[en] Promoting endogenous neurogenesis for brain repair is emerging as a promising strategy to mitigate the functional impairments associated with various neurological disorders characterized by neuronal death. Diterpenes featuring tigliane, ingenane, jatrophane and lathyrane skeletons, frequently found in Euphorbia plant species, are known protein kinase C (PKC) activators and exhibit a wide variety of pharmacological properties, including the stimulation of neurogenesis. Microbial transformation of these diterpenes represents a green and sustainable methodology that offers a hitherto little explored approach to obtaining novel derivatives and exploring structure-activity relationships. In the present study, we report the biotransformation of euphoboetirane A (4) and epoxyboetirane A (5), two lathyrane diterpenoids isolated from Euphorbia boetica, by Mucor circinelloides MC NRRL3631. Our findings revealed the production of nine biotransformation products (6-14), including jatrophane derivatives originated through an unprecedented rearrangement from the parent lathyranes. The chemical structures and absolute configurations of the new compounds were elucidated through comprehensive analysis using NMR and ECD spectroscopy, as well as MS. The study evaluated how principal metabolites and their derivatives affect TGFα and NRG1 release, as well as their potential to promote proliferation or differentiation in cultures of NSC isolated from the SVZ of adult mice. In order to shed some light on the mechanisms underlying the ability of 12 as a neurogenic compound, the interactions of selected compounds with PKC δ-C1B were analyzed through molecular docking and molecular dynamics. Based on these, it clearly appears that the ability of compound 12 to form both acceptor and donor hydrogen bonds with certain amino acid residues in the enzyme pocket leads to a higher affinity compound-PKC complex, which correlates with the observed biological activity.
Escobar-Montaño, Felipe; Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain
Gómez Oliva, Ricardo ; Université de Liège - ULiège > GIGA > GIGA Neurosciences - Molecular Regulation of Neurogenesis ; Área de Fisiología, Facultad de Medicina, Universidad de Cádiz, Cádiz, Spain, Instituto de Investigación e Innovación Biomédica de Cádiz (INiBICA), Cádiz, Spain
Ezzanad, Abdellah; Instituto Universitario de Investigación en Biomoléculas, Universidad de Cádiz, Puerto Real Cádiz, Spain
Vázquez de Górgolas, Sonia; Área de Fisiología, Facultad de Medicina, Universidad de Cádiz, Cádiz, Spain
Zorrilla, David; Departamento de Química Física, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain, Instituto Universitario de Microscopía Electrónica y Materiales, Universidad de Cádiz, Puerto Real Cádiz, Spain
Macías-Sánchez, Antonio J; Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain, Instituto Universitario de Investigación en Biomoléculas, Universidad de Cádiz, Puerto Real Cádiz, Spain
Botubol-Ares, José M; Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain, Instituto Universitario de Investigación Vitivinícola y Agroalimentaria, Universidad de Cádiz, Puerto Real Cádiz, Spain. Electronic address: josemanuel.botubol@uca.es
Nunez-Abades, Pedro; Departamento de Fisiología, Universidad de Sevilla, Sevilla, Spain
Castro, Carmen; Área de Fisiología, Facultad de Medicina, Universidad de Cádiz, Cádiz, Spain, Instituto de Investigación e Innovación Biomédica de Cádiz (INiBICA), Cádiz, Spain
Durán-Patrón, Rosa; Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain, Instituto Universitario de Investigación en Biomoléculas, Universidad de Cádiz, Puerto Real Cádiz, Spain. Electronic address: rosa.duran@uca.es
Hernández-Galán, Rosario; Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Cádiz, Puerto Real Cádiz, Spain, Instituto Universitario de Investigación en Biomoléculas, Universidad de Cádiz, Puerto Real Cádiz, Spain
Language :
English
Title :
Effect of lathyrane-type diterpenoids in neural stem cell physiology: Microbial transformations, molecular docking and dynamics studies.
Junta de Andalucía MICINN - Ministerio de Ciencia, Innovación y Universidades
Funding text :
This research was co-financed by grants PID2022-142418OB-C22 and PID2022-142418OB-C21, funded by MCIN/AEI/ 10.13039/501100011033 and ERDF Operational Program, and by grant P18-RT-2655, funded by the Department of Economic Transformation, Industry, Knowledge, and Universities of the Regional Government of Andalusia.
