16 (2), 564 - 580. doi:10.4314/ijbcs.v16i2.5
Peer Reviewed verified by ORBi

Leyhausen, J., Cocchiararo, B., Nowak, C., Ansorge, H., Bertolino, S., Büchner, S., Fietz, J., Foppen, R., Juškaitis, R., La Haye, M., Lang, J., Michaux, J., Verbeylen, G., von Thaden, A., & Mueller, S. A. (June 2022). Genotyping-by-sequencing based SNP discovery in a non-model rodent, the endangered hazel dormouse. Conservation Genetics Resources, 14 (2), 195 - 201. doi:10.1007/s12686-022-01253-8
Peer Reviewed verified by ORBi

Mouton, A., El Mojahid, A., Nedialkov, N., & Michaux, J. (15 April 2022). Population genomics of the Forest Dormouse (Dryomys nitedula) in Bulgaria [Paper presentation]. International Dormouse Conference, Bulgaria. doi:10.3897/aca.5.e82475
Peer reviewed

El Mojahid, A., Nedyalkov, N., Astaras, C., Juškaitis, R., Bivoleanu, R.-A., Ladurner, E., Aloise, G., Stakheev, V., Michaux, J., & Mouton, A. (15 April 2022). Evolutionary history of the Forest Dormouse (Dryomys nitedula) [Paper presentation]. International Dormouse Conference, Bulgaria. doi:10.3897/aca.5.e82809
Peer reviewed

chevret, P., renaud, S., quere, J. P., & Michaux, J. (2022). Structure génétique et morphométrie crânienne dans le genre Arvicola. Arvicola.
Peer reviewed

Van Leeuwen, P., Schulte-Hostedde, A. I., Fournier-Chambrillon, C., Aranda, C. M., Berthomieu, L., Fournier, P., & Michaux, J. (2021). Conservation Genetics and Gut Microbial Communities’ Variability of the Critically Endangered European Mink Mustela Lutreola: Implications for Captive Breeding Programs. Research Square. doi:10.21203/rs.3.rs-932275/v1
Peer reviewed

Fagbemi, M. N. A., Pigneur, L.-M., André, A., Smitz, N., Gennotte, V., Michaux, J., Mélard, C., Lalèyè, A. P., & Rougeot, C. (2021). Genetic structure of wild and farmed Nile tilapia (Oreochromis niloticus) populations in Benin based on genome wide SNP technology. Aquaculture. doi:10.1016/j.aquaculture.2021.736432
Peer Reviewed verified by ORBi

Szewczyk, M., Nowak, C., Hulva, P., Mergeay, J., Stronen, A., Bolfíková, B., Czarnomska, S., Diserens, T., Fenchuk, V., Figura, M., de Groot, A., Haidt,, A., Hansen, M., Jansman, H., Kluth, G., Kwiatkowska, I., Lubińska, K., Michaux, J., Niedźwiecka, N., ... Mysłajek, R. (2021). Genetic support for the current discrete conservation unit of the Central European wolf population. Wildlife Biology. doi:10.2981/wlb.00809
Peer Reviewed verified by ORBi

LIM, M., BLANC, F., Michaux, J., pigneur, L. M., gillet, F., marc, D., poncet, E., & nemoz, E. (2021). Étude comparative de la densité et du déplacement des Desmans des Pyrénées Galemys pyrenaicus (É. Geoffroy Saint-Hilaire, 1811) par une méthode non invasive. Naturae.
Peer reviewed

Skorupski, J., Michaux, J., & Śmietana, P. (2021). A meta-analytical investigation of the gap between measured and predicted inter-population genetic diversity in species of high conservation concern - the case of the critically endangered European mink Mustela lutreola L., 1761. Genes, 12(10). doi:10.3390/genes12101555
Peer Reviewed verified by ORBi

Welter, D., Ruaud, A., Henzeler, Z., De jong, H., Van Coeverden de Groot, P., Michaux, J., Gormezano, L., Waters, J., Youngblut, L., & Ley, R. (2021). Free-living, psychrotrophic bacteria of the genus Psychrobacter are descendents of pathobionts. mSystems. doi:10.1128/mSystems.00258-21
Peer Reviewed verified by ORBi

Michaux, J., Dyck, M., Loughed, S., & Van coeverden de Groot, P. (2021). New insights on polar bear (Ursus maritimus) diet from faeces based on Next Generation Sequencing technologies. Arctic, 74 (1), 87-99. doi:10.14430/arctic72239
Peer Reviewed verified by ORBi

Subrata, S., Siregar, S., André, A., & Michaux, J. (2021). Identifying prey of the Javan mongoose (Urva javanica) in Java from fecal samples using next‑generation sequencing. Mammalian Biology. doi:10.1007/s42991-020-00086-y
Peer Reviewed verified by ORBi

Andre, A., Michaux, J., Gaitan, J., & Millien, V. (2021). Long-term stress level in a small mammal species undergoing range expansion. Mammalia. doi:10.1515/mammalia-2020-0041
Peer Reviewed verified by ORBi

Andriollo, T., Michaux, J., & Ruedi, M. (2021). Food for everyone: Differential feeding habits of cryptic bat species inferred from DNA metabarcoding. Molecular Ecology, 30 (18), 4584-4600. doi:10.1111/mec.16073
Peer Reviewed verified by ORBi

Latinne, A., Chen, H. W., Kuo, C. C., Singleton, G., Stuart, A., Malbas, A., Demanche, C., Chabe, M., Michaux, J., & Morand, S. (2021). Revisiting the Pneumocystis host specificity paradigm and transmission ecology in wild Southeast Asian rodents. Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases. doi:10.1016/j.meegid.2021.104978
Peer Reviewed verified by ORBi

Latinne, A., Navascués, M., Pavlenko, M., Kartavtseva, I., Ulrich, R., Tiouchichine, M.-L., Catteau, G., Sakka, H., Quéré, J. P., Chelomina, G., Bogdanov, A., Stanko, M., Hang, L., Neumann, K., Henttonen, H., & Michaux, J. (2020). Phylogeography of the striped field mouse, Apodemus agrarius (Rodentia: Muridae), throughout its distribution range in the Palaearctic region. Mammalian Biology. doi:10.1007/s42991-019-00001-0
Peer Reviewed verified by ORBi

chevret, P., Renaud, S., Helvaci, Z., Ulrich, R., Quere, J. P., & Michaux, J. (2020). Genetic structure, ecological versatility, and skull shape differentiation in Arvicola water voles (Rodentia, Cricetidae). Journal of Zoological Systematics and Evolutionary Research, 1. doi:10.1111/jzs.12384
Peer Reviewed verified by ORBi

Pigneur, L. M., Caublot, G., Fournier-Chambrillon, C., Fournier, P., Girralda-Carrera, G., Grémillet, X., Le Roux, B., Marc, D., Simonnet, F., Smitz, N., Sourp, E., Steinmetz, J., Urra-Maya, F., & Michaux, J. (2019). Current genetic admixture between relictual populations might enhance the recovery of an elusive carnivore, the European otter (Lutra lutra). Conservation Genetics, https://doi.org/10.1007/s10592-019-01199-9. doi:10.1007/s10592-019-01199-9
Peer Reviewed verified by ORBi

Esson, C., Skerratt, L. F., Berger, L., Malmsten, J., Strand, T., Lundkvist, A., Jarhult, J. D., Michaux, J., Mijiddorj, T., Bayrakçısmith, R., Mishra, C., & Johansson, O. (2019). Health and zoonotic Infections of snow leopards Panthera unica in the South Gobi desert of Mongolia. Infection Ecology and Epidemiology, 9, 1604063. doi:10.1080/20008686.2019.1604063
Peer Reviewed verified by ORBi

Bourgarel, M., Noel, V., Pfukenyi, D., Becquart, P., Cerqueira, F., Barrachina, C., Boue, V., Talignani, L., Matope, G., Misse, D., Morand, S., Liegeois, F., Michaux, J., & Andre, A. (2019). Next-Generation Sequencing on Insectivorous Bat Guano: An Accurate Tool to Identify Arthropod Viruses of Potential Agricultural Concern. Viruses, 11, 2014. doi:10.3390/v11121102
Peer Reviewed verified by ORBi

Andriollo, T., Gillet, F., Michaux, J., & Ruedi, M. (2019). The menu varies with metabarcoding practices: a case study with the bat Plecotus auritus. PLoS ONE. doi:10.1371/journal.pone.0219135
Peer Reviewed verified by ORBi

Michaux, J., Hurner, H., Krystufek, B., Sara, M., Ribas, A., Ruch, T., Vekhnik, V., & Renaud, S. (2019). Consequence of past anthropogenic forest fragmentation on the genetic structure of European mammals: the example of the edible dormouse (Glis glis). Biological Journal of the Linnean Society, 126 (4), 836-851.
Peer Reviewed verified by ORBi

Michaux, J. (2018). The revolution of new genetic tools for the study of the ecology of rare or elusive species, using non-invasive approaches [Paper presentation]. Frontiers and Horizons in Ecology congress, Belfast, United Kingdom.

Fournier-Chambrillon, C., Torres, M., André, A., & Michaux, J. (2018). Severe parasitism by Versteria mustelae (Gmelin, 1790) in the critically endangered European mink Mustela lutreola (Linnaeus, 1761) in Spain. Parasitology Research, 117 (10). doi:10.1007/s00436-018-6043-z
Peer Reviewed verified by ORBi

Gailly, D., & Michaux, J. (2018). Population genetics and phylogeography of African Fruit Bats involved in ecology of Filoviridae (Ebola virus, Marburg virus) in West, Central and Southern Africa [Paper presentation]. Young Researchers Day 2018, Bruxelles, Belgium.

chevret, P., helvaci, Z., quere, J. P., renaud, S., & Michaux, J. (2018). Aquatic and terrestrial water voles: phylogeography and morphometrics [Poster presentation]. Congrès rodens & spatium, Potdsam, Germany.

chevret, P., Helzaci, Z., Quere, J. P., Renaud, S., & Michaux, J. (2018). Aquatic and terrestrial water voles: phylogeography and morphometrics [Paper presentation]. 40 ième colloque de la société française d'étude et de protection des mammifères (SFEPM), Caen, France.

