[en] Recessive dystrophic epidermolysis bullosa (RDEB) is a rare and most often severe genodermatosis characterized by recurrent blistering and erosions of the skin and mucous membranes after minor trauma, leading to major local and systemic complications. RDEB is caused by loss-of-function mutations in COL7A1 encoding type VII collagen (C7), the main component of anchoring fibrils which form attachment structures stabilizing the cutaneous basement membrane zone. Most of the previously reported COL7A1 mutations are located in the coding or intronic regions. We describe 6 patients with localized or intermediate RDEB for whom one recessive pathogenic variant in the coding region and a second variant in the COL7A1 promoter were identified. These substitutions, three of which are novel, are localized in two Sp1 binding sites of the promoter region. DNA pull-down assay showed a drastic reduction of Sp1 binding consistent with a dramatic decrease in COL7A1 transcript and almost undetectable C7 protein levels. Our results reveal that mutations in the COL7A1 promoter on the background of a null allele can underlie localized or intermediate RDEB. They further emphasize the functional importance of Sp1 motifs in the proximal COL7A1 promoter which should be carefully investigated for regulatory mutations in the case of RDEB with only one pathogenic variant identified in the coding or intronic regions.
Disciplines :
Dermatology
Author, co-author :
Pironon, Nathalie ; Laboratory of Genetic Skin Diseases, Institut Imagine, Université Paris Cité, Inserm, UMR 1163, F-75015, Paris, France
Gasparyan, Artyom; Center of Medical Genetics and Primary Health Care, Abovyan Street, Yerevan, Armenia
Yubero, María Joao; Facultad de Medicina, Clínica Alemana Universidad del Desarrollo, Santiago, Chile ; DEBRA Chile, Francisco de Villagra 392, Ñuñoa, Santiago, Chile
Duchatelet, Sabine; Laboratory of Genetic Skin Diseases, Institut Imagine, Université Paris Cité, Inserm, UMR 1163, F-75015, Paris, France
Hovhannesyan, Kristine ; Université de Liège - ULiège > Département des sciences cliniques > Neuropédiatrie ; Center of Medical Genetics and Primary Health Care, Abovyan Street, Yerevan, Armenia
Leclerc-Mercier, Stephanie; Department of Pathology, AP-HP, Hôpital Necker-Enfants Malades, F-75015, Paris, France
Kostandyan, Natella; Center of Medical Genetics and Primary Health Care, Abovyan Street, Yerevan, Armenia
Palisson, Francis; Facultad de Medicina, Clínica Alemana Universidad del Desarrollo, Santiago, Chile ; DEBRA Chile, Francisco de Villagra 392, Ñuñoa, Santiago, Chile
Sarkisian, Tamara; Center of Medical Genetics and Primary Health Care, Abovyan Street, Yerevan, Armenia
Titeux, Matthias ; Laboratory of Genetic Skin Diseases, Institut Imagine, Université Paris Cité, Inserm, UMR 1163, F-75015, Paris, France
Fuentes, Ignacia ; DEBRA Chile, Francisco de Villagra 392, Ñuñoa, Santiago, Chile. Ignacia.fuentesbustos@gmail.com ; Centro de Genética y Genómica, Facultad de Medicina, Clínica Alemana Universidad del Desarrollo, Santiago, Chile. Ignacia.fuentesbustos@gmail.com ; Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile. Ignacia.fuentesbustos@gmail.com
Hovnanian, Alain ; Laboratory of Genetic Skin Diseases, Institut Imagine, Université Paris Cité, Inserm, UMR 1163, F-75015, Paris, France. alain.hovnanian@inserm.fr ; Department of Genomic Medicine of Rare Diseases, AP-HP, Hôpital Necker-Enfants Malades, F-75015, Paris, France. alain.hovnanian@inserm.fr
Language :
English
Title :
Novel variants impairing Sp1 transcription factor binding in the COL7A1 promoter cause mild cases of recessive dystrophic epidermolysis bullosa.
We are grateful to Debra France and Debra Chile for their support. This work was partially supported by FONDECYT Regular grant [1220704] to Ignacia Fuentes.