Stone, M.J., Williams, D.H., On the evolution of functional secondary metabolites (natural products). Mol. Microbiol. 6 (1992), 29–34, 10.1111/j.1365-2958.1992.tb00834.x.
Ancajas, C.M.F., Oyedele, A.S., Butt, C.M., Walker, A.S., Advances, opportunities, and challenges in methods for interrogating the structure activity relationships of natural products. Nat. Prod. Rep., 2024, 10.1039/D4NP00009A.
Mendes, E., Ramalhete, C., Duarte, N., Myrsinane-type diterpenes: A comprehensive review on structural diversity, chemistry and biological activities. Int. J. Mol. Sci., 25, 2024, 147, 10.3390/ijms25010147.
Benjamaa, R., Moujanni, A., Kaushik, N., Choi, E.H., Essamadi, A.K., Kaushik, N.K., Euphorbia species latex: A comprehensive review on phytochemistry and biological activities. Front. Plant Sci., 13, 2022, 1008881 https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2022.1008881.
Zhan, Z., Li, S., Chu, W., Yin, S., Euphorbia diterpenoids: Isolation, structure, bioactivity, biosynthesis, and synthesis (2013–2021). Nat. Prod. Rep. 39 (2022), 2132–2174, 10.1039/D2NP00047D.
Kemboi, D., Siwe-Noundou, X., Krause, R.W.M., Langat, M.K., Tembu, V.J., Euphorbia diterpenes: An update of isolation, structure, pharmacological activities and structure–activity relationship. Molecules, 26, 2021, 5055, 10.3390/molecules26165055.
Durán-Peña, M.J., Botubol Ares, J.M., Collado, I.G., Hernández-Galán, R., Biologically active diterpenes containing a gem-dimethylcyclopropane subunit: an intriguing source of PKC modulators. Nat. Prod. Rep. 31 (2014), 940–952, 10.1039/C4NP00008K.
Vasas, A., Hohmann, J., Euphorbia diterpenes: Isolation, structure, biological activity, and synthesis (2008–2012). Chem. Rev. 114 (2014), 8579–8612, 10.1021/cr400541j.
Vela, F., Ezzanad, A., Hunter, A.C., Macías-Sánchez, A.J., Hernández-Galán, R., Pharmacological potential of lathyrane-type diterpenoids from phytochemical sources. Pharmaceuticals, 15, 2022, 780, 10.3390/ph15070780.
Xiao, Y., Ji, W.-S., Jin, W.-K., Wen, P., Shan, L.-H., Hou, Z.-R., Li, X.-H., Zhou, X.-L., Liu, Y.-J., Xu, J.-B., Gao, F., Synthesis, antiproliferative and anti-MDR activities of lathyrane diterpene derivatives based on configuration inversion strategy. Bioorg. Chem., 131, 2023, 106329, 10.1016/j.bioorg.2022.106329.
Ye, Y., Liu, G.-H., Dawa, D., Ding, L.-S., Cao, Z.-X., Zhou, Y., Cytotoxic diterpenoids from the roots of Euphorbia stracheyi. Phytochem. Lett. 36 (2020), 183–187, 10.1016/j.phytol.2020.03.002.
Wang, Y., Song, Z., Guo, Y., Xie, H., Zhang, Z., Sun, D., Li, H., Chen, L., Diterpenoids from the seeds of Euphorbia lathyris and their anti-inflammatory activity. Bioorg. Chem., 112, 2021, 104944, 10.1016/j.bioorg.2021.104944.
Daoubi, M., Marquez, N., Mazoir, N., Benharref, A., Hernández-Galán, R., Muñoz, E., Collado, I.G., Isolation of new phenylacetylingol derivatives that reactivate HIV-1 latency and a novel spirotriterpenoid from Euphorbia officinarum latex. Bioorg. Med. Chem. 15 (2007), 4577–4584, 10.1016/j.bmc.2007.04.009.
Avila, L., Pérez, M., Sánchez-Duffhues, G., Hernández-Galán, R., Muñoz, E., Cabezas, F., Quiñones, W., Torres, F., Echeverri, F., Effects of diterpenes from latex of Euphorbia lactea and Euphorbia laurifolia on human immunodeficiency virus type 1 reactivation. Phytochemistry 71 (2010), 243–248, 10.1016/j.phytochem.2009.10.005.
