[en] New Delhi metallo- beta-lactamase 1 (NDM-1) is a subclass B1 metallo-beta -
lactamase that exhibits a broad spectrum of activity against beta -lactam antibiotics. Here
we report the kinetic study of 6 Q119X variants obtained by site-directed mutagenesis
of NDM-1. All Q119X variants were able to hydrolyze carbapenems, penicillins and first-,
second-, third-, and fourth-generation cephalosporins very efficiently. In particular,
Q119E, Q119Y, Q119V, and Q119K mutants showed improvements in kcat/Km values for
penicillins, compared with NDM-1. The catalytic efficiencies of the Q119K variant for
benzylpenicillin and carbenicillin were about 65- and 70-fold higher, respectively, than
those of NDM-1. The Q119K and Q119Y enzymes had kcat/Km values for ceftazidime
about 25- and 89-fold higher, respectively, than that of NDM-1.
Disciplines :
Biochemistry, biophysics & molecular biology
Author, co-author :
Marcoccia, Francesca
Mercuri, Paola ; Université de Liège - ULiège > Département des sciences de la vie > Macromolécules biologiques
Galleni, Moreno ; Université de Liège - ULiège > Département des sciences de la vie > Macromolécules biologiques
Celenza, Giuseppe
Amicosante, Gianfranco
Perilli, Mariagrazia
Language :
English
Title :
A Kinetic Study of the Replacement by Site Saturation Mutagenesis of Residue 119 in NDM-1 Metallo- beta-Lactamase
Publication date :
2018
Journal title :
Antimicrobial Agents and Chemotherapy
ISSN :
0066-4804
eISSN :
1098-6596
Publisher :
American Society for Microbiology, United States - District of Columbia
scite shows how a scientific paper has been cited by providing the context of the citation, a classification describing whether it supports, mentions, or contrasts the cited claim, and a label indicating in which section the citation was made.
Bibliography
Groundwater PW, Xu S, Lai F, Váradi L, Tan J, Perry JD, Hibbs DE. 2016. New Delhi metallo--lactamase-1: structure, inhibitors and detection of producers. Future Med Chem 8:993–1012. https://doi.org/10.4155/fmc-2016-0015.
Wang LH, Liu PP, Wei DD, Liu Y, Wan LG, Xiang TX, Zhang YJ. 2016. Clinical isolates of uropathogenic Escherichia coli ST131 producing NDM-7 metallo--lactamase in China. Int J Antimicrob Agents 48:41–45. https://doi.org/10.1016/j.ijantimicag.2016.03.009.
Compain F, Vandenberghe A, Gominet M, Genel N, Lebeaux D, Rama-hefasolo A, Podglajen I, Decré D. 2017. Primary osteomyelitis caused by an NDM-1-producing K. pneumoniae strain of the highly virulent sequence type 23. Emerg Microbes Infect 6:e57. https://doi.org/10.1038/emi.2017.43.
Khan AU, Maryam L, Zarrilli R. 2017. Structure, genetics and worldwide spread of New Delhi metallo--lactamase (NDM): a threat to public health. BMC Microbiol 17:101–112. https://doi.org/10.1186/s12866-017-1012-8.
Toleman M, Karthikeyan K, Sharma M, Chaudhary U, Thirunarayan M, Krishnan P, Walsh T. 2010. Recent epidemic emergence of blaNDM-1 metallo--lactamase in enteric organisms from India is mostly linked to A/C plasmids. Clin Microbiol Infect 16(Suppl 2):S30.
Bush K. 2010. Alarming -lactamase-mediated resistance in multidrug-resistant Enterobacteriaceae. Curr Opin Microbiol 13:558 –564. https://doi.org/10.1016/j.mib.2010.09.006.
Yong D, Toleman MA, Giske CG, Cho HS, Sundman K, Lee K, Walsh TR. 2009. Characterization of a new metallo--lactamase gene, blaNDM-1, and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Chemother 53:5046–5054. https://doi.org/10.1128/AAC.00774-09.
