Absil, P.-A., Mahony, R., Sepulchre, R., (2008) Optimization Algorithms on Matrix Manifolds, , Princeton University Press, Princeton, January
Alter, O., Brown, P.O., Botstein, D., Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms (2003) Proc Natl Acad Sci USA, 100 (6), pp. 3351-3356
Brockett, R.W., Dynamical systems that sort lists, diagonalize matrices and solve linear programming problems (1991) Linear Algebra Appl., 146, pp. 79-91
Brunet, J.P., Tamayo, P., Golub, T.R., Mesirov, J.P., Metagenes and molecular pattern discovery using matrix factorization (2004) Proc Natl Acad Sci USA, 101 (12), pp. 4164-4169
Cadima, J., Jolliffe, I.T., Loadings and correlations in the interpretation of principal components (1995) Journal of Applied Statistics, 22, pp. 203-214
D'aspremont, A., El Ghaoui, L., Jordan, M.I., Lanckriet, G.R.G., A direct formulation for sparse PCA using semidefinite programming (2007) Siam Review, 49, pp. 434-448
D'aspremont, A., Bach, F.R., El Ghaoui, L., Optimal solutions for sparse principal component analysis (2008) Journal of Machine Learning Research, 9, pp. 1269-1294
Fraikin, C., Nesterov, Yu., Van Dooren, P., A gradient-type algorithm optimizing the coupling between matrices (2008) Linear Algebra and Its Applications, 429 (5-6), pp. 1229-1242
Golub, G.H., Van Loan, C.F., (1996) Matrix Computations, , The Johns Hopkins University Press
Horn, R.A., Johnson, C.A., (1985) Matrix Analysis, , Cambridge University Press, Cambridge, UK
Jolliffe, I.T., Rotation of principal components: Choice of normalization constraints (1995) Journal of Applied Statistics, 22, pp. 29-35
Jolliffe, I.T., Trendafilov, N.T., Uddin, M., A modified principal component technique based on the LASSO (2003) Journal of Computational and Graphical Statistics, 12 (3), pp. 531-547
Liebermeister, W., Linear modes of gene expression determined by independent component analysis (2002) Bioinformatics, 18 (1), pp. 51-60
MacKey, L., Deflation methods for sparse PCA (2008) Advances in Neural Information Processing Systems (NIPS), pp. 1017-1024
Moghaddam, B., Weiss, Y., Avidan, S., Spectral bounds for sparse PCA: Exact and greedy algorithms (2006) Advances in Neural Information Processing Systems, 18, pp. 915-922. , Y. Weiss, B. Schölkopf, and J. Platt, editors. MIT Press, Cambridge, MA
Naderi, A., Teschendorff, A.E., Barbosa-Morais, N.L., Pinder, S.E., Green, A.R., Powe, D.G., Robertson, J.F.R., Caldas, C., A gene expression signature to predict survival in breast cancer across independent data sets (2007) Oncogene, 26, pp. 1507-1516
Parlett, B.N., (1980) The Symmetric Eigenvalue Problem, , Prentice-Hall Inc., Englewood Cliffs, N.J. ISBN 0-13-880047-2. Prentice-Hall Series in Computational Mathematics
Riva, A., Carpentier, A.-S., Torrésani, B., Hénaut, A., Comments on selected fundamental aspects of microarray analysis (2005) Computational Biology and Chemistry, 29 (5), pp. 319-336
Shen, H., Huang, J.Z., Sparse principal component analysis via regularized low rank matrix approximation (2008) Journal of Multivariate Analysis