Michaux, J. (2018). Why some species disappear and other expand? The example of the minks (M. lutreola and N. vison) and the European otter (Lutra lutra [Paper presentation]. Conservation Genetics congress, Vienne, Austria.

Young, G., Yap, M., Michaux, J., Steppan, S., & Stoye, J. (2018). Evolutionary journey of the retroviral restriction gene Fv1. Proceedings of the National Academy of Sciences of the United States of America, 115 (40), 10130-10135. doi:10.1073/pnas.1808516115
Peer Reviewed verified by ORBi

Pigneur, L. M., Michaux, J., Caublot, G., Fournier, P., Marc, D., Simmonet, F., & Jacob, G. (2018). Apport de la génétique pour l’étude de la dynamique des populations de Loutre d’Europe Lutra lutra (Linnaeus, 1758) en France. Naturae, 6, 63-70.
Peer reviewed

Smitz, N., Jouvenet, O., Ambwene Ligate, F., Crosmary, W., Ikanda, D., Chardonnet, P., Fusari, F., Meganck, K., Gillet, F., Melleti, M., & Michaux, J. (2018). A genome-wide data assessment of the African lion (Panthera leo) population genetic structure and diversity in Tanzania. PLoS ONE, 13 (11). doi:10.1371/journal.pone.0205395
Peer Reviewed verified by ORBi

Ledevin, R., Chevret, P., Helvaci, Z., Michaux, J., & Renaud, S. (2018). Bank Voles in Southern Eurasia: Vicariance and Adaptation. Journal of Mammalian Evolution, 25 (1), 119-129. doi:10.1007/s10914-016-9368-3
Peer Reviewed verified by ORBi

Andre, A., Mouton, A., Millien, V., & Michaux, J. (2018). Pathobiome of the Lyme disease principal reservoir in southern Quebec (Peromyscus leucopus) [Paper presentation]. Pathobiome 2018, Ajaccio, France.

Michaux, J., & Schenbrodt, G. (2018). Dipodidae family, In : Handbook of the Mammals of the World, Volume 7: Rodents II. In D. E. Wilson, T. E. Lacher, ... R. A. Mittermeier, Handbook of the Mammals of the World (pp. 1-30). Lynx.
Peer reviewed

André, A., Mouton, A., millien, V., & Michaux, J. (2017). Liver microbiome of Peromyscus leucopus, a key reservoir host species for emerging infectious diseases in North America. Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases. doi:10.1016/j.meegid.2017.04.011
Peer Reviewed verified by ORBi

Gillet, F., Cabria, M., Blanc, F., Fournier-Chambrillon, C., Nemoz, M., Sourp, E., Vial-Novella, C., Zardoya, R., Aulagnier, S., & Michaux, J. (2017). Evidence of a fine-scale genetic structure for the endangered Pyrenean desman (Galemys pyrenaicus) in the French Pyrenees. Journal of Mammalogy. doi:10.1093/jmammal/gyx002
Peer Reviewed verified by ORBi

Michaux, J. (2017). Expand or disappear ? Why related Mustelid species follow different roads. Lessons from the genetic study of minks, polecat and otter [Paper presentation]. European Mustelid Colloquium, Lyon, France.

Michaux, J. (2017). The revolution of new genetic tools for the study of the ecology of rare or elusive species, using non-invasive approaches [Paper presentation]. The 9th International zoological congress of Grigore Antipa Museum, Bucarest, Romania.

Biffi, M., Laffaille, P., Jabiol, J., André, A., Gillet, F., Lamothe, S., Michaux, J., & Buisson, L. (2017). Comparison of diet and prey selectivity of the Pyrenean desman and the Eurasian water shrew using next-generation sequencing methods. Mammalian Biology, 87, 176-184. doi:10.1016/j.mambio.2017.09.001
Peer Reviewed verified by ORBi

Neumann, K., Yiğit, N., Fritzsche, P., Çolak, E., Feoktistova, N., Surov, A., & Michaux, J. (2017). Genetic structure of the Turkish hamster (Mesocricetus brandti). Mammalian Biology, 86, 84-91. doi:10.1016/j.mambio.2017.06.004
Peer Reviewed verified by ORBi

André, A., millien, V., Galan, M., ribas, A., & Michaux, J. (2017). Effects of parasite and historic driven selection on the diversity and structure of a MHC-II gene in a small mammal species (Peromyscus leucopus) undergoing range expansion. Evolutionary Ecology. doi:10.1007/s10682-017-9898-z
Peer Reviewed verified by ORBi

Biffi, M., Gillet, F., Lafaille, P., Aulagnier, S., Blanc, F., Colas, F., Galan, M., Némoz, M., Tiouchichine, M. L., Buisson, L., & Michaux, J. (2017). Novel insights into the diet of the Pyrenean desman Galemys pyrenaicus using next-generation sequencing molecular analyses. Journal of Mammalogy, 87, 176-184. doi:10.1093/jmammal/gyx070
Peer Reviewed verified by ORBi

Esson, C., Michaux, J., Johansson, Ö., Malmsten, J., Lkhagvajav, P., & Samelius, G. (2017). The importance of genetic tools when studying the distribution of rare and elusive species illustrated by the Kam dwarf hamster. Global Ecology and Conservation, 12, 166-169. doi:10.1016/j.gecco.2017.11.003
Peer Reviewed verified by ORBi

Michaux, J. (2017). An overview of genetic tools to study biodiversity and health, from the hosts to the vectors and their pathogens [Paper presentation]. Wildlife-livestock-human health in Indonesia: identifying priorities for research and higher education partnerships, Yogyakarta, Indonesia.

Pigneur, L. M., Gillet, F., André, A., & Michaux, J. (2017). How can genetic tools contribute to the study and management of wild fauna? [Paper presentation]. Journées faunes, organisée par la faculté Agrobiotch, ULg, Gembloux, Belgium.

Oromi Farrús, N., Michaux, J., & Denoël, M. (05 October 2016). Facultative paedomorphosis in the palmate newt (Lissotriton helveticus) and the coexistence of two alternative phenotypes [Paper presentation]. XIV Congreso Luso-Español de Herpetologia, Lleida, Spain.
Peer reviewed

Oromi Farrús, N., Michaux, J., & Denoël, M. (August 2016). High gene flow between alternative morphs and the evolutionary persistence of facultative paedomorphosis. Scientific Reports, 6, 32046. doi:10.1038/srep32046
Peer Reviewed verified by ORBi

Gillet, F., Mouton, A., Vanutryve, S., Blanc, F., Némoz, M., Fournier, P., Fournier Chambrillon, C., Marc, D., & Michaux, J. (May 2016). Evidence of Predation and possible competition among three semi aquatic species, the endangered Pyrenean desman (Galemys pyrenaicus), the aquatic shrew (Neomys fodiens) and the European otter (Lutra lutra) using next-generation sequencing methods from faeces [Poster presentation]. Congenomics conference, Porto, Portugal.

Michaux, J., & Smitz, N. (2016). EEffect of habitat fragmentation on the genetic structure of southern African populations of African buffalo (Syncerus caffer) [Poster presentation]. 9th International Wildlife Ranching Symposium, Skukuza, South Africa.

Smitz, N., & Michaux, J. (2016). Genetic structure of the African Buffalo, based on SNP markers [Paper presentation]. Conservation Congenomics 2016.

Mouton, A., Espelta, J. M., Baurain, D., & Michaux, J. (2016). Using Next Generation Sequencing to characterize species diets: a study case with faeces of wild boar in the Spanish Pyrenees [Poster presentation]. Congenomics conference, Porto, Portugal.

Ovidio, M., Hanzen, C., Gennotte, V., Michaux, J., Benitez, J.-P., & Dierckx, A. (2016). Is adult translocation a credible way to accelerate the recolonization process of Chondrostoma nasus in a rehabilitated river? Cybium, 40 (1), 43-49.
Peer Reviewed verified by ORBi

Mouton, A., Grill, A., Mortelliti, A., Sara, M., Krystufek, B., Buchner, S., Lang, J., Adamik, P., Randi, E., Amori, G., Elmeros, M., Verbeylen, G., Dorenbosch, M., Schulz, B., Aloise, G., Matur, F., & Michaux, J. (2016). New insight in the evolutionary history of the common dormouse, Muscardinus avellanarius: a new cryptic species? Conservation Genetics.
Peer Reviewed verified by ORBi

Pigneur, L. M., & Michaux, J. (2016). Etude des processus de recolonisation de la loutre européenne (Lutra lutra) en France à partir de marqueurs génétiques microsatellites [Paper presentation]. Colloque restituation plan national action loutre, ministère environnement, Limoge, France.

Colak, E., Karacan, G., Kandemir, I., Colak, E., Kankilic, T., Yigit, N., & Michaux, J. (2016). Genetic variations of Turkish bank vole, Myodes glareolus (Mammalia: Rodentia) inferred from mtDNA. Mitochondrial DNA: the Journal of DNA Mapping, Sequencing, and Analysis. doi:10.3109/19401736.2015.1089537
Peer Reviewed verified by ORBi

Niccolo, A., Michaux, J., Fabre, P.-H., Morand, S., Aplin, K., Kyriakos, T., Lober, U., Fitriana, Y., Gono, S., Yasuko, I., Helgen, K., Roca, A., Eiden, M., & Greenwood, A. (2016). An endogenous gibbon ape leukemia virus (GALV) identified in a rodent (Melomys sp.) from Indonesia. Journal of Virology, sous presse.
Peer Reviewed verified by ORBi

Andre, A., Mouton, A., Millien, V., & Michaux, J. (2016). Study of the microbiome from the lyme disease principal reservoir in southern Quebec (Peromyscus leucopus) [Poster presentation]. Pathobiome 2015: Pathogens in microbiotas in hosts, Paris, France.

