Complete coding sequence of one H9 and three H7 low pathogenic influenza viruses circulating in wild birds in Belgium, 2009-2012

Van Borm, Steven; Rosseel, Toon; Marché, Sylvie; Steensels, Mieke; Vangeluwe, Didier; Linden, Annick; van den Berg, Thierry; Lambrecht, Bénédicte

doi:10.1128/genomeA.00540-16

Article (Scientific journals)

Complete coding sequence of one H9 and three H7 low pathogenic influenza viruses circulating in wild birds in Belgium, 2009-2012

Van Borm, Steven; Rosseel, Toon; Marché, Sylvie et al.

2016 • In Genome Announcements, 4 (3)

Peer reviewed

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https://hdl.handle.net/2268/197595

DOI
10.1128/genomeA.00540-16

PubMed
27284153

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Disciplines :

Microbiology

Author, co-author :

Van Borm, Steven

Rosseel, Toon

Marché, Sylvie

Steensels, Mieke

Vangeluwe, Didier

Linden, Annick ; Université de Liège > Département des maladies infectieuses et parasitaires (DMI) > Santé et pathologies de la faune sauvage

van den Berg, Thierry

Lambrecht, Bénédicte

Language :

English

Title :

Complete coding sequence of one H9 and three H7 low pathogenic influenza viruses circulating in wild birds in Belgium, 2009-2012

Publication date :

09 June 2016

Journal title :

Genome Announcements

eISSN :

2169-8287

Publisher :

American Society for Microbiology, Washington, United States - District of Columbia

Volume :

Issue :

Peer reviewed :

Peer reviewed

Available on ORBi :

since 31 May 2016

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Bibliography

Steensels M, Vangeluwe D, Linden AC, Houdart P, van den Berg T, Lambrecht B. 2016. One decade of active avian influenza wild bird surveillance in Belgium showed a higher viroprevalence in hunter-harvested than live-ringed birds. Avian Dis, in press.
Martin M. 2011. Cutadapt removes adapter sequences from highthroughput sequencing reads. EMBnet j 17:10-12. http://dx.doi.org/10.14806/ej.17.1.200.
Joshi NA, Fass J. 2011. Sickle: a sliding-window, adaptive, quality-based trimming tool for FastQ files (version 1.33). https://github.com/najoshi/sickle.
Milne I, Stephen G, Bayer M, Cock PJ, Pritchard L, Cardle L, Shaw PD, MarshallD. 2013. Using Tablet for visual exploration of second-generation sequencing data. Brief Bioinform 14:193-202. http://dx.doi.org/10.1093/bib/bbs012.
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic Local Alignment Search Tool. J Mol Biol 215:403-410. http://dx.doi.org/10.1016/S0022-2836(05)80360-2.