Yan, S.-L., Li, Y.-H., Chen, X.-Q., Liu, D., Chen, C.-H., Li, R.-T., Diterpenes from the stem bark of Euphorbia neriifolia and their in vitro anti-HIV activity. Phytochemistry 145 (2018), 40–47, 10.1016/j.phytochem.2017.10.006.
Domínguez-García, S., Geribaldi-Doldán, N., Gómez-Oliva, R., Ruiz, F.A., Carrascal, L., Bolívar, J., Verástegui, C., Garcia-Alloza, M., Macías-Sánchez, A.J., Hernández-Galán, R., Nunez-Abades, P., Castro, C., A novel PKC activating molecule promotes neuroblast differentiation and delivery of newborn neurons in brain injuries. Cell. Death Dis., 11, 2020, 262, 10.1038/s41419-020-2453-9.
Murillo-Carretero, M., Geribaldi-Doldán, N., Flores-Giubi, E., García-Bernal, F., Navarro-Quiroz, E.A., Carrasco, M., Macías-Sánchez, A.J., Herrero-Foncubierta, P., Delgado-Ariza, A., Verástegui, C., Domínguez-Riscart, J., Daoubi, M., Hernández-Galán, R., Castro, C., ELAC (3,12-di-O-acetyl-8-O-tigloilingol), a plant-derived lathyrane diterpene, induces subventricular zone neural progenitor cell proliferation through PKCβ activation. Br. J. Pharmacol. 174 (2017), 2373–2392, 10.1111/bph.13846.
Geribaldi-Doldán, N., Carrascal, L., Pérez-García, P., Oliva-Montero, J.M., Pardillo-Díaz, R., Domínguez-García, S., Bernal-Utrera, C., Gómez-Oliva, R., Martínez-Ortega, S., Verástegui, C., Nunez-Abades, P., Castro, C., Migratory response of cells in neurogenic niches to neuronal death: The onset of harmonic repair?. Int. J. Mol. Sci., 24, 2023, 6587, 10.3390/ijms24076587.
Grade, S., Götz, M., Neuronal replacement therapy: previous achievements and challenges ahead. Npj Regenerative Medicine, 2, 2017, 29, 10.1038/s41536-017-0033-0.
Rabaneda, L.G., Geribaldi-Doldán, N., Murillo-Carretero, M., Carrasco, M., Martínez-Salas, J.M., Verástegui, C., Castro, C., Altered regulation of the Spry2/Dyrk1A/PP2A triad by homocysteine impairs neural progenitor cell proliferation. Bioch. Biophys. Acta – Mol. Cell Res., 1863 (2016), 3015–3026, 10.1016/j.bbamcr.2016.09.018.
Rahman, A.A., Amruta, N., Pinteaux, E., Bix, G.J., Neurogenesis after stroke: A therapeutic perspective. Translational Stroke Research 12 (2021), 1–14, 10.1007/s12975-020-00841-w.
García-Bernal, F., Geribaldi-Doldán, N., Domínguez-García, S., Carrasco, M., Murillo-Carretero, M., Delgado-Ariza, A., Díez-Salguero, M., Verástegui, C., Castro, C., Protein kinase C inhibition mediates neuroblast enrichment in mechanical brain injuries. Front. Cell. Neurosci., 12, 2018, 10.3389/fncel.2018.00462.
Moreno-Jiménez, E.P., Flor-García, M., Terreros-Roncal, J., Rábano, A., Cafini, F., Pallas-Bazarra, N., Ávila, J., Llorens-Martín, M., Adult hippocampal neurogenesis is abundant in neurologically healthy subjects and drops sharply in patients with Alzheimer's disease. Nature Medicine 25 (2019), 554–560, 10.1038/s41591-019-0375-9.
Gómez-Oliva, R., Martínez-Ortega, S., Atienza-Navarro, I., Domínguez-García, S., Bernal-Utrera, C., Geribaldi-Doldán, N., Verástegui, C., Ezzanad, A., Hernández-Galán, R., Nunez-Abades, P., García-Alloza, M., Castro, C., Rescue of neurogenesis and age-associated cognitive decline in SAMP8 mouse: Role of transforming growth factor-alpha. Aging Cell, 22, 2023, e13829.