Pigneur, L. M., & Michaux, J. (2016). Unravelling population structure and recent colonization history of an elusive carnivore, the Eurasian otter (Lutra lutra) in western France using microsatellites and Single-Nucleotide-Polymorphism (SNP) markers [Poster presentation]. Zoology Congress 2016, Anvers, Belgium.

Mouton, A., Mortelliti, A., Grill, A., Sara, M., Krystufek, B., Juskaitis, R., Latinne, A., Amori, G., Randi, E., Buchner, S., Schulz, B., Ehlers, S., Lang, J. S., Adamik, P., Verbeylen, G., Dorenbosch, M., Trout, R. C., Elmeros, M., Aloise, G., ... Michaux, J. (2016). Evolutionary history and species delimitations: a case study of the hazel dormouse, Muscardinus avellanarius. Conservation Genetics. doi:10.1007/s10592-016-0892-8
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Alfano, N., Michaux, J., Fabre, P.-H., Morand, S., Aplin, K., Tsangaras, K., Lober, U., Fitriana, Y., Semiadi, G., Ishida, Y., Helgen, K., Roca, A., Eiden, M., & Greenwood, A. (2016). An endogenous gibbon ape leukemia virus (GALV) identified in a rodent (Melomys sp.) from Indonesia. Journal of Virology.
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smitz, N., Van Hooft, P., Heller, R., Cornelis, D., Chardonnet, P., Kraus, R., Greyling, B., Crooijmans, R., Groenen, M., & Michaux, J. (2016). Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing. Mammalian Biology, 81, 595-603. doi:10.1016/j.mambio.2016.07.047
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Herman, J., Johannesdottir, F., Jones, E., McDevitt, A., Michaux, J., White, T., Wojcik, J., & Searle, J. (2016). Post-glacial colonization of Europe by the wood mouse, Apodemus sylvaticus: evidence of a northern refugium and dispersal with humans. Biological Journal of the Linnean Society. doi:10.1111/bij.12882
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Smitz, N., & Michaux, J. (2016). Population genomics of the Cape buffalo subspecies (Syncerus caffer caffer) of the Southern African region based on SNP markers [Paper presentation]. 2nd IUCN African Buffalo Symposium, Windhoek, Namibia.

André, A., Millien, V., & Michaux, J. (08 December 2015). From sample hunt to sequence processing, the journey of a biologist [Paper presentation]. wildlife, parasites and infectious diseases, Bangkok, Thailand.

Oromi Farrús, N., Michaux, J., & Denoël, M. (09 October 2015). Study of the coexistence pattern of two alternative phenotypes in the palmate newt (Lissotriton helveticus), the answer from microsatellite markers [Paper presentation]. Zoology 2015 (22nd Benelux Congress of Zoology), Amsterdam, Netherlands.
Peer reviewed

Gennotte, V., Prignon, C., Dierckx, A., Benitez, J.-P., Ovidio, M., Michaux, J., Flamand, M.-C., & Mélard, C. (2015). Etude de la diversité génétique et de l’état des stocks des populations de barbeaux et de hotus en Wallonie. Amélioration des techniques d’élevage en vue de repeuplements raisonnés et de transferts de connaissances vers les pisciculteurs. (FEP 32-1109-005). ULg - Université de Liège.

Latinne, A., Meynard, C., Morand, S., & Michaux, J. (18 August 2015). Past and future distributions of Southeast Asian murine rodents: the influence of climate changes [Paper presentation]. VIIth European Congress of Mammalogy, Stockholm, Sweden.

Gillet, F., Cabria Garrido, M. T., Blanc, F., Némoz, M., Fournier-Chambrillon, C., Sourp, E., Vial-Novella, C., Zardoya, R., Aulagnier, S., & Michaux, J. (05 August 2015). Evidence of a fine-scale genetic structure for the endangered Pyrenean desman (Galemys pyrenaicus) in the French Pyrenees [Poster presentation]. 27th International Congress for Conservation Biology 4th European Congress for Conservation Biology, Montpellier, France.

Renaud, S., Quere, J. P., & Michaux, J. (2015). Biogeographic variations in wood mice: Testing for the role of morphological variation as a line of least resistance to evolution. In P. Cox & L. Hautier (Eds.), Cambridge Studies in Morphology and Molecules: New Paradigms in Evolutionary Biology ‘Evolution of the Rodents: Advances in Phylogeny, Paleontology and Functional Morphology’. United States: Cambridge University Press. doi:10.1017/CBO9781107360150.012
Peer reviewed

Andre, A., Mouton, A., Millien, V., & Michaux, J. (July 2015). Study of the microbiome from the lyme disease principal reservoir in southern Quebec (Peromyscus leucopus) [Paper presentation]. Pathobiome conference.

André, A., Mouton, A., Millien, V., & Michaux, J. (25 June 2015). The microbiome from the Lyme disease principal reservoir host in southern Quebec (Peromyscus leucopus) [Poster presentation]. Pathobiome.

Morand, S., Bordes, F., Chen, H.-W., Claude, J., Cosson, J.-F., Galan, M., Czirják, G. Á., Greenwood, A. D., Latinne, A., Michaux, J., & Ribas, A. (2015). Global parasite and Rattus rodent invasions: The consequences for rodent-borne diseases. Integrative Zoology. doi:10.1111/1749-4877.12143
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Pisano, J., Condamine, F. L., Lebedev, V., Bannikova, A., Quéré, J.-P., Shenbrot, G. I., Pagès, M., & Michaux, J. (May 2015). Out of Himalaya: the impact of past Asian environmental changes on the evolutionary and biogeographical history of Dipodoidea (Rodentia). Journal of Biogeography, 42 (5), 856-870. doi:10.1111/jbi.12476
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Latinne, A., Meynard, C., Herbreteau, V., Waengsothorn, S., Morand, S., & Michaux, J. (27 April 2015). Influence of past and future climate changes on the distribution of three Southeast Asian murine rodents. Journal of Biogeography, 42 (9), 1714-1726. doi:10.1111/jbi.12528
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Pisano, J., Leblois, R., Charbonnel, N., Cosson, J.-F., Piry, S., Galan, M., Huitu, O., Henttonen, H., & Michaux, J. (22 April 2015). Testing the presence of a barrier to nuclear gene flow between two distant mitochondrial lineages of the bank vole (Myodes glareolus) in central finland [Poster presentation]. Genes, Ecosystems and Risk of Infection (GERI 2015) conference.

Blasdell, K., Bordes, F., Chaisiri, K., Chaval, Y., Claude, J., Cosson, J.-F., Latinne, A., Michaux, J., Morand, S., Pagès, M., & Tran, A. (30 March 2015). Progress on research on rodents and rodent-borne zoonoses in Southeast Asia. Wildlife Research, 42 (2), 98-107. doi:10.1071/WR14201
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Ovidio, M., Hanzen, C., Gennotte, V., Michaux, J., Benitez, J.-P., & Dierckx, A. (March 2015). Evaluation d’un test de translocation intra-rivière de hotu (Chondrostoma nasus) par biotélémétrie et caractérisation génétique individuelle [Paper presentation]. Sixièmes rencontres de l'ichtyologie en France, Paris, France.

Cabria, M., Gonzalez, E., Gomez-Moliner, B., Michaux, J., Skumatov, D., Kranz, A., Fournier, P., Palazon, S., & Zardoya, R. (2015). Patterns of genetic variation in the endangered European mink (Mustela lutreola L., 1761). BMC Evolutionary Biology, 15, 141. doi:10.1186/s12862-015-0427-9
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Lalis, A., Leblois, R., Liefrid, S., Ouarour, A., Reddy, B., Michaux, J., Hamani, A., denys, C., & Nicolas, V. (2015). New molecular data favour an anthropogenic introduction of the wood mouse (Apodemus sylvaticus) in North Africa. Journal of Zoological Systematics and Evolutionary Research, 54. doi:10.1111/jzs.12111
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Michaux, J. (2015). “Why some species disappear and other expand? The example of the minks and the European otter ” [Paper presentation]. International Zoological Congress of “Grigore Antipa” Museum, Bucarest, Romania.

Gillet, F., Cabria Garrido, M. T., Némoz, M., Blanc, F., Fournier-Chambrillon, C., Sourp, E., Vial-Novella, C., Aulagnier, S., & Michaux, J. (2015). PCR-RFLP identification of the endangered Pyrenean desman, Galemys pyrenaicus (Soricomorpha, Talpidae), based on faecal DNA. Mammalia. doi:10.1515/mammalia-2014-0093
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Michaux, J. (2015). Génétique de la conservation, de nouveaux outils et espoirs pour les espèces menacées ? [Paper presentation]. symposium biodiversité.

