Vanderpoorten, Alain ; Université de Liège - ULiège > Département des sciences et gestion de l'environnement > Taxonomie végétale et biologie de la conservation
Language :
English
Title :
When morphology and molecules tell us different stories: a case-in-point with Leptodon corsicus, a new and unique endemic moss species from Corsica
Beldade P, Koops K, Brakefield PM. 2002. Developmental constraints versus flexibility in morphological evolution. Nature 416: 844-847.
Brakefield PM. 2006. Evo-devo and constraints on selection. Trends in Ecology and Evolution 21: 362-368.
Cubero JI, Marcos Samaniego N, Enroth J. 2006. Pseudoparaphyllia in European and Macaronesian species of Neckera Hedw. (Neckeraceae, Musci). Cryptogamie, Bryologie 27: 333-342.
Enroth J. 1992. Corrections to Cryptoleptodon, Forsstroemia and Leptodon (Leptodontaceae, Musci). Journal of the Hattori Botanical Laboratory 71: 75-82.
Enroth J. 1994. On the evolution and circumscription of the Neckeraceae (Musci). Journal of the Hattori Botanical Laboratory 76: 13-20.
Frahm J.-P, Sabovljevic M, Nokhbehsaim M. 2008. New data on the taxonomic status of Ditrichum plumbicola Crundw. (Bryophyta) and its relation to D. lineare (sw.) Kindb. based on the trnL-F region of the cpDNA. International Journal of Botany 4: 120-123.
Funk DJ, Omland KE. 2003. Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA. Annual Reviews in Ecology and Evolution 34: 397-423.
Gonzalez-Mancebo JM, Romaguera F, Ros RM, Patiño J, Werner O. 2008. Bryophyte flora of the Canary Islands: an updated compilation of the species list with an analysis of distribution patterns in the context of the Macaronesian Region. Cryptogamie Bryologie 29: 315-357.
Gradstein SR, Weber WA. 1982. Bryogeography of the Galapagos Islands. Journal of the Hattori Botanical Laboratory 52: 127-152.
Hedderson TA, Nowell TL. 2006. Phylogeography of Homalothecium sericeum (Hedw.) Br. Eur.; toward a reconstruction of glacial survival and postglacial migration. Journal of Bryology 28: 283- 292.
Hedenäs L, Eldenäs P. 2008. Relationships in Scorpidium (Calliergonaceae, Bryophyta), especially between S. cossonii and S. scorpioides. Taxon 57: 121-130.
Hoekstra HE, Hirschmann RJ, Bundey RA, Insel PA, Crossland JP. 2006. A single amino acid mutation contributes to adaptive beach mouse color pattern. Science 313: 101-104.
Huttunen S, Hedenäs L, Ignatov MS, Devos N, Vanderpoorten A. 2008. Origin and evolution of the northern hemisphere disjunction in the moss genus Homalothecium (Brachytheciaceae). American Journal of Botany 95: 720-730.
Kelchner SA. 2000. The evolution of non-coding chloroplast DNA and its application in plant systematics. Annals of the Missouri Botanical Garden 87: 482-498.
Lee MSY. 2001. Uninformative characters and apparent conflict between molecules and morphology. Molecular Biology and Evolution 18: 676-680.
Maddison WP, Maddison DR. 2009. Mesquite: a modular system for evolutionary analysis. Version 2.6. http://mesquiteproject.org.
McDaniel SF. 2005. Genetic correlations do not constrain the evolution of sexual dimorphism in the moss. Ceratodon purpureus. Evolution 59: 2353-2361.
Müller J, Müller K. 2004. TreeGraph: automated drawing of complex tree figures using an extensible tree description format. Molecular Ecology Notes 4: 786-788.
Müller KF. 2005. SeqState - primer design and sequence statistics for phylogenetic DNA data sets. Applied Bioinformatics 4: 65-69.
Müller K, Quandt D, Müller J, Neinhuis C. 2005. PhyDEH 0.995: Phylogenetic Data Editor. www.phyde.de.
Nixon KC. 1999. The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics 15: 407-414.
Olsson S, Buchbender V, Huttunen S, Enroth J, Hedenäs L, Quandt D. 2009a. Evolution of the Neckeraceae (Bryophyta): resolving the backbone phylogeny and identifying ancestral character states. Systematics and Biodiversity 7.
Olsson S, Buchbender V, Enroth J, Hedenäs L, Huttunen S, Quandt D. 2009b. Phylogenetic analyses reveal high levels of polyphyly among pleurocarpous lineages as well as novel clades. Bryologist 112: in press.