King D, Strynadka N. 2011. Crystal structure of New Delhi metallo--lactamase reveals molecular basis for antibiotic resistance. Protein Sci 20:1484–1491. https://doi.org/10.1002/pro.697.
Zhang HM, Hau Q. 2011. Crystal structure of NDM-1 reveals a common -lactam hydrolysis mechanism. FASEB J 25:2574–2582. https://doi.org/10.1096/fj.11-184036.
Kim Y, Cunningham MA, Mire J, Tesar C, Sacchettini J, Joachimiak A. 2013. NDM-1, the ultimate promiscuous enzyme: substrate recognition and catalytic mechanism. FASEB J 27:1917–1927. https://doi.org/10 .1096/fj.12-224014.
Guo Y, Wang J, Niu G, Shui W, Sun Y, Zhou H, Zhang Y, Yang C, Lou Z, Rao Z. 2011. A structural view of the antibiotic degradation enzyme NDM-1 from a superbug. Prot Cell 2:384–394. https://doi.org/10.1007/s13238-011-1055-9.
Garau G, Garcia-Sàez I, Bebrone C, Anne C, Mercuri PS, Galleni M, Frère JM, Dideberg O. 2004. Update of the standard numbering scheme for class B -lactamases. Antimicrob Agents Chemother 48:2347–2349. https://doi.org/10.1128/AAC.48.7.2347-2349.2004.
Chen J, Chen H, Zhu T, Zhou D, Zhang F, Lao X, Zheng H. 2014. Asp120Asn mutation impairs the catalytic activity of NDM-1 metallo--lactamase: experimental and computational study. Phys Chem Chem Phys 16:6709–6716. https://doi.org/10.1039/c3cp55069a.
Ho SN, Hunt HD, Horton RM, Pullen JK, Pease LR. 1989. Site-directed mutagenesis by overlap extension using a polymerase chain reaction. Gene 77:51–59. https://doi.org/10.1016/0378-1119(89)90358-2.
Marcoccia F, Bottoni C, Sabatini A, Colapietro M, Mercuri PS, Galleni M, Kerff F, Matagne A, Celenza G, Amicosante G, Perilli M. 2016. Kinetic study of laboratory mutants of NDM-1 metallo--lactamase and the importance of an isoleucine at position 35. Antimicrob Agents Chemother 60:2366–2372. https://doi.org/10.1128/AAC.00531-15.
Clinical and Laboratory Standards Institute. 2012. Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; approved standard— 9th ed. Document M07-A9. Clinical and Laboratory Standards Institute, Wayne, PA.
Segel IH. 1976. Enzyme kinetics. Biochemical calculations: how to solve mathematical problems in general biochemistry, 2nd ed, p 236–241. John Wiley & Sons, New York, NY.
Chiou J, Leung TY, Chen S. 2014. Molecular mechanisms of substrate recognition and specificity of New Delhi metallo--lactamase. Antimicrob Agents Chemother 58:5372–5378. https://doi.org/10.1128/AAC.01977-13.
De Meester F, Joris B, Reckinger G. 1987. Automated analysis of enzyme inactivation phenomena: application to -lactamases and DD-peptidases. Biochem Pharmacol 36:2393–2403. https://doi.org/10.1016/0006-2952(87)90609-5.
This website uses cookies to improve user experience. Read more
Save & Close
Accept all
Decline all
Show detailsHide details
Cookie declaration
About cookies
Strictly necessary
Performance
Strictly necessary cookies allow core website functionality such as user login and account management. The website cannot be used properly without strictly necessary cookies.
This cookie is used by Cookie-Script.com service to remember visitor cookie consent preferences. It is necessary for Cookie-Script.com cookie banner to work properly.
Performance cookies are used to see how visitors use the website, eg. analytics cookies. Those cookies cannot be used to directly identify a certain visitor.
Used to store the attribution information, the referrer initially used to visit the website
Cookies are small text files that are placed on your computer by websites that you visit. Websites use cookies to help users navigate efficiently and perform certain functions. Cookies that are required for the website to operate properly are allowed to be set without your permission. All other cookies need to be approved before they can be set in the browser.
You can change your consent to cookie usage at any time on our Privacy Policy page.