Transcriptional regulation of ZIP genes is independent of local zinc status in Brachypodium shoots upon zinc deficiency and resupply.

Amini, Sahand; Arsova, Borjana; Gobert, Sylvie; Carnol, Monique; Bosman, Bernard; Motte, Patrick; Watt, Michelle; Hanikenne, Marc

doi:10.1111/pce.14151

Article (Scientific journals)

Transcriptional regulation of ZIP genes is independent of local zinc status in Brachypodium shoots upon zinc deficiency and resupply.

Amini, Sahand; Arsova, Borjana; Gobert, Sylvie et al.

2021 • In Plant, cell & environment, 44, p. 3376-3397

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https://hdl.handle.net/2268/263018

DOI
10.1111/pce.14151

PubMed
34263935

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Keywords :

Brachypodium; deficiency; dynamics; excess; resupply; signalling; zinc; zinc flux

Abstract :

[en] The biological processes underlying zinc homeostasis are targets for genetic improvement of crops to counter human malnutrition. Detailed phenotyping, ionomic, RNA-Seq analyses and flux measurements with (67) Zn isotope revealed whole-plant molecular events underlying zinc homeostasis upon varying zinc supply and during zinc resupply to starved Brachypodium distachyon (Brachypodium) plants. Although both zinc deficiency and excess hindered Brachypodium growth, accumulation of biomass and micronutrients into roots and shoots differed depending on zinc supply. The zinc resupply dynamics involved 1,893 zinc-responsive genes. Multiple zinc-regulated transporter and iron-regulated transporter (IRT)-like protein (ZIP) transporter genes and dozens of other genes were rapidly and transiently down-regulated in early stages of zinc resupply, suggesting a transient zinc shock, sensed locally in roots. Notably, genes with identical regulation were observed in shoots without zinc accumulation, pointing to root-to-shoot signals mediating whole-plant responses to zinc resupply. Molecular events uncovered in the grass model Brachypodium are useful for the improvement of staple monocots.

Disciplines :

Phytobiology (plant sciences, forestry, mycology...)

Author, co-author :

Amini, Sahand

Arsova, Borjana

Gobert, Sylvie ; Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Océanographie biologique

Carnol, Monique ; Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Ecologie végétale et microbienne

Bosman, Bernard ; Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Ecologie végétale et microbienne

Motte, Patrick ; Université de Liège - ULiège > Département des sciences de la vie > Génomique fonctionnelle et imagerie moléculaire végétale

Watt, Michelle

Hanikenne, Marc ; Université de Liège - ULiège > Département des sciences de la vie > Biologie végétale translationnelle

Language :

English

Title :

Transcriptional regulation of ZIP genes is independent of local zinc status in Brachypodium shoots upon zinc deficiency and resupply.

Publication date :

2021

Journal title :

Plant, cell & environment

ISSN :

0140-7791

eISSN :

1365-3040

Volume :

Pages :

3376-3397

Peer reviewed :

Peer reviewed

Commentary :

Available on ORBi :

since 05 September 2021

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