Charbonnel, A., Buisson, L., Biffi, M., D'Amico, F., Besnard, A., Aulagnier, S., Blanc, F., Gillet, F., Lacaze, V., Michaux, J., Nemoz, M., Page, C., Sanchez-Perez, J.-M., Sauvage, S., & Lafaille, P. (2015). Integrating hydrological features and 1 genetically validated occurrence data in occupancy 2 modeling of an endemic and endangered semi‐aquatic mammal species, Galemys pyrenaicus. 3 4. Biological Conservation.
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Hartmann, S., Hasenkamp, N., Mayer, J., Michaux, J., Morand, S., Mazzoni, C., Roca, A. L., & Greenwood, A. (2015). Endogenous murine leukemia retroviral variation across wild European and inbred strains of house mouse. BMC Genomics, DOI 10.1186/s12864-015-1766-z. doi:10.1186/s12864-015-1766-z
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Gillet, F., Tiouchichine, M.-L., Galan, M., Blanc, F., Némoz, M., Aulagnier, S., & Michaux, J. (2015). A new method to identify the endangered Pyrenean desman (Galemys pyrenaicus) and to study its diet, using next generation sequencing from faeces. Mammalian Biology, 80, 505-509. doi:10.1016/j.mambio.2015.08.002
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Demanche, C., Deville, M., Michaux, J., Barriel, V., Pinçon, C., Aliouat-Denis, C.-M., Pottier, M., Noël, C., Viscoglios, E., Aliouat, E. M., Dei-Cas, E., Morand, S., & Guillot, J. (2015). What do Pneumocystis organisms tell us about the phylogeography of their hosts? The case of the woodmouse Apodemus sylvaticus in continental Europe and western Mediterranean islands. PLoS ONE, DOI:10.1371. doi:10.1371/journal.pone.0120839
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Goffard, A., Demanche, C., Arthur, L., Pinçon, C., Michaux, J., & Dubuisson, J. (2015). Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats. Viruses, 7, 6279–6290. doi:10.3390/v7122937
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Pages, M., Fabre, P.-H., Chaval, Y., Mortelliti, A., Nicolas, V., Wells, K., Michaux, J., & Lazzari, V. (2015). Molecular phylogeny of South-East Asian arboreal murine rodents. Zoologica Scripta. doi:10.1111/zsc.12161
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Sakka, H., Henttonen, H., Baraket, G., Salhi-Hannachi, A., & Michaux, J. (2015). Phylogeography analysis and molecular evolution patterns of the nematode parasite Heligmosomum mixtum based on mitochondrial DNA sequences. Acta Parasitologica, 60 (1), 85-98. doi:10.1515/ap-2015-0011
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Pigneur, L. M., Dubuisson, C., Fournier-Chambrillon, C., Fournier, P., Laoué, E., Béreyziat, T., Dal Molin, A., Joubert, L., Lesclaux, P., Ruys, T., Morelec, J. Y., Bonnecaze, B., & Michaux, J. (2015). Etude génétique des populations férales de vison d'Amérique (Neovison vison) en France : résultats préliminaires [Paper presentation]. 38ième colloque francophone de mammalogie, Bordeaux, France.

Michaux, J. (2015). Interest of genetic barcoding approaches for the study of biodiversity and epidemiology [Paper presentation]. Workshop on “Wildlife, parasites and pathogens: from barcoding to disease ecology, Bangkok, Thailand.

Smitz, N., Cornélis, D., Chardonnet, P., Caron, A., de Garine-Wichatitsky, M., Jori, F., Mouton, A., Latinne, A., Pigneur, L.-M., & Michaux, J. (12 December 2014). Genetic structure of fragmented southern populations of African Cape Buffalo (Syncerus caffer caffer) based on microsatellite analysis [Poster presentation]. 21st Benelux Congress of Zoology.

Durieu, B., & Michaux, J. (12 December 2014). Evolutionary history of the wood mouse (Apodemus sylvaticus) in the Palearctic region, with emphasis on the colonization of the Orkney Islands and Iceland [Poster presentation]. Zoology 2014 - The 21st Benelux Congress of Zoology, Liège, Belgium.

Gennotte, V., Michaux, J., Prignon, C., Ovidio, M., & Mélard, C. (December 2014). Genetic structure of nase, Chondrostoma nasus, and common barbel, Barbus barbus (Teleostei, Cyprinidae) populations in South Belgium rivers: toward a rational management of conservation restocking [Poster presentation]. 21st Benelux Congress of Zoology, Liège, Belgium.

Gillet, F., Cabria Garrido, M. T., Blanc, F., Némoz, M., Fournier-Chambrillon, C., Sourp, E., Vial-Novella, C., Zardoya, R., Aulagnier, S., & Michaux, J. (December 2014). Evidence of a fine-scale genetic structure for the endangered Pyrenean desman (Galemys pyrenaicus) in the French Pyrenees [Poster presentation]. Zoology 2014.

Mouton, A., Renaud, S., & Michaux, J. (19 September 2014). When morphometrics meets genetics: the case of the hazel dormouse, Muscardinus avellanarius [Paper presentation]. 9th INternational dormouse conference 2014, Svendborg, Denmark.

André, A., millien, V., & Michaux, J. (May 2014). Biological characteristics of a rodent species in expansion [Paper presentation]. Genomes to biomes.

Latinne, A., Galan, M., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K., & Michaux, J. (2014). Diet analysis of Leopoldamys neilli, a cave-dwelling rodent in Southeast Asia, using Next-Generation Sequencing from feces. Journal of Cave and Karst Studies, 76 (2), 139-145. doi:10.4311/2013LSC0100
Peer reviewed

Senn, H., Ogden, R., Frosch, C., Syrůčková, A., Campbell-Palmer, R., Munclinger, P., Durka, W., Kraus, R. H. S., Saveljev, A. P., Nowak, C., Stubbe, A., Stubbe, M., Michaux, J., Lavrov, V., Samiya, R., Ulevicius, A., & Rosell, F. (2014). Nuclear and mitochondrial genetic structure in the Eurasian beaver (Castor fiber) - implications for future reintroductions. Evolutionary Applications, 7 (6), 645-662. doi:10.1111/eva.12162
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Pigneur, L.-M., Marc, D., Fournier, P., Fournier-Chambrillon, C., Steinmetz, J., Rieu, L., Giralda-Carrera, G., Urra, F., Van Doninck, K., & Michaux, J. (2014). La loutre en France et Navarre. Bulletin de liaison des Mammalogistes de Midi-Pyrénées, 117-123.
Peer reviewed

Mouton, A., Mortelliti, A., Grill, A., Maurizio, S., Kryštufek, B., Juškaitis, R., Latinne, A., Amori, G., Randi, E., Büchner, S., Schulz, B., Ehlers, S., Lang, J., Adamik, P., Verbeylen, G., Dorenbosch, M., Trout, R., Elmeros, M., Aloise, G., ... Michaux, J. (2014). Phylogenetic and morphometrics assessment of the evolutionary history of the hazel dormouse: Muscardinus avellanarius [Paper presentation]. 21st Benelux Congress of Zoology, Liege, Belgium.

Frosch, C., Kraus, R. H. S., Angst, C., Allgöwer, R., Michaux, J., Teubner, J., & Nowak, C. (2014). The genetic legacy of multiple beaver reintroductions in central Europe. PLoS ONE, 9 (5). doi:10.1371/journal.pone.0097619
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Michaux, J., tiouchichine, M. L., mikula, O., quere, J. P., macholan, M., & douzery, E. (2014). Molecular phylogeny of the whole Apodemus genus based on the complete mitochondrial genome and two nuclear genes [Paper presentation]. edenext congress, heraklion, Greece.

Smitz, N., Cornelis, D., Chardonnet, P., Caron, A., de Garine-Wichatitsky, M., Jori, F., Mouton, A., Latinne, A., Pigneur, L.-M., Melletti, M., Kanapeckas, K., Marescaux, J., Lopes pereira, C., & Michaux, J. (2014). Genetic structure of fragmented southern populations of African Cape buffalo (Syncerus caffer caffer). BMC Evolutionary Biology, 14, 203. doi:10.1186/s12862-014-0203-2
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Tsangaras, K., Wales, N., Sicheritz-Pontén, T., Rasmussen, S., Michaux, J., Ishida, Y., Morand, S., Kampmann, M.-L., Gilbert, M. T. P., & Greenwood, A. D. (2014). Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank). PLoS ONE, 9 (10). doi:10.1371/journal.pone.0109101
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pisano, J., Leboils, R., charbonnel, N., galan, M., henttonen, H., Hultu, O., & Michaux, J. (2014). Apparent absence of a barrier to nuclear gene flow in Central Finland between mitochondrial lineages of the bank vole (Myodes glareolus) [Poster presentation]. edenext congress.

Tsangaras, K., Kolokotronis, S.-O., Ulrich, R. G., Morand, S., Michaux, J., & Greenwood, A. D. (2014). Negative purifying selection drives prion and doppel protein evolution. Journal of Molecular Evolution, 79 (1-2), 12-20. doi:10.1007/s00239-014-9632-1
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Fontaine, M., Roland, K., Calves, I., Austerlitz, F., Palstra, F., Tolley, K., Ryan, M., Ferreira, M., Jauniaux, T., Llanova, A., Öztürk, A., Ridoux, V., Rogan, E., Sequeira, M., Siebert, U., Vikingsson, G., Borrell, A., Michaux, J., & Aguilar, A. (2014). Postglacial climate changes and rise of three ecotypes of harbour porpoises, Phocoena phocoena, in western Palearctic waters. Molecular Ecology. doi:10.1111/mec.12817
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André, A., gaitan, J., Millien, V., & Michaux, J. (2014). Étude du stress à long terme chez un rongeur (Peromyscus leucopus) [Poster presentation]. Colloque du CSBQ 2014.

Latinne, A., Chaval, Y., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K., Herbreteau, V., Morand, S., & Michaux, J. (01 November 2013). Is Leopoldamys neilli (Rodentia, Muridae) a synonym of Leopoldamys herberti? A reply to Balakirev et al. (2013). Zootaxa, 3731 (4), 589-598. doi:10.11646/zootaxa.3731.4.10
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Latinne, A., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K., & Michaux, J. (05 September 2013). Diversity and endemism of Murinae rodents in Thai limestone karsts. Systematics and Biodiversity, 11 (3), 323-344. doi:10.1080/14772000.2013.818587
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Latinne, A., Waengsothorn, S., & Michaux, J. (15 August 2013). Evolutionary history of Leopoldamys neilli, a karst endemic rodent in Southeast Asia, and implications for its conservation [Paper presentation]. 11th International Mammalogical Congress, Belfast, United Kingdom.