Rodríguez-Moreno, C.B., Cañeque-Rufo, H., Flor-García, M., Terreros-Roncal, J., Moreno-Jiménez, E.P., Pallas-Bazarra, N., Bressa, C., Larrosa, M., Cafini, F., Llorens-Martín, M., Azithromycin preserves adult hippocampal neurogenesis and behavior in a mouse model of sepsis. Brain, Behavior, and Immunity 117 (2024), 135–148, 10.1016/j.bbi.2024.01.005.
Geribaldi-Doldán, N., Gómez-Oliva, R., Domínguez-García, S., Nunez-Abades, P., Castro, C., Protein kinase C: Targets to regenerate brain injuries?. Front. Cell and Dev. Biol., 7, 2019, 39, 10.3389/fcell.2019.00039.
Ezzanad, A., Gómez-Oliva, R., Escobar-Montaño, F., Díez-Salguero, M., Geribaldi-Doldan, N., Domínguez-García, S., Botubol-Ares, J.M., Reyes, C.D.L., Durán-Patrón, R., Nunez-Abades, P., Macías-Sánchez, A.J., Castro, C., Hernández-Galán, R., Phorbol diesters and 12-deoxy-16-hydroxyphorbol 13,16-diesters induce TGFα release and adult mouse neurogenesis. J. Med. Chem. 64 (2021), 6070–6084, 10.1021/acs.jmedchem.1c00156.
Flores-Giubi, E., Geribaldi-Doldán, N., Murillo-Carretero, M., Castro, C., Durán-Patrón, R., Macías-Sánchez, A.J., Hernández-Galán, R., Lathyrane, premyrsinane, and related diterpenes from Euphorbia boetica: Effect on in vitro neural progenitor cell proliferation. J. Nat. Prod. 82 (2019), 2517–2528, 10.1021/acs.jnatprod.9b00343.
Dang, M., Dubbin, K., D'Aiello, A., Hartmann, M., Lodish, H., Herrlich, A., Epidermal growth factor (EGF) ligand release by substrate-specific a disintegrin and metalloproteases (ADAMs) involves different protein kinase C (PKC) isoenzymes depending on the stimulus. J. Biol. Chem. 286 (2011), 17704–17713, 10.1074/jbc.M110.187823.
Codega, P., Silva-Vargas, V., Paul, A., Maldonado-Soto, A.R., DeLeo, A.M., Pastrana, E., Doetsch, F., Prospective identification and purification of quiescent adult neural stem cells from their in vivo niche. Neuron 82 (2014), 545–559, 10.1016/j.neuron.2014.02.039.
Domínguez-García, S., Gómez-Oliva, R., Geribaldi-Doldán, N., Hierro-Bujalance, C., Sendra, M., Ruiz, F.A., Carrascal, L., Macías-Sánchez, A.J., Verástegui, C., Hernández-Galán, R., García-Alloza, M., Nunez-Abades, P., Castro, C., Effects of classical PKC activation on hippocampal neurogenesis and cognitive performance: mechanism of action. Neuropsychopharmacol. 46 (2021), 1207–1219, 10.1038/s41386-020-00934-y.
Sheldon, R.A., Woodley, J.M., Role of biocatalysis in sustainable chemistry. Chem. Rev. 118 (2018), 801–838, 10.1021/acs.chemrev.7b00203.
Chhatrapati Bisen, A., Nashik Sanap, S., Agrawal, S., Biswas, A., Sankar Bhatta, R., Chemical metabolite synthesis and profiling: Mimicking in vivo biotransformation reactions. Bioorg. Chem., 139, 2023, 106722, 10.1016/j.bioorg.2023.106722.
De Sousa, I.P., Sousa Teixeira, M.V., Jacometti Cardoso Furtado, N.A., An overview of biotransformation and toxicity of diterpenes. Molecules, 23, 2018, 1387, 10.3390/molecules23061387.
Wu, Y., Yin, C., Cao, Y., Liu, X., Yu, J., Zhang, J., Yu, B., Cheng, Z., Regioselective hydroxylation of lathyrane diterpenoids biocatalyzed by microorganisms and its application in integrated synthesis. J. Mol. Cat., B Enzym. 133 (2016), S352–S359, 10.1016/j.molcatb.2017.02.008.