C. Has J.W. Bauer C. Bodemer M.C. Bolling L. Bruckner‐Tuderman A. Diem et al. Consensus reclassification of inherited epidermolysis bullosa and other disorders with skin fragility Br J Dermatol 183 614 27 1:STN:280:DC%2BB38%2FotVWlsg%3D%3D 10.1111/bjd.18921 32017015
R. Gardella S. Barlati N. Zoppi G. Tadini M. Colombi A -96C>T mutation in the promoter of the collagen type VII gene (COL7A1) abolishing transcription in a patient affected by recessive dystrophic epidermolysis bullosa Hum Mutat 16 275 1:STN:280:DC%2BD3M%2Fht1KmsA%3D%3D 10.1002/1098-1004(200009)16:3<275::AID-HUMU22>3.0.CO;2-9 10980546
Gardella R, Belletti L, Barlati S, Colombi M. Identification of two splicing mutations in the collagen type VII gene (COL7A1) of a patient affected by the localisata variant of recessive dystrophic epidermolysis bullosa. Am J Hum Genet. 1996;59:292–300.
R. Gardella N. Zoppi S. Ferraboli D. Marini G. Tadini S. Barlati et al. Three homozygous PTC mutations in the collagen type VII gene of patients affected by recessive dystrophic epidermolysis bullosa: analysis of transcript levels in dermal fibroblasts Hum Mutat 13 439 52 1:CAS:528:DyaK1MXktVKlsbk%3D 10.1002/(SICI)1098-1004(1999)13:6<439::AID-HUMU3>3.0.CO;2-N 10408773
M. Ritelli N. Chiarelli S. Quinzani C. Dordoni M. Venturini P. Calzavara-Pinton et al. Compound heterozygosity of the novel −186C>T mutation in the COL7A1 promoter and the recurrent c.497insA mutation leads to generalized dystrophic epidermolysis bullosa: correspondence Br J Dermatol 168 904 6 1:CAS:528:DC%2BC3sXks1Gjsbk%3D 10.1111/bjd.12063 23013315
N. Almaani L. Liu P. Dopping-Hepenstal J. Lai-Cheong A. Wong A. Nanda et al. Identical glycine substitution mutations in type VII collagen may underlie both dominant and recessive forms of dystrophic epidermolysis bullosa Acta Derm Venereol 91 262 6 10.2340/00015555-1053 21448560
H. Vahidnezhad L. Youssefian A.H. Saeidian A. Touati S. Sotoudeh M. Abiri et al. Multigene next-generation sequencing panel identifies pathogenic variants in patients with unknown subtype of epidermolysis bullosa: subclassification with prognostic implications J Invest Dermatol 137 2649 52 1:CAS:528:DC%2BC2sXhslagu7%2FL 10.1016/j.jid.2017.07.830 28830826
N.V. Whittock G.H.S. Ashton R. Mohammedi J.E. Mellerio C.G. Mathew S.J. Abbs et al. Comparative mutation detection screening of the type VII collagen gene (COL7A1) using the protein truncation test, fluorescent chemical cleavage of mismatch, and conformation sensitive gel electrophoresis J Invest Dermatol 113 673 86 1:CAS:528:DyaK1MXmslamtLc%3D 10.1046/j.1523-1747.1999.00732.x 10504458
N. Cuadrado-Corrales C. Sánchez-Jimeno M. García M.-J. Escámez N. Illera Á. Hernández-Martín et al. A prevalent mutation with founder effect in Spanish recessive dystrophic epidermolysis bullosa families BMC Med Genet 11 1:CAS:528:DC%2BC3cXht1GntL3E 10.1186/1471-2350-11-139 20920254 2957067 139
M.J. Escámez M. García N. Cuadrado-Corrales S.G. Llames A. Charlesworth N. De Luca et al. The first COL7A1 mutation survey in a large Spanish dystrophic epidermolysis bullosa cohort: c.6527insC disclosed as an unusually recurrent mutation: Highly recurrent COL7A1 mutation in Spanish DEB patients Br J Dermatol 163 155 61 1:CAS:528:DC%2BC3cXhtVGitb7I 10.1111/j.1365-2133.2010.09713.x 20184583
Hovnanian A, Rochat A, Bodemer C, Petit E, Rivers CA, Prost C, et al. Characterization of 18 new mutations in COL7A1 in recessive dystrophic epidermolysis bullosa provides evidence for distinct molecular mechanisms underlying defective anchoring fibril formation. Am J Hum Genet. 1997;61:599–610.