Pisano, J., Condamine, F. L., Lebedev, V., Bannikova, A., Quéré, J.-P., Shenbrot, G. I., Pagès, M., & Michaux, J. (August 2013). Out-of-Himalaya: evolutionary history of the Dipodoidea (Rodentia) evidence the impact of past Asian environmental changes [Paper presentation]. The 11th International Mammalogical Congress 2013, Belfast, Ireland.

Pisano, J., Leblois, R., Henttonen, H., Huitu, O., Charbonnel, N., Lundkvist, A., & Michaux, J. (August 2013). Apparent absence of a barrier to nuclear gene flow between mitochondrial lineages of the bank vole (Myodes glareolus) in Central Finland [Poster presentation]. The 11th International Mammalogical Congress 2013, Belfast, Ireland.

Gennotte, V., Ovidio, M., Michaux, J., Prignon, C., Poncin, P., Philippart, J.-C., & Mélard, C. (30 May 2013). Développement de repeuplements raisonnés en barbeaux et hotus : amélioration des techniques d'élevage et caractérisation de la diversité génétique des populations wallonnes [Paper presentation]. Apports scientifiques récents à la Gestion des Peuplements de Poissons et de leurs Habitats, Liège, Belgium.

Latinne, A., Waengsothorn, S., & Michaux, J. (13 March 2013). Specialists vs. Generalists in Thai limestone karsts: Comparative phylogeography of two Murinae rodents in Thailand [Paper presentation]. 2nd Southeast Asian Gateway Evolution, Berlin, Germany.

Pisano, J., Leblois, R., Henttonen, H., Galan, M., Charbonnel, N., Lundkvist, A., Olsson, G., & Michaux, J. (March 2013). Nuclear genetic structure of the bank vole (Myodes glareolus) in Fennoscandia with a particular emphasis on the mitochondrial contact zone - Preliminary results [Poster presentation]. EDENext annual meeting 2013.

Fabre, P.-H., Pagès, M., Musser, G. G., Fitriana, Y. S., Fjeldså, J., Jennings, A., Jønsson, K. A., Kennedy, J., Michaux, J., Semiadi, G., Supriatna, N., & Helgen, K. M. (2013). A new genus of rodent from wallacea (Rodentia: Muridae: Murinae: Rattini), and its implication for biogeography and Indo-Pacific Rattini systematics. Zoological Journal of the Linnean Society, 169 (2), 408-447. doi:10.1111/zoj.12061
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Navia, D., Mendonça, R. S., Ferragut, F., Miranda, L. C., Trincado, R. C., Michaux, J., & Navajas, M. (2013). Cryptic diversity in brevipalpus mites (tenuipalpidae). Zoologica Scripta, 42 (4), 406-426. doi:10.1111/zsc.12013
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Lebedev, V., Bannikova, A., Pagès, M., Pisano, J., Michaux, J., & Shenbrot, G. (2013). Molecular phylogeny and systematics of Dipodoidea: a test of morphology-based hypotheses. Zoologica Scripta, (3). doi:10.1111/zsc.12002
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Michaux, J. (2013). New advances on the phylogeography and molecular systematics of the Eurasian rodents2013. In Abstract book of the 13th Rodens & Spatium conference.
Peer reviewed

Gillet, F., Némoz, M., Blanc, F., Le Roux, B., Bodo, A., Fournier-Chambrillon, C., Fournier, P., Aulagnier, S., & Michaux, J. (January 2013). Desman des Pyrénées : Quand la génétique vient compléter les connaissances naturalistes [Paper presentation]. 4èmes Rencontres Naturalistes De Midi-Pyrénées.

Smitz, N., Berthouly, C., Cornélis, D., Heller, R., van Hooft, P., Chardonnet, P., Caron, A., Prins, H., van Vuuren, B. J., de Iongh, H., & Michaux, J. (2013). Pan-African Genetic Structure in the African Buffalo (Syncerus caffer): Investigating Intraspecific Divergence. PLoS ONE, 8 (2). doi:10.1371/journal.pone.0056235
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Pisano, J., Pages, M., Lebedev, V., Banikova, A., Shenbrot, G., & Michaux, J. (2013). Systematics and molecular phyulgeny of the Dipodidae superfamily (Rodentia, Mammalia). In Abstract book of the 13th Rodens & Spatium conference.
Peer reviewed

Michaux, J. (2013). Conservation genetics : new tools and hope for threatened species. In abstract book of the 6th European congress of mammalogy.
Peer reviewed

Van Coeverden de Groot, P., Wong, P., Harris, C., Dyck, M., Kamookak, L., Pagès, M., Michaux, J., & Boag, P. (2013). Toward a Noninvasive Inuit Polar Bear Survey: Genetic Data from Polar Bear Hair Snags. Wildlife Society Bulletin, 37 (2), 394-401.
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Mouton, A., Grill, A., Sara, M., krystufek, B., Randi, E., Amori, G., Juskaitis, R., Aloise, G., Mortelliti, A., Matur, F., Elmeros, M., Vilhelmesen, H., Verbeylen, G., Panchetti, F., & Michaux, J. (2013). Molecular phylogeographt of the common dormouse. In Abstract book of the 13th Rodens & Spatium conference.
Peer reviewed

Latinne, A., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K., & Michaux, J. (31 October 2012). Combined Mitochondrial and Nuclear Markers Revealed a Deep Vicariant History for Leopoldamys neilli, a Cave-Dwelling Rodent of Thailand. PLoS ONE, 7 (10), 47670. doi:10.1371/journal.pone.0047670
Peer Reviewed verified by ORBi

Gillet, F., Cabria Garrido, M. T., Némoz, M., Blanc, F., Bertrand, A., Gomez-Moliner, B. J., Gonzalez, E. G., Zardoya, R., Aulagnier, S., & Michaux, J. (August 2012). Development of noninvasive genetic identification methods and polymorphic microsatellites for the Pyrenean desman (Galemys pyrenaicus) [Poster presentation]. Petit Pois Déridé 2012.

Pisano, J., Pagès, M., Condamine, F., Lebedev, V., Bannikova, A., Shenbrot, G. I., & Michaux, J. (July 2012). Molecular phylogeny and evolutionary history of Dipodoidea (Rodentia, Mammalia) [Paper presentation]. The 13th Rodens et Spatium conference, Rovaniemi, Finland.

Pisano, J., Henttonen, H., Galan, M., Charbonnel, N., Olsson, G., & Michaux, J. (July 2012). Nuclear genetic structure of Myodes glareolus in Fennoscandia with a particular emphasis on the contact zones - Preliminary results [Poster presentation]. The 13th Rodens et Spatium conference, Rovaniemi, Finland.

Latinne, A., Waengsothorn, S., Herbreteau, V., & Michaux, J. (15 May 2012). Phylogeography and evolutionary history of Leopoldamys neilli, a Murinae rodent endemic to limestone karsts, in Thailand [Paper presentation]. Rodent survey: from trapping to pathogen screening, Bangkok, Thailand.

Harris, C., Van Coeverden De Groot, P., Kamookak, L., Pagès, M., Michaux, J., Dyck, M., Aglukkaq, W., Konana, G., & Boag, P. (April 2012). The optimization of microsatellite genotyping and genetic sexing of non-invasively collected polar bear tissue: Implications for monitoring and census [Paper presentation]. International Polar Year (IPY) 2012 Conference, Montréal, Canada.

Mouton, A., Grill, A., Sara, M., KRYŠTUFEK, B., Randi, E., Amori, G., JUŠKAITIS, R., Aloise, G., Mortelliti, A., Panchetti, F., & Michaux, J. (March 2012). Evidence of a complex phylogeographic structure in the common dormouse, Muscardinus avellanarius (Rodentia: Gliridae). Biological Journal of the Linnean Society, 105 (3), 648-664. doi:10.1111/j.1095-8312.2011.01807.x
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Pagès, M., Bazin, E., Galan, M., Chaval, Y., Claude, J., Herbreteau, V., Michaux, J., Piry, S., Morand, S., & Cosson, J.-F. (19 January 2012). Complex genetic structures between nascent species in Southeast Asian Black rats (Rattus rattus complex) [Paper presentation]. Séminaires LECA.

Ledevin, R., Quéré, J.-P., Michaux, J., & Renaud, S. (2012). Can tooth differentiation help to understand species coexistence? The case of wood mice in China. Journal of Zoological Systematics and Evolutionary Research, 50 (4), 315-327. doi:10.1111/j.1439-0469.2012.00666.x
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Malé, P.-J. G., Martin, J.-F., Galan, M., Deffontaine, V., Bryja, J., Cosson, J.-F., Michaux, J., & Charbonnel, N. (2012). Discongruence of Mhc and cytochrome b phylogeographical patterns in Myodes glareolus (Rodentia: Cricetidae). Biological Journal of the Linnean Society, 105 (4), 881-899. doi:10.1111/j.1095-8312.2011.01799.x
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Guillot, G., Renaud, S., Ledevin, R., Michaux, J., & Claude, J. (2012). A unifying model for the analysis of phenotypic, genetic, and geographic data. Systematic Biology, 61 (6), 897-911. doi:10.1093/sysbio/sys038
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Mouton, A., Grill, A., Sara, M., Krystufek, B., Randi, E., Amori, G., Juskaitis, R., Aloise, G., Mortelliti, A., Verbeylen, G., Panchetti, F., Poitevin, F., & Michaux, J. (2012). Using phylogeography to promote dormouse conservation: the case of Muscardinus avellanarius (Rodentia, Gliridae). Peckiana, 8.
Peer reviewed

Gillet, F., D'Amico, F., Blanc, F., Buisson, L., Cabria Garrido, M. T., Némoz, M., Lafaille, P., Aulagnier, S., & Michaux, J. (2012). Répartition spatiale du Desman des Pyrénées (Galemys pyrenaicus) en France et premier aperçu de sa structure génétique [Paper presentation]. 35ème Colloque francophone de mammalogie.