Liu, X., Cheng, Z., Microbial and chemical transformations of euphorbia factor L1 and the P-glycoprotein inhibitory activity in zebrafishes. Nat. Prod. Res. 37 (2023), 871–881, 10.1080/14786419.2022.2095379.
Xiao, S., Xu, X., Wei, X., Xin, J., Li, S., Lv, Y., Chen, W., Yuan, W., Xie, B., Zu, X., Shen, Y., Comprehensive metabolic profiling of Euphorbiasteroid in rats by integrating UPLC-Q/TOF-MS and NMR as well as microbial biotransformation. Metabolites, 12, 2022, 830, 10.3390/metabo12090830.
Escobar-Montaño, F., González-Rodríguez, V.E., Macías-Sánchez, A.J., Botubol-Ares, J.M., Durán-Patrón, R., Hernández-Galán, R., Enhancing structural diversity of lathyrane derivatives through biotransformation by the marine-derived actinomycete Streptomyces puniceus BC-5GB.11. Int. J. Mol. Sci., 25, 2024, 2289, 10.3390/ijms25042289.
Lu, J., Li, G., Huang, J., Zhang, C., Zhang, L., Zhang, K., Li, P., Lin, R., Wang, J., Lathyrane-type diterpenoids from the seeds of Euphorbia lathyris. Phytochemistry 104 (2014), 79–88, 10.1016/j.phytochem.2014.04.020.
Seco, J.M., Quiñoá, E., Riguera, R., A practical guide for the assignment of the absolute configuration of alcohols, amines and carboxylic acids by NMR. Tetrahedron: Asymmetry 12 (2001), 2915–2925, 10.1016/S0957-4166(01)00508-0.
Hevesi, L., Nagy, J.B., Krief, A., Derouane, E.G., 1H and 13C studies of alkenes, epoxides and cyclic thionocarbonates. Org. Magn. Reson. 10 (1977), 14–19, 10.1002/mrc.1270100105.
Chukovskaya, E.C., Dostovalova, V.I., Vasil'eva, T.T., Kh. Freidlina, R., 13C n.m.r. spectra of some polychloroalkenes. Org. Magn. Reson. 8 (1976), 229–232, 10.1002/mrc.1270080502.
Li, L., Huang, J., Lyu, H., Guan, F., Li, P., Tian, M., Xu, S., Zhao, X., Liu, F., Paetz, C., Feng, X., Chen, Y., Two lathyrane diterpenoid stereoisomers containing an unusual trans-gem-dimethylcyclopropane from the seeds of Euphorbia lathyris. RSC Advances 11 (2021), 3183–3189, 10.1039/d0ra10724g.
Li, X.-C., Ferreira, D., Ding, Y., Determination of absolute configuration of natural products: Theoretical calculation of electronic circular dichroism as a tool. Curr. Org. Chem. 14 (2010), 1678–1697, 10.2174/138527210792927717.
M.J. Frisch, G.W. Trucks, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, G. Scalmani, V. Barone, G.A. Petersson, H. Nakatsuji, X. Li, M. Caricato, A.V. Marenich, J. Bloino, B.G. Janesko, R. Gomperts, B. Mennucci, H.P. Hratchian, J.V. Ortiz, A.F. Izmaylov, J.L. Sonnenberg, Williams, F. Ding, F. Lipparini, F. Egidi, J. Goings, B. Peng, A. Petrone, T. Henderson, D. Ranasinghe, V.G. Zakrzewski, J. Gao, N. Rega, G. Zheng, W. Liang, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, T. Vreven, K. Throssell, J.A. Montgomery Jr., J.E. Peralta, F. Ogliaro, M.J. Bearpark, J.J. Heyd, E.N. Brothers, K.N. Kudin, V.N. Staroverov, T.A. Keith, R. Kobayashi, J. Normand, K. Raghavachari, A.P. Rendell, J.C. Burant, S.S. Iyengar, J. Tomasi, M. Cossi, J.M. Millam, M. Klene, C. Adamo, R. Cammi, J.W. Ochterski, R.L. Martin, K. Morokuma, O. Farkas, J.B. Foresman, D.J. Fox, Gaussian 16 Rev. C.01, (2016).
