Momenimovahed, Z., Tiznobaik, A., Taheri, S., Salehiniya, H.: Ovarian cancer in the world: epidemiology and risk factors. Int. J. Women’s health 11, 287–299 (2019)
Shen, R., Mo, Q., Schultz, N., Seshan, V.E., Olshen, A.B., Huse, J., et al.: Integrative subtype discovery in glioblastoma using iCluster. PLoS ONE 7(4), e35236 (2012)
Chaudhary, K., Poirion, O.B., Lu, L., Garmire, L.X.: Deep learning–based multi-omics integration robustly predicts survival in liver cancer. Clin. Cancer Res. 24(6), 1248–1259 (2008)
Rappoport, N., Shamir, R.: Multi-omic and multi-view clustering algorithms: review and cancer benchmark. Nucleic Acids Res. 46(20), 10546–10562 (2018)
Simidjievski, N., Bodnar, C., Tariq, I., Scherer, P., Terre, H.A., Shams, Z., et al.: Variational autoencoders for cancer data integration: design principles and computational practice. Front. Genet. 10, 1205 (2019)
Kim, D., Joung, J.-G., Sohn, K.-A., Shin, H., Park, Y.R., Ritchie, M.D., et al.: Knowledge boosting: a graph-based integration approach with multi-omics data and genomic knowledge for cancer clinical outcome prediction. J. Am. Med. Inform. Assoc. 22(1), 109–120 (2014)
Wan, Y.W., Allen, G.I., Liu, Z.: TCGA2STAT: simple TCGA data access for integrated statistical analysis in R. Bioinformatics 32(6), 952–954 (2016)
Xu, A., Chen, J., Peng, H., Han, G., Cai, H.: Simultaneous interrogation of cancer omics to identify subtypes with significant clinical differences. Front. Genetics 10, 236 (2019)
Kim, S.Y., Jeong, H.H., Kim, J., Moon, J.H., Sohn, K.A.: Robust pathway-based multi-omics data integration using directed random walks for survival prediction in multiple cancer studies. Biol. Dir. 14(1), 8 (2019)
Liberzon, A., Subramanian, A., Pinchback, R., Thorvaldsdóttir, H., Tamayo, P., Mesirov, J.P.: Molecular signatures database (MSigDB) 3.0. Bioinformatics 27(12), 1739–1740 (2011)
Papp, E., Hallberg, D., Konecny, G.E., Bruhm, D.C., Adleff, V., Noë, M., et al.: Integrated genomic, epigenomic, and expression analyses of ovarian cancer cell lines. Cell Rep. 25(9), 2617–2633 (2018)
Chen, J., Bardes, E.E., Aronow, B.J., Jegga, A.G.: ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. Nucleic Acids Res. 37(Suppl 2), W305–W311 (2009)
Wang, B., Mezlini, A.M., Demir, F., Fiume, M., Tu, Z., Brudno, M., et al.: Similarity network fusion for aggregating data types on a genomic scale. Nat. Methods 11(3), 333 (2014)
Connor, Y.D., Miao, D., Lin, D.I., Hayne, C., Howitt, B.E., Dalrymple, J.L., et al.: Germline mutations of SMARCA4 in small cell carcinoma of the ovary, hypercalcemic type and in SMARCA4-deficient undifferentiated uterine sarcoma: clinical features of a single family and comparison of large cohorts. Gynecol. Oncol. 157(1), 106–114 (2020)
Doçi, C.L., Mankame, T.P., Langerman, A., Ostler, K.R., Kanteti, R., Best, T., et al.: Characterization of NOL7 gene point mutations, promoter methylation, and protein expression in cervical cancer. Int. J. Gynecol. Pathol.: off. J. Int. Soc. Gynecol. Pathol. 31(1), 15–24 (2012)
Blanco Jr., L.Z., Kuhn, E., Morrison, J.C., Bahadirli-Talbott, A., Smith-Sehdev, A., Kurman, R.J.: Steroid hormone synthesis by the ovarian stroma surrounding epithelial ovarian tumors: a potential mechanism in ovarian tumorigenesis. Mod. Pathol. 30(4), 563–576 (2017)