Helvaci, Z., Renaud, S., Ledevin, R., Adriaens, D., Michaux, J., Çolak, R., Kankiliç, T., Kandemir, I., Yiǧit, N., & Çolak, E. (2012). Morphometric and genetic structure of the edible dormouse (Glis glis): A consequence of forest fragmentation in Turkey. Biological Journal of the Linnean Society, 107 (3), 611-623. doi:10.1111/j.1095-8312.2012.01952.x
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Mouton, A., Grill, A., Sarà, M., Krystufek, B., Randi, E., Amori, G., Juskaitis, R., Aloise, G., Mortellliti, A., Matur, F., Elmeros, M., Vilhelmsen, H., Verbeylen, G., Schulz, B., Panchetti, F., & Michaux, J. (2012). Molecular phylogeography of the common dormouse, Muscardinus avellanarius [Paper presentation]. 13th Rodens and Spatium -International Conference on Rodent Biology conference, Rovaniemi, Finland.

Mouton, A., Verbeylen, G., & Michaux, J. (September 2011). Genetic diversity and population structure of the common dormouse, Muscardinus avellanarius, in Flanders region (Belgium) [Poster presentation]. International Dormouse Conference, Ostritz, Germany.

Latinne, A., Waengsothorn, S., Herbreteau, V., & Michaux, J. (21 July 2011). Evidence of complex phylogeographic structure for the threatened rodent Leopoldamys neilli endemic to limestone karsts of Thailand [Paper presentation]. VIth European Congress of Mammalogy, Paris, France.

Mouton, A., Renaud, S., & Michaux, J. (July 2011). When morphometrics meet genetics: the case of the common dormouse, Muscardinus avellanarius [Poster presentation]. VIth European Mammal Conference, Paris, France.

Pagès, M., Galan, M., Chaval, Y., Herbreteau, V., Morand, S., Michaux, J., & Cosson, J.-F. (July 2011). How many species in the Black rat complex (Rattus rattus sensu lato) in Southeast Asia? [Paper presentation]. 6th European Congress of Mammalogy, Paris, France.

Gillet, F., Cabria Garrido, M. T., Némoz, M., Blanc, F., Bertrand, A., Gomez-Moliner, B. J., Gonzalez, E. G., Zardoya, R., & Michaux, J. (July 2011). Development of non invasive genetic identification methods for the Pyrenean desman (Galemys pyrenaicus) and first study of its genetic structure in France [Poster presentation]. ECM 2011 VIth European Congress of Mammalogy, Paris, France.

Buzan, E., Pagès, M., Michaux, J., & Krystufek, B. (2011). Phylogenetic position of the Ohiya rat (Srilankamys ohiensis) based on mitochondrial and nuclear gene sequence analysis. Zoologica Scripta, 40 (6), 545-553. doi:10.1111/j.1463-6409.2011.00494.x
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Pagès, M., Latinne, A., & Michaux, J. (2011). Inter- and Intraspecific Genetic Biodiversity in South East Asian Rodents: New Insights for Their Conservation. In F. E. Zachos & J. C. Habel (Eds.), Biodiversity Hotspots (pp. 363-382). Berlin Heidelberg, Germany: Springer.
Peer reviewed

Dsouli-Aymes, N., Michaux, J., De Stordeur, E., Couloux, A., Veuille, M., & Duvallet, G. (2011). Global population structure of the stable fly (Stomoxys calcitrans) inferred by mitochondrial and nuclear sequence data. Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases, 11 (2), 334-342. doi:10.1016/j.meegid.2010.11.001
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Latinne, A., Waengsothorn, S., Herbreteau, V., & Michaux, J. (2011). Evidence of complex phylogeographic structure for the threatened rodent Leopoldamys neilli, in Southeast Asia. Conservation Genetics, 12, 1495-1511. doi:10.1007/s10592-011-0248-3
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Mouton, A., Grill, A., Sarà, M., Krystufek, B., Aloise, G., Amori, G., Panchetti, F., Randi, E., Verbeylen, G., Poitevin, F., & Michaux, J. (2011). Molecular phylogeography of the common dormouse, Muscardinus avellanarius [Paper presentation]. 8th International dormouse conference, Ostritz, Germany.

Cabria, M. T., Michaux, J., Gómez-Moliner, B. J., Skumatov, D., Maran, T., Fournier, P., López De Luzuriaga, J., & Zardoya, R. (2011). Bayesian analysis of hybridization and introgression between the endangered european mink (Mustela lutreola) and the polecat (Mustela putorius). Molecular Ecology, 20 (6), 1176-1190. doi:10.1111/j.1365-294X.2010.04988.x
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Kaleme, P. K., Bates, J. M., Belesi, H. K., Bowie, R. C. K., Gambalemoke, M., Kerbis-Peterhans, J., Michaux, J., Mwanga, J. M., Ndara, B. R., Taylor, P. J., & Van Vuuren, B. J. (2011). Origin and putative colonization routes for invasive rodent taxa in the democratic Republic of Congo. African Zoology, 46 (1), 133-145. doi:10.3377/004.046.0104
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Rivière-Dobigny, T., Herbreteau, V., Khamsavath, K., Douangboupha, B., Morand, S., Michaux, J., & Hugot, J. P. (2011). Preliminary assessment of the genetic population structure of the enigmatic species Laonastes aenigmamus (Rodentia: Diatomyidae). Journal of Mammalogy, 92 (3), 620-628. doi:10.1644/10-MAMM-A-028.1
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Michaux, J. (2011). Conservation genetics : new tools and hope for threatened species. In abstract book of the 6th European congress of mammalogy.
Peer reviewed

Latinne, A., Waengsothorn, S., Risterucci, A. M., & Michaux, J. (2011). Isolation, characterization and PCR multiplexing of polymorphic microsatellite markers in the threatened murine rodent, Leopoldamys neilli. Conservation Genetics Resources, 3, 511-513. doi:10.1007/s12686-011-9391-x
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Latinne, A., Waengsothorn, S., Herbreteau, V., & Michaux, J. (2011). Thai limestone karsts: an impending biodiversity crisis. In The 1st EnvironmentAsia International Conference.
Peer reviewed

Pagès, M., Corbet, G., Orth, A., Volobouev, V., Michaux, J., & Catzeflis, F. (2011). Morphological, chromosomal, and genic differences between sympatric Rattus rattus and Rattus satarae in South India. Journal of Mammalogy, 92 (3), 659–670. doi:10.1644/10-MAMM-A-033.1
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Dsouli, N., Delsuc, F., Michaux, J., De Stordeur, E., Couloux, A., Veuille, M., & Duvallet, G. (2011). Phylogenetic analyses of mitochondrial and nuclear data in haematophagous flies support the paraphyly of the genus Stomoxys (Diptera: Muscidae). Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases, 11 (3), 663-670. doi:10.1016/j.meegid.2011.02.004
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Latinne, A., Waengsothorn, S., Herbreteau, V., & Michaux, J. (23 September 2010). Investigating the intraspecific biodiversity of the threatened rodent Leopoldamys neilli in Southeast Asia [Paper presentation]. 14th Evolutionary Biology Meeting, Marseilles, France.

Mouton, A., Grill, A., Krystufek, B., Sarà, M., Amori, G., Panchetti, F., Randi, E., & Michaux, J. (19 May 2010). Evolutionary history of the common dormouse, Muscardinus avellanarius, in Europe. Implications for its conservation [Paper presentation]. Seminar on the 19th may, Vienna, Austria.

Pagès, M., Chaval, Y., Herbreteau, V., Waengsothorn, S., Cosson, J.-F., Hugot, J.-P., Morand, S., & Michaux, J. (April 2010). Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries [Paper presentation]. 4th International Conference on Rodent Biology and Management, Bloemfontein, South Africa.

François, S., Vidick, S., Sarlet, M., Michaux, J., Koteja, P., Desmecht, D., Stevenson, P. G., Vanderplasschen, A., & Gillet, L. (2010). Comparative study of Murid gamma-herpesvirus 4 infection in mice and in a natural host, the bank voles. Journal of General Virology. doi:10.1099/vir.0.023481-0
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Ledevin, R., Michaux, J., Deffontaine, V., Henttonen, H., & Renaud, S. (2010). Evolutionary history of the bank vole Myodes glareolus: a morphometric perspective. Biological Journal of the Linnean Society, 100 (3), 681-694. doi:10.1111/j.1095-8312.2010.01445.x
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Hurner, H., Krystufek, B., Sara, M., Ribas, A., Ruch, T., Sommer, R., Ivashkina, V., & Michaux, J. (2010). Mitochondrial phylogeography of the edible dormouse (Glis glis) in the western Palearctic region. Journal of Mammalogy, 91 (1), 233-242. doi:10.1644/08-MAMM-A-392R1.1
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Guérécheau, A., Ledevin, R., Henttonen, H., Deffontaine Deurbroeck, V., Michaux, J., Chevret, P., & Renaud, S. (2010). Seasonal variation in molar outline of bank voles: An effect of wear? Mammalian Biology. doi:10.1016/j.mambio.2009.03.013
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Chaval, Y., Dobigny, G., Michaux, J., Pagès, M., Corbisier, C., Cosson, J.-F., & Herbreteau, V. (2010). A multi-approach survey as the most reliable tool to accurately assess biodiversity: the example of Thai murine rodents. Kasetsart Journal. Natural Sciences, 44 (4), 590-603.
Peer reviewed