Romero-Grimaldi, C., Murillo-Carretero, M., López-Toledano, M.A., Carrasco, M., Castro, C., Estrada, C., ADAM-17/Tumor Necrosis Factor-α-Converting Enzyme Inhibits Neurogenesis and Promotes Gliogenesis from Neural Stem Cells. Stem Cells 29 (2011), 1628–1639, 10.1002/stem.710.
Geribaldi-Doldán, N., Carrasco, M., Murillo-Carretero, M., Domínguez-García, S., García-Cózar, F.J., Muñoz-Miranda, J.P., del Río-García, V., Verástegui, C., Castro, C., Specific inhibition of ADAM17/TACE promotes neurogenesis in the injured motor cortex. Cell Death Dis., 9, 2018, 862, 10.1038/s41419-018-0913-2.
Geribaldi-Doldán, N., Flores-Giubi, E., Murillo-Carretero, M., García-Bernal, F., Carrasco, M., Macías-Sánchez, A.J., Domínguez-Riscart, J., Verástegui, C., Hernández-Galán, R., Castro, C., 12-Deoxyphorbols promote adult neurogenesis by inducing neural progenitor cell proliferation via PKC activation. Int. J. Neuropsychopharmacol., 19, 2016, pyv085, 10.1093/ijnp/pyv085.
Kamezaki, A., Sato, F., Aoki, K., Asakawa, K., Kawakami, K., Matsuzaki, F., Sehara-Fujisawa, A., Visualization of Neuregulin 1 ectodomain shedding reveals its local processing in vitro and in vivo. Sci. Rep., 6, 2016, 28873, 10.1038/srep28873.
Encinas, J.M., Vaahtokari, A., Enikolopov, G., Fluoxetine targets early progenitor cells in the adult brain. Proc. Natl. Acad. Sci. 103 (2006), 8233–8238, 10.1073/pnas.0601992103.
Wu, N., Sun, X., Zhou, C., Yan, J., Cheng, C., Neuroblasts migration under control of reactive astrocyte-derived BDNF: a promising therapy in late neurogenesis after traumatic brain injury. Stem Cell Res. Ther., 14, 2023, 2, 10.1186/s13287-022-03232-0.
Liu, P.Z., Nusslock, R., Exercise-mediated neurogenesis in the hippocampus via BDNF. Front. Neurosci., 12, 2018, 52, 10.3389/fnins.2018.00052.
Zeng, C.-W., Zhang, C.-L., Neuronal regeneration after injury: a new perspective on gene therapy. Front. Neurosci., 17, 2023, 1181816, 10.3389/fnins.2023.1181816.
Tseng, H.-K., Su, Y.-Y., Lai, P.-J., Lo, S.-L., Liu, H.-C., Reddy, S.R., Chen, L., Lin, C.-C., Chemoenzymatic Synthesis of GAA-7 glycan analogues and evaluation of their neuritogenic activities. ACS Chem. Neurosci. 15 (2024), 656–670, 10.1021/acschemneuro.3c00732.
Zhang, G., Kazanietz, M.G., Blumberg, P.M., Hurley, J.H., Crystal structure of the Cys2 activator-binding domain of protein kinase Cδ in complex with phorbol ester. Cell 81 (1995), 917–924, 10.1016/0092-8674(95)90011-X.
Judge, P.T., Overall, S.A., Barnes, A.B., Insertion Depth Modulates Protein Kinase C-δ-C1b Domain Interactions with Membrane Cholesterol as Revealed by MD Simulations. International Journal of Molecular Sciences, 24, 2023, 4598, 10.3390/ijms24054598.
Ryckbosch, S.M., Wender, P.A., Pande, V.S., Molecular dynamics simulations reveal ligand-controlled positioning of a peripheral protein complex in membranes. Nature Communications, 8, 2017, 6, 10.1038/s41467-016-0015-8.
Witika, B.A., Poka, M.S., Demana, P.H., Matafwali, S.K., Melamane, S., Malungelo Khamanga, S.M., Makoni, P.A., Lipid-based nanocarriers for neurological disorders: A review of the state-of-the-art and therapeutic success to date. Pharmaceutics, 14, 2022, 836, 10.3390/pharmaceutics14040836.