Olsson S, Buchbender V, Enroth J, Hedenäs L, Huttunen S, Quandt D. 2009c. Phylogenetic relationships in the 'Pinnatella' clade of the moss family Neckeraceae (Bryophyta). Organisms Diversity & Evolution 9: in press.
Olsson S, Rumsey F, Grundmann M, Russel S, Enroth J, Quandt D. 2009d. Convergent evolution of British and Macaronesian endemic Thamnobryums (Neckeraceae). Journal of Bryology 31: 1-10.
Quandt D, Stech M. 2004. Molecular Evolution of the trnTUGUtrnFGAA region in Bryophytes. Plant Biology 6: 545-554.
Quandt D, Müller K, Huttunen S. 2003. Characterisation of the chloroplast DNA psbT-H region and the influence of dyad symmetrical elements on phylogenetic reconstructions. Plant Biology 5: 400-410.
Quandt D, Müller K, Stech M, Frahm J.-P, Frey W, Hilu KW, Borsch T. 2004. Molecular evolution of the chloroplast trnL-F region in land plants. Monographs in Sytematic Botany 98: 13-37.
Rowley GD. 2007. Cytotypes: a case for infraspecific names. Taxon 56: 983.
Sakai AK, Wagner WL, Mehroff LA. 2002. Patterns of endangerment in the Hawaiian flora. Systematic Biology 51: 276-302.
Shaw AJ. 2009. Bryophyte species and speciation. In: Goffinet B, Shaw J, eds. Bryophyte biology, 2nd edn. Cambridge: Cambridge University Press, pp. 445-485.
Shaw AJ, Allen B. 2000. Phylogenetic relationships, morphological incongruence, and geographic speciation in the Fontinalaceae (Bryophyta). Molecular Phylogenetics and Evolution 16: 225-237.
Simmons MP, Ochoterena H. 2000. Gaps as characters in sequencebased phylogenetic analyses. Systematic Biology 49: 369-381.
Sotiaux A, Pioli A, Royaud A, Schumacker R, Vanderpoorten A. 2007. A check-list of the bryophytes of Corsica (France): new records and a review of the literature. Journal of Bryology 29: 41-53.
Staples GW, Imada CT. 2006. Checklist of Hawaiian anthocerotes and hepatics. Tropical Bryology 28: 15-47.
Staples GW, Imada CT, Hoe WJ, Smith CW. 2004. A revised checklist of Hawaiian mosses. Tropical Bryology 25: 35-69.
Stech M, Frahm J.-P. 1999. The status of Platyhypnidium mutatum Ochyra & Vanderpoorten and the systematic value of the Donrichardsiaceae based on molecular data. Journal of Bryology 21: 191-195.
Stenoien HK. 2008. Slow molecular evolution in 18S rDNA, rbcL and nad5 genes of mosses compared with higher plants. Journal of Evolutionary Biology 21: 566-571.
Swofford DL. 2002. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland, MA.
Vanderpoorten A, Goffinet B. 2006. Mapping uncertainty and phylogenetic uncertainty in ancestral character state reconstruction: an example in the moss genus Brachytheciastrum. Systematic Biology 55: 957-971.
Vanderpoorten A, Jacquemart AL. 2004. Evolutionary mode, tempo, and phylogenetic association of continuous morphological traits in the aquatic moss genus Amblystegium. Journal of Evolutionary Biology 17: 279-287.
Vanderpoorten A, Long DG. 2006. Budding speciation and neotropical origin of the Azorean endemic liverwort, Leptoscyphus azoricus. Molecular Phylogenetics and Evolution 40: 73-83.
Vanderpoorten A, Hedenäs L, Cox CJ, Shaw AJ. 2002. Phylogeny and morphological evolution of the Amblystegiaceae (Bryopsida). Molecular Phylogenetics and Evolution 23: 1-21.
Wall PK, Leebens-Mack J, Müller KF, Field D, Altman NS, dePamphilis CW, 2008. PlantTribes: a gene and gene family resource for comparative genomics in plants. Nucleic Acids Research 36: D970-D976.
Werner O, Patiño J, González-Mancebo JM, Ros RM. 2007. The taxonomic status of Platyhypnidium torrenticola based on ITS sequence data. Cryptogamie, Bryologie 28: 187-195.
zander RH, Vitt DH. 1979. Gametophytic distinctions of Zygodon (Orthotrichaceae), Anoectangium and Leptodontium (Pottiaceae) and the status of Anoectangium rubrigemmium of Hawaii. Canadian Journal of Botany 57: 292-296.