Berthouly-Salazar, C., Rognon, X., Van, T. N., Gely, M., Chi, C. V., Tixier-Boichard, M., Bed'Hom, B., Bruneau, N., Verrier, E., Maillard, J. C., & Michaux, J. (2010). Vietnamese chickens: a gate towards Asian genetic diversity. BMC Genetics, 11, 53. doi:10.1186/1471-2156-11-53
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Sakka, H., QUÉRÉ, J. P., Kartavtseva, I., Pavlenko, M., Chelomina, G., Atopkin, D., Bogdanov, A., & Michaux, J. (2010). Comparative phylogeography of four Apodemus species (Mammalia: Rodentia) in the Asian Far East: evidence of Quaternary climatic changes in their genetic structure. Biological Journal of the Linnean Society, 100 (4), 797-821. doi:10.1111/j.1095-8312.2010.01477.x
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Fontaine, M. C., Tolley, K. A., Michaux, J., Birkun, A. J., Ferreira, M., Jauniaux, T., Llavona, A., Ozturk, B., Ozturk, A. A., Ridoux, V., Rogan, E., Sequeira, M., Bouquegneau, J.-M., & Baird, S. J. E. (2010). Genetic and historic evidence for climate-driven population fragmentation in a top cetacean predator: the harbour porpoises in European water. Proceedings of the Royal Society. Biological Sciences, 277 (1695), 2829-37. doi:10.1098/rspb.2010.0412
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Pagès, M., Chaval, Y., Herbreteau, V., Waengsothorn, S., Cosson, J.-F., Hugot, J.-P., Morand, S., & Michaux, J. (2010). Refining the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries. BMC Evolutionary Biology, 10 (184), 184. doi:10.1186/1471-2148-10-184
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Mouton, A., Grill, A., Krystufek, B., Sara, M., Aloise, G., Amori, G., Panchetti, F., Randi, E., & Michaux, J. (September 2009). Molecular phylogeography of the common dormouse, Muscardinus avellanarius, in Europe [Paper presentation]. 11th International Congress on the zoogeography, ecology and evolution of the eastern mediterranean, Heraklion, Greece.

Pagès, M., Chaval, Y., Waengsothorn, S., Cosson, J.-F., Hugot, J.-P., Morand, S., & Michaux, J. (August 2009). Refining the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries [Poster presentation]. 12th European Society for Evolutionary Biology, Turin, Italy.

Latinne, A., Rivière, T., Pagès, M., & Michaux, J. (August 2009). Intraspecific biodiversity in South East asian rodents: new insights for their conservation [Poster presentation]. 10th International Congress of Mammalogy, Mendoza, Argentina.

Pagès, M., Latinne, A., Rivière, T., & Michaux, J. (28 March 2009). Inter and intra genetic biodiversity in South East asian rodents: new insights for their conservation [Paper presentation]. Symposium on Biodiversity hotspots, Evolution & Conservation, Luxembourg, Luxembourg.

Pagès, M., & Michaux, J. (20 March 2009). Rodent biodiversity in South East Asia: the case of the Rattini group and the endemic karst rodent, Laonastes aenigmamous [Paper presentation]. Séminaire du groupe PHYMOL, Institut des Sciences de Montpellier, Montpellier, France.

Huerner, H., Martin, J., Ribas, A., Arrizabalaga, A., & Michaux, J. (2009). Isolation, characterization and PCR multiplexing of polymorphic microsatellite markers in the edible dormouse, Glis glis. Molecular Ecology Resources, 9 (3), 885-887. doi:10.1111/j.1755-0998.2008.02365.x
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Dubey, S., Michaux, J., Brunner, H., Hutterer, R., & Vogel, P. (2009). False phylogenies on wood mice due to cryptic cytochrome-b pseudogene. Molecular Phylogenetics and Evolution, 50 (3), 633-41. doi:10.1016/j.ympev.2008.12.008
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Hürner, H., & Michaux, J. (2009). Ecology of the edible dormouse (Glis glis) in a western edge population in southern Belgium. Vie et Milieu, 59 (2), 243-250.
Peer reviewed

Deffontaine Deurbroeck, V., Ledevin, R., Fontaine, M., Quéré, J.-P., Renaud, S., Libois, R., & Michaux, J. (2009). A relict bank vole lineage highlights the biogeographic history of the Pyrenean region in Europe. Molecular Ecology. doi:10.1111/j.1365-294X.2009.04162.x
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Riviere-Dobigny, T., Doan, L. P., Quang, N. L., Maillard, J.-C., & Michaux, J. (2009). Species identification, molecular sexing and genotyping using non-invasive approaches in two wild bovids species: Bos gaurus and Bos javanicus. Zoo Biology, 28 (2), 127-36. doi:10.1002/zoo.20211
Peer reviewed

Latinne, A., & Michaux, J. (02 October 2008). Limestone karst rodents in Southeast Asia [Paper presentation]. Workshop Program PHC Franco-Thai "New methods and new concepts for the study of rodent biodiversity".

Cosson, J. F., Bryja, J., Deter, J., Galan, M., Chaval, Y., Henttonen, H., Hugot, J. P., Michaux, J., Morand, S., & Charbonnel, N. (2008). Susceptibility to hantavirus infection and MHC class II gene diversity in rodents. Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases, 8 (4), 19-S19.
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Nieberding, C. M., Durette-Desset, M.-C., Vanderpoorten, A., Casanova, J. C., Ribas, A., Deffontaine, V., Feliu, C., Morand, S., Libois, R., & Michaux, J. (2008). Geography and host biogeography matter for understanding the phylogeography of a parasite. Molecular Phylogenetics and Evolution, 47 (2), 538-54. doi:10.1016/j.ympev.2008.01.028
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Michaux, J. (2008). Phylogeographic history of north European mammals : implication on their genetic diversity and their conservation. In Abstract book of the 7th Baltic Theriological conference.
Peer reviewed

Hourlay, F., Libois, R., D'Amico, F., Sara, M., O'Halloran, J., & Michaux, J. (2008). Evidence of a highly complex phylogeographic structure on a specialist river bird species, the dipper (Cinclus cinclus). Molecular Phylogenetics and Evolution, 49 (2), 435-44. doi:10.1016/j.ympev.2008.07.025
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Cabria, M. T., Gomez-Moliner, B., Zardoya, R., & Michaux, J. (2008). Molecular analysis for hybrid detection between European mink (Mustela lutreola) and polecat (Mustela putorius). In abstract book of the 7th Baltic Theriological conference.
Peer reviewed

Henttonen, H., Buchy, P., Suputtamongkol, Y., Jittapalapong, S., Herbreteau, V., Laakkonen, J., Chaval, Y., Galan, M., Dobigny, G., Charbonnel, N., Michaux, J., Cosson, J.-F., Morand, S., & Hugot, J.-P. (2008). Recent discoveries of new hantaviruses widen their range and question their origins. Annals of the New York Academy of Sciences, 1149, 84-9. doi:10.1196/annals.1428.064
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Janssens, X., Fontaine, M. C., Michaux, J., Libois, R., de Kermabon, J., Defourny, P., & Baret, P. V. (2008). Genetic pattern of the recent recovery of European otters in southern France. Ecography, 31 (2), 176-186. doi:10.1111/j.0906-7590.2008.4936.x
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Fontaine, M. C., Baird, S. J. E., Piry, S., Ray, N., Tolley, K. A., Duke, S., Birkun, A., Ferreira, M., Jauniaux, T., Llavona, A., Ozturk, B., Ozturk, A. A., Ridoux, V., Rogan, E., Sequeira, M., Siebert, U., Vikingsson, G. A., Bouquegneau, J.-M., & Michaux, J. (25 July 2007). Rise of oceanographic barriers in continuous populations of a cetacean: the genetic structure of harbour porpoises in Old World waters. BMC Biology, 5, 30. doi:10.1186/1741-7007-5-30
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Renaud, S., & Michaux, J. (2007). Mandibles and molars of the wood mouse, Apodemus sylvaticus (L.): integrated latitudinal pattern and mosaic insular evolution. Journal of Biogeography, 34 (2), 339-355. doi:10.1111/j.1365-2699.2006.01597.x
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Dusfour, I., Michaux, J., Harbach, R. E., & Manguin, S. (2007). Speciation and phylogeography of the Southeast Asian Anopheles sundaicus complex. Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases, 7 (4), 484-93. doi:10.1016/j.meegid.2007.02.003
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Das, K., Drouguet, O., Fontaine, M., Holsbeek, L., Jauniaux, T., Michaux, J., Joiris, C., & Bouquegneau, J.-M. (2007). VIABILITY OF THE NORTHEAST ATLANTIC HARBOUR PORPOISE AND SEAL POPULATION (GENETIC AND ECOLOGICAL STUDY). (SCIENTIFIC SUPPORT PLAN FOR A SUSTAINABLE DEVELOPMENT POLICY). Politique Scientifique Fédérale.

