Britt-Ugartemendia, K., Stevens, K., Al Rwahnih, M., Levy, A., and Batuman, O. 2025. RNA-sequencing-based virome discovery in Florida citrus pests. Phytobiomes J. 9:95-108.
D’Amico-Willman, K. M., Joglekar, P., Ritchie, D. F., Smith, A. M., Heiberger, H., and Huerta, A. I. 2025. Genetically similar Xanthomonas arboricola pv. pruni strains and associated phages display phenotypic and genotypic variation across 35 years. Phytobiomes J. 9:123-138.
Feng, Y., Krueger, E. N., Liu, S., Dorman, K., Bonning, B. C., and Miller, W. A. 2017. Discovery of known and novel viral genomes in soybean aphid by deep sequencing. Phytobiomes J. 1:36-45.
Fontdevila Pareta, N., Gailly, C., Blouin, A. G., Buchmann, B., Bünter, M., Candresse, T., Dubuis, N., Kutnjak, D., Lateur, M., Pecman, A., Steyer, S., and Massart, S. 2025. Virome scanning of pear germplasm collections identifies a new velarivirus and extends the geographical spread of three other pear viruses. Phytobiomes J. 9:68-79.
Fouad, N. M. I., Barro, M., Bangratz, M., Sérémé, D., Filloux, D., Fernandez, E., Julian, C., Saïbou, N., Kassankogno, A. I., Guigma, A. K., Roumagnac, P., Wonni, I., Tollenaere, C., and Poulicard, N. 2025. Old foe, new host: Epidemiology, genetic diversity, and pathogenic characterization of maize streak virus in rice fields from Burkina Faso. Phytobiomes J. 9:32-44.
Gaši, E., Radić, T., Gambino, G., Čarija, M., Matić, F., Balestrini, R., and Hančević, K. 2025. Arbuscular mycorrhizal fungi modify temporal virus accumulation and distribution in different grapevine tissues. Phytobiomes J. 9:139-148.
Hackenberg, L., Han, J., MacWilliams, J., Kapuscinski, M., Stenglein, M., Fletcher, R., and Nachappa, P. 2025. Exploring the hemp virome and assessing hemp germplasm for resistance to an emerging pathogen. Phytobiomes J. 9:45-53.
Hoyle, V., Headrick, H., Cooper, W. R., Fendell-Hummel, H. G., Cooper, M. L., Flasco, M., Cieniewicz, E., Heck, M., and Fuchs, M. 2025. Ecological connectivity of plant communities for red blotch disease dynamics revealed by the dietary profiles and landscape-level movement of Spissistilus festinus. Phytobiomes J. 9:21-31.
Liakos, C., Ibanez, V., Lebre, P. H., Derie, M. L., van der Waals, J., du Toit, L., Dutta, B., Kvitko, B., Cowan, D. A., and Coutinho, T. A. 2025. The bacterial and viral communities associated with onion bacterial bulb rot. Phytobiomes J. 9:109-122.
Roossinck, M. J. 2003. Plant RNA virus evolution. Curr. Opin. Microbiol. 6:406-409.
Schnabel, E., Xavier, C., Whitfield, A. E., Dubrow, Z., Pham, G., and Cieniewicz, E. 2025. Exploring the virome of blackberry and wild Rubus spp. in South Carolina. Phytobiomes J. 9:80-94.
Schönegger, D., Marais, A., Garcia Arenal, F., Malmstrom, C. M., Martinez Jimenez, M., McLeish, M., Lefebvre, M., Faure, C., Svanella-Dumas, L., and Candresse, T. 2025. Sympatric populations of crop and wild carrots (Daucus carota subsp.) have distinct viromes, with shared core species more prevalent in farm-grown populations. Phytobiomes J. 9:8-20.
West-Ortiz, M., Olmedo-Velarde, A., Stuehler, D., Jr., Pollock, E., Alvarez-Quinto, R., Wilson, J. R., Preising, S., Larrea-Sarmiento, A., Alabi, O. J., Fuchs, M., and Heck, M. 2025. Cotton plants presenting symptoms associated with cotton leafroll dwarf virus revealed a novel caulimovirid, cotton virus A, with endogenous caulimovirids in its hosts. Phytobiomes J. 9:54-67.
Wolf, Y. I., Kazlauskas, D., Iranzo, J., Lucía-Sanz, A., Kuhn, J. H., Krupovic, M., Dolja, V. V., and Koonin, E. V. 2018. Origins and evolution of the global RNA virome. mBio 9:10.1128/mbio.02329-18.