J.S. Kern J. Kohlhase L. Bruckner-Tuderman C. Has Expanding the COL7A1 mutation database: novel and recurrent mutations and unusual genotype – phenotype constellations in 41 patients with dystrophic epidermolysis bullosa J Invest Dermatol 126 1006 12 1:CAS:528:DC%2BD28XjsFSqs7k%3D 10.1038/sj.jid.5700219 16484981
N. Knöpfel L. Noguera-Morel A. Hernández-Martin A. García-Martin M. García Á. Mencía et al. Identical COL71A1 heterozygous mutations resulting in different dystrophic epidermolysis bullosa phenotypes Pediatr Dermatol 35 e94 8 10.1111/pde.13367 29272047
U.-M. Koivisto J.J. Palvimo O.A. Janne K. Kontula A single-base substitution in the proximal Spl site of the human low density lipoprotein receptor promoter as a cause of heterozygous familial hypercholesterolemia Proc Natl Acad Sci USA 91 10526 30. 1:CAS:528:DyaK2cXmslyit7k%3D 10.1073/pnas.91.22.10526 7937987 45054
J. Feng X. Wu Y. Zhang X. Yang G. Ma S. Chen et al. A novel mutation (−195C>A) in the promoter region of CFTR gene is associated with Chinese congenital bilateral absence of vas deferens (CBAVD) Gene 719 144007 1:CAS:528:DC%2BC1MXhs12it7nF 10.1016/j.gene.2019.144007 31357024
M.R. Dusing D.A. Wiginton Sp1 is essential for both enhancer-mediated and basal activation of the TATA-less human adenosine deaminase promoter Nucleic Acids Res 22 669 77 1:CAS:528:DyaK2cXjtFOitrc%3D 10.1093/nar/22.4.669 8127716 307859
L. Vindevoghel K.-Y. Chung A. Davis D. Kouba S. Kivirikko H. Alder et al. A GT-rich sequence binding the transcription factor Sp1 is crucial for high expression of the human type VII collagen gene (COL7A1) in fibroblasts and keratinocytes J Biol Chem 272 10196 204 1:CAS:528:DyaK2sXisFOmtb4%3D 10.1074/jbc.272.15.10196 9092567
H. Sasaki A. Kon H. Takeda D. Sawamura I. Kakizaki K. Takagaki et al. A novel Sp1-family-related cis-acting element for transcription of type VII collagen gene (COL7A1) J Dermatol Sci 32 239 42 1:CAS:528:DC%2BD3sXnsVymsb4%3D 10.1016/S0923-1811(03)00133-6 14507451
T. Odorisio M. Di Salvio A. Orecchia G. Di Zenzo E. Piccinni F. Cianfarani et al. Monozygotic twins discordant for recessive dystrophic epidermolysis bullosa phenotype highlight the role of TGF-β signalling in modifying disease severity Hum Mol Genet 23 3907 22 1:CAS:528:DC%2BC2cXhtFeitb3I 10.1093/hmg/ddu102 24599399
A. Kon L. Vindevoghel D.J. Kouba Y. Fujimura J. Uitto A. Mauviel Cooperation between SMAD and NF-kB in growth factor regulated type VII collagen gene expression Oncogene 18 1837 44 10.1038/sj.onc.1202495
M. Naso J. Uitto J.F. Klement Transcriptional control of the mouse Col7a1 gene in keratinocytes: basal and transforming growth factor-β regulated expression J Invest Dermatol 121 1469 78 1:CAS:528:DC%2BD2cXhtVarsQ%3D%3D 10.1111/j.1523-1747.2003.12640.x 14675198