Neumann, K., Michaux, J., Lebedev, V., Yigit, N., Colak, E., Ivanova, N., Poltoraus, A., Surov, A., Markov, G., Maak, S., Neumann, S., & Gattermann, R. (April 2006). Molecular phylogeny of the Cricetinae subfamily based on the mitochondrial cytochrome b and 12S rRNA genes and the nuclear vWF gene. Molecular Phylogenetics and Evolution, 39 (1), 135-148. doi:10.1016/j.ympev.2006.01.010
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Kotlìk, P., Deffontaine Deurbroeck, V., Mascheretti, S., Zima, J., Michaux, J., & Searle, J. (2006). A northern glacial refugium for bank voles (Clethrionomys glareolus). Proceedings of the National Academy of Sciences of the United States of America, 103 (40), 14860-14864. doi:10.1073/pnas.0603237103
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Nieberding, C. M., Morand, S., Libois, R., & Michaux, J. (2006). Parasites and the island syndrome: the colonization of the western Mediterranean islands by Heligmosomoides polygyrus (Dujardin, 1845). Journal of Biogeography, 33 (7), 1212-1222. doi:10.1111/j.1365-2699.2006.01503.x
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Christe, P., Morand, S., & Michaux, J. (2006). Implications for conservation biology. In S. Morand (Ed.), Micro-mammals and macroparasites: from evolutionary ecology to management (pp. 590-616). Tokyo, Japan: Springer-Verlag.
Peer reviewed

Hugot, J. P., Suputtamongkol, Y., Jittapalapong, S., Morand, S., Michaux, J., Cosson, J. F., Dobigny, G., & Herbreteau, V. (2006). Rodents biodiversity and associated infections in Southeast Asia. Genetics in Infectious Diseases, 8 (4), 19.
Peer reviewed

Dusfour, I., Michaux, J., & Manguin, S. (2006). Phylogeography of the Southeast Asian sundaicus complex inferred by differential evolution markers. American Journal of Tropical Medicine and Hygiene, 75 (5), 590.
Peer reviewed

Michaux, J., Bellinvia, E., & Lymberakis, P. (May 2005). Taxonomy, evolutionary history and biogeography of the broad-toothed field mouse (Apodemus mystacinus) in the eastern Mediterranean area based on mitochondrial and nuclear genes. Biological Journal of the Linnean Society, 85 (1), 53-63. doi:10.1111/j.1095-8312.2005.00469.x
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Michaux, J., Hardy, O. J., Justy, F., Fournier, P., Kranz, A., Cabria, M., Davison, A., Rosoux, R., & Libois, R. (2005). Conservation genetics and population history of the threatened European mink Mustela lutreola, with an emphasis on the west European population. Molecular Ecology, 14 (8), 2373-88. doi:10.1111/j.1365-294X.2005.02597.x
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Michaux, J., Libois, R., & Filippucci, M.-G. (2005). So close and so different: comparative phylogeography of two small mammal species, the yellow-necked fieldmouse (Apodemus flavicollis) and the woodmouse (Apodemus sylvaticus) in the Western Palearctic region. Heredity, 94 (1), 52-63. doi:10.1038/sj.hdy.6800561
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Fontaine, M., Baird, C., Stuart, J. E., Tolley, K. A., Duke, S., Oien, N. I., Vikingsson, G., Bloch, D., Siebert, U., Addink, M. J., Smeenk, C., Jauniaux, T., Rogan, E., Ridoux, V., Lavona, A., Sequeira, M., Ferreira, M., Birkun, A., Öztürk, B., ... Michaux, J. (2005). Phylogeography of Harbour Porpoise (Phocoena phocoena) in the Eastern North Atlantic and in the Black Sea Explored by the Analyses of Nuclear and Mitochondrial DNA [Poster presentation]. The 16th Biennial Conference on the Biology of Marine Mammals, San Diego, United States.

Nieberding, C. M., Libois, R., Douady, C. J., Morand, S., & Michaux, J. (2005). Phylogeography of a nematode (Heligmosomoides polygyrus) in the western Palearctic region: persistence of northern cryptic populations during ice ages? Molecular Ecology, 14 (3), 765-79. doi:10.1111/j.1365-294X.2005.02440.x
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Deffontaine Deurbroeck, V., Libois, R., Kotlík, P., Sommer, R., Nieberding, C., Paradis, E., Searle, J., & Michaux, J. (2005). Beyond the Mediterranean peninsulas: evidence of central European glacial refugia for a temperate forest mammal species, the bank vole (Clethrionomys glareolus). Molecular Ecology, 14 (6), 1727-1739. doi:10.1111/j.1365-294X.2005.02506.x
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Neumann, K., Michaux, J., Maak, S., Jansman, H. A. H., Kayser, A., Mundt, G., & Gattermann, R. (2005). Genetic spatial structure of European common hamsters (Cricetus cricetus)--a result of repeated range expansion and demographic bottlenecks. Molecular Ecology, 14 (5), 1473-83. doi:10.1111/j.1365-294X.2005.02519.x
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Nieberding, C., Morand, S., Libois, R., & Michaux, J. (2004). A Parasite Reveals Cryptic Phylogeographic History of Its Host: The Colonization of the Western Mediterranean Islands. Multidisciplinarity for Parasites, Vectors and Parasitic Diseases, 1, 279-286.
Peer reviewed

Michaux, J., Libois, R., Davison, A., Chevret, P., & Rosoux, R. (2004). Is the western population of the European mink, (Mustela lutreola), a distinct Management Unit for conservation? Biological Conservation, 115 (3), 357-367. doi:10.1016/S0006-3207(03)00151-4
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Nieberding, C., Morand, S., Douady, C., Libois, R., & Michaux, J. (2004). A parasite reveals cryptic phylogeographic history of its host. In P. Mas coma (Ed.), Abstract book the IX EUROPEAN MULTICOLLOQUIUM OF PARASITOLOGY.

Michaux, J., Libois, R., Paradis, E., & Filippucci, M.-G. (2004). Phylogeographic history of the yellow-necked fieldmouse (Apodemus flavicollis) in Europe and in the Near and Middle East. Molecular Phylogenetics and Evolution, 32 (3), 788-98. doi:10.1016/j.ympev.2004.02.018
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Nieberding, C., Morand, S., Libois, R., & Michaux, J. (2004). A parasite reveals cryptic phylogeographic history of its host. Proceedings of the Royal Society. Biological Sciences, 271 (1557), 2559-68. doi:10.1098/rspb.2004.2930
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Renaud, S., & Michaux, J. (2003). Adaptive latitudinal trends in the mandible shape of Apodemus wood mice. Journal of Biogeography, 30 (10), 1617-1628. doi:10.1046/j.1365-2699.2003.00932.x
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Michaux, J., Magnanou, E., Paradis, E., Nieberding, C., & Libois, R. (2003). Mitochondrial phylogeography of the Woodmouse (Apodemus sylvaticus) in the Western Palearctic region. Molecular Ecology, 12 (3), 685-97. doi:10.1046/j.1365-294X.2003.01752.x
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Michaux, J., Magnanou, E., Nieberding, C., & Libois, R. (2002). Phylogéographie mitochondriale du mulot sylvestre (Apodemus sylvaticus) dans la région paléarctique occidentale. Biosystema, Systématique et biogéographie, 20, 115-130.
Peer reviewed

Michaux, J., Chevret, P., Filippucci, M.-G., & Macholan, M. (2002). Phylogeny of the genus Apodemus with a special emphasis on the subgenus Sylvaemus using the nuclear IRBP gene and two mitochondrial markers: cytochrome b and 12S rRNA. Molecular Phylogenetics and Evolution, 23 (2), 123-36. doi:10.1016/S1055-7903(02)00007-6
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Michaux, J., De Bellocq, J. G., Sara, M., & Morand, S. (2002). Body size increase in insular rodent populations: a role for predators? Global Ecology and Biogeography Letters, 11 (5), 427-436. doi:10.1046/j.1466-822x.2002.00301.x
Peer reviewed

Filippucci, M. G., Macholan, M., & Michaux, J. (2002). Genetic variation and evolution in the genus Apodemus (Muridae : Rodentia). Biological Journal of the Linnean Society, 75 (3), 395-419. doi:10.1046/j.1095-8312.2002.00032.x
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Chevret, P., Catzeflis, F., & Michaux, J. (2001). "Acomyinae": new molecular evidences for a muroid taxon (Rodentia : Muridae). African Small Mammals, 109.
Peer reviewed

Michaux, J., Reyes, A., & Catzeflis, F. (2001). Evolutionary history of the most speciose mammals: molecular phylogeny of muroid rodents. Molecular Biology and Evolution, 18 (11), 2017-31. doi:10.1093/oxfordjournals.molbev.a003743
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Libois, R., Michaux, J., Ramalhinho, M. G., Maurois, C., & Sara, M. (2001). On the origin and systematics of the northern African wood mouse (Apodemus sylvaticus) populations: a comparative study of mtDNA restriction patterns. Canadian Journal of Zoology, 79 (8), 1503-1511. doi:10.1139/cjz-79-8-1503
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Michaux, J., Kinet, S., Filippucci, M. G., Libois, R., Besnard, A., & Catzeflis, F. (2001). Molecular identification of three sympatric species of wood mice (Apodemus sylvaticus, A-flavicollis, A-alpicola) in western Europe (Muridae : Rodentia). Molecular Ecology Notes, 1 (4), 260-263. doi:10.1046/j.1471-8278.2001.00098.x
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Michaux, J., & Catzeflis, F. (2000). The bushlike radiation of muroid rodents is exemplified by the molecular phylogeny of the LCAT nuclear gene. Molecular Phylogenetics and Evolution, 17 (2), 280-93. doi:10.1006/mpev.2000.0849
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Michaux, J., Sara, M., Libois, R., & Matagne, R.-F. (1998). Is the woodmouse (Apodemus sylvaticus) of sicily a distinct species? Belgian Journal of Zoology, 128 (2), 211-214.
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Michaux, J., Libois, R., Ramalhinho, M. G., & Maurois, C. (1998). On the mtDNA restriction patterns variation of the Iberian wood mouse (Apodemus sylvaticus). Comparison with other west Mediterranean populations. Hereditas, 129 (3), 187-94. doi:10.1111/j.1601-5223.1998.00187.x
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Michaux, J., Libois, R., & Fons, R. (1996). Différenciation génétique et morphologique du mulot, Apodemus sylvaticus, dans le bassin Méditerranéen occidental. Vie et Milieu, 46 (3-4), 193-203.
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Michaux, J., Filippucci, M. G., Libois, R., Fons, R., & Matagne, R.-F. (1996). Biogeography and taxonomy of Apodemus sylvaticus (the woodmouse) in the Tyrrhenian region: Enzymatic variations and mitochondrial DNA restriction pattern analysis. Heredity, 76 (Part 3), 267-277. doi:10.1038/hdy.1996.40
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Libois, R., Torrico, J., Ramalhinho, M. G., Michaux, J., Fons, R., & Mathias, M. D. L. (1996). Les populations de rats noirs insulaires de l'ouest de l'Europe. Essai préliminaire de caractérisation génétique (caryotype et ADN mitochondrial). Vie et Milieu, 46 (3-4), 213-218.
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