Biological systems; modeling; neuroscience; Biophysical parameters; Dynamical networks; Homeostatic regulations; Molecular components; Neurological disease; Regulatory network; Robustness properties; Theoretical approach; Control and Systems Engineering; Control and Optimization
Abstract :
[en] Neuronal systems exhibit highly stable and tunable behaviors in spite of huge variability at the molecular component level and in spite of persistent physiological and pathological perturbations. How is this robust flexibility achieved? Homeostatic integral control has been shown to be key in reconciling variability with stability, but the explanatory model used lacks basic robustness properties to perturbations. We suggest that positive molecular regulatory networks may play a major role in reconciling stability, variability and robustness. The idea we propose is that integral control happens along the dominant direction of the network. This slow direction generates a strongly attractive, and thus robust, subspace along which almost perfect homeostatic regulation can be achieved. Fluctuations of relevant molecular variables along this positive dominant subspace explain how big, positively-correlated variations of biophysical parameters (as measured in experiments) are compatible with robust regulation, thus explaining flexibility. Because of robustness, the properties of the positive network can be subject to slower tuning processes (like the circadian rhythm), which provides a biologically plausible basis for tunable variability to be compatible with robust regulation. The relevance of the proposed regulation model for control-theoretical approaches to neurological diseases is also discussed.
Disciplines :
Engineering, computing & technology: Multidisciplinary, general & others
Author, co-author :
Franci, Alessio ; Université de Liège - ULiège > Département d'électricité, électronique et informatique (Institut Montefiore) > Brain-Inspired Computing ; Department of Mathematics, National Autonomous University of Mexico, Ciudad Universitaria, Mexico City, Mexico
O'Leary, Timothy; Department of Engineering, University of Cambridge, Cambridge, United Kingdom
Golowasch, Jorge; Federated Department of Biological Sciences, New Jersey Institute of Technology, Rutgers University-Newark, Newark, United States
Language :
English
Title :
Positive Dynamical Networks in Neuronal Regulation: How Tunable Variability Coexists with Robustness
Publication date :
October 2020
Journal title :
IEEE Control Systems Letters
eISSN :
2475-1456
Publisher :
Institute of Electrical and Electronics Engineers Inc.
UNAM - National Autonomous University of Mexico CONACYT - Consejo Nacional de Ciencia y Tecnología NSF - National Science Foundation
Funding text :
Manuscript received March 3, 2020; revised May 5, 2020; accepted May 19, 2020. Date of publication May 25, 2020; date of current version June 9, 2020. This work was supported in part by UNAM-DGAPA-PAPIIT under Grant IN102420, in part by CONACyT under Grant A1-S-10610, and in part by U.S. National Science Foundation under Grant DMS1715808. Recommended by Senior Editor M. Arcak. (Corresponding author: Alessio Franci.) Alessio Franci is with the Department of Mathematics, National Autonomous University of Mexico, Ciudad Universitaria, Mexico City 04510, Mexico (e-mail: afranci@ciencias.unam.mx).
D. Angeli and E. D. Sontag, "Monotone control systems," IEEE Trans. Autom. Control, vol. 48, no. 10, pp. 1684-1698, Oct. 2003.
C. Briat, A Gupta, and M. Khammash, "Antithetic integral feedback ensures robust perfect adaptation in noisy biomolecular networks," Cell Syst., vol. 2, no. 1, pp. 15-26, 2016.
G. Drion, A. Franci, J. Dethier, and R. Sepulchre, "Dynamic input conductances shape neuronal spiking," ENEURO, vol. 2, no. 1, pp. 0031-0114 2015.
N. Fenichel, "Geometric singular perturbation theory for ordinary differential equations," J. Differ. Equ., vol. 31, no. 1, pp. 53-98, 1979.
S. Finkbeiner and M. E. Greenberg, "Ca2+ channel-regulated neuronal gene expression," J. Neurobiol., vol. 37, no 1, pp. 171-189, 1998.
A. Franci, G. Drion, V. Seutin, and R. Sepulchre, "A balance equation determines a switch in neuronal excitability," PLoS Comput. Biol., vol. 9, no. 5, 2013, Art. no. e1003040.
G. Giordano and C. Altafini, "Interaction sign patterns in biological networks: From qualitative to quantitative criteria," in Proc. IEEE 56th Annu. Conf. Decis. Control, Melbourne, VIC, Australia, 2017, pp. 5348-5353.
M. S. Goldman, J. Golowasch, E. Marder, and L. F. Abbott, "Global structure, robustness, and modulation of neuronal models," J. Neurosci., vol. 21, no. 14, pp. 5229-5238, 2001.
J. Golowasch, "Neuromodulation of central pattern generators and its role in the functional recovery of central pattern generator activity," J. Neurophysiol., vol. 122, no. 1, pp. 300-315, 2019.
Z. Liu, J. Golowasch, E. Marder, and L. F. Abbott, "A model neuron with activity-dependent conductances regulated by multiple calcium sensors," J. Neurosci., vol. 18, no. 7, pp. 2309-2320, 1998.
E. Marder and J-M. Goaillard, "Variability, compensation and homeostasis in neuron and network function," Nat. Rev. Neurosci., vol. 7, no. 7, pp. 563-574, 2006.
E. Marder, T. O'Leary, and S. Shruti, "Neuromodulation of circuits with variable parameters: Single neurons and small circuits reveal principles of state-dependent and robust neuromodulation," Annu. Rev. Neurosci., vol. 37, pp. 329-347, Jan. 2014.
D. A. McCormick and T. Bal, "Sleep and arousal: Thalamocortical mechanisms," Annu. Rev. Neurosci., vol. 20, no. 1, pp. 185-215, 1997.
J. S. Menet, J. Rodriguez, K. C. Abruzzi, and M. Rosbash, "Nascentseq reveals novel features of mouse circadian transcriptional regulation," eLife, vol. 1, Nov. 2012, Art. no. e00011.
T. Nagai, W. Shan, and K. Yamada, "Exploring molecular targets for epilepsy treatment from the perspective of neuronal homeostasis," J. Pharm. Soc. Jpn., vol. 139, no. 6, pp. 923-929, 2019.
D. Noutsos, "On Perron-Frobenius property of matrices having some negative entries," Linear Algebra Appl., vol. 412, nos. 2-3, pp. 132-153, 2006.
T. O'Leary, A. H. Williams, A. Franci, and E. Marder, "Cell types, network homeostasis, and pathological compensation from a biologically plausible ion channel expression model," Neuron, vol. 82, no. 4, pp. 809-821, 2014.
T. O'Leary and D. J. A. Wyllie, "Neuronal homeostasis: Time for a change?" J. Physiol., vol. 589, no. 20, pp. 4811-4826, 2011.
D. J. Schulz, J.-M. Goaillard, and E. Marder, "Quantitative expression profiling of identified neurons reveals cell-specific constraints on highly variable levels of gene expression," Proc. Nat. Acad. Sci., vol. 104, no. 32, pp. 13187-13191, 2007.
B. Styr et al., "Mitochondrial regulation of the hippocampal firing rate set point and seizure susceptibility," Neuron, vol. 102, no. 5, pp. 1009-1024, 2019.
T. Tran et al., "Ionic current correlations are ubiquitous across phyla," Sci. Rep., vol. 9, no. 1, pp. 1-9, 2019.
C. T. Unal, J. Golowasch, and L. Zaborszky, "Adult mouse basal forebrain harbors two distinct cholinergic populations defined by their electrophysiology," Front. Behav. Neurosci., vol. 6, pp. 6-21, May 2012.