Malmierca, M.G., Barua, J., McCormick, S.P., Izquierdo-Bueno, I., Cardoza, R.E., Alexander, N.J., Hermosa, R., Collado, I.G., Monte, E., Gutiérrez, S., Novel aspinolide production by Trichoderma arundinaceum with a potential role in Botrytis cinerea antagonistic activity and plant defence priming. Environ. Microbiol. 17 (2015), 1103–1118, 10.1111/1462-2920.12514.
Guimarães, D.O., Borges, W.S., Vieira, N.J., de Oliveira, L.F., da Silva, C.H.T.P., Lopes, N.P., Dias, L.G., Durán-Patrón, R., Collado, I.G., Pupo, M.T., Diketopiperazines produced by endophytic fungi found in association with two Asteraceae species. Phytochemistry 71 (2010), 1423–1429, 10.1016/j.phytochem.2010.05.012.
Collado, I.G., Hernández-Galán, R., Durán-Patrón, R., Cantoral, J.M., Metabolites from a shake culture of Botrytis cinerea. Phytochemistry 38 (1995), 647–650, 10.1016/0031-9422(94)00690-U.
Buddie, A.G., Martínez-Culebras, P., Bridge, P.D., García, M.D., Querol, A., Cannon, P.F., Monte, E., Molecular characterization of Colletotrichum strains derived from strawberry. Mycol. Res. 103 (1999), 385–394, 10.1017/S0953756298007254.
Virués-Segovia, J.R., Millán, C., Pinedo, C., González-Rodríguez, V.E., Papaspyrou, S., Zorrilla, D., Mackenzie, T.A., Ramos, M.C., de la Cruz, M., Aleu, J., Durán-Patrón, R., New eremophilane-type sesquiterpenes from the marine sediment-derived fungus Emericellopsis maritima BC17 and their cytotoxic and antimicrobial activities. Mar. Drugs, 21, 2023, 634, 10.3390/md21120634.
Rabaneda, L.G., Carrasco, M., López-Toledano, M.A., Murillo-Carretero, M., Ruiz, F.A., Estrada, C., Castro, C., Homocysteine inhibits proliferation of neuronal precursors in the mouse adult brain by impairing the basic fibroblast growth factor signaling cascade and reducing extracellular regulated kinase 1/2-dependent cyclin E expression. FASEB J. 22 (2008), 3823–3835, 10.1096/fj.08-109306.
Curtis, M.J., Abernethy, D.R., Revision of instructions to authors for pharmacology research and perspectives: Enhancing the quality and transparency of published work. Pharmacol. Res. Perspect., 3, 2015, e00106.
Carrasco, M., Rabaneda, L.G., Murillo-Carretero, M., Ortega-Martínez, S., Martínez-Chantar, M.L., Woodhoo, A., Luka, Z., Wagner, C., Lu, S.C., Mato, J.M., Micó, J.A., Castro, C., Glycine N-methyltransferase expression in the hippocampus and its role in neurogenesis and cognitive performance. Hippocampus 24 (2014), 840–852, 10.1002/hipo.22274.
Jo, S., Kim, T., Iyer, V.G., Im, W., CHARMM-GUI: a web-based graphical user interface for CHARMM. J. Comput. Chem 29:11 (2008), 1859–1865, 10.1002/jcc.20945.
Best, R.B., Zhu, X., Shim, J., Lopes, P.E.M., Mittai, J., Feig, M., Mackerell, A.D. Jr., Optimization of the additive CHARMM all-atom protein force field targeting improved sampling of the backbone φ, ψ and side-chain χ(1) and χ(2) dihedral angles. J. Chem Theory Comput. 8:9 (2012), 3257–3273, 10.1021/ct300400x.
Vanommeslaeghe, K., MacKerell, A.D. Jr., Automation of the CHARMM General Force Field (CGenFF) I: Bond Perception and Atom Typing. J. Chem. Inf. Model 52 (2012), 3144–3154, 10.1021/ci300363c.
Bertram, R., Complementation plasmids, inducible gene-expression systems, and reporters for staphylococci. Methods Mol. Biol. 1373 (2016), 25–32, 10.1007/7651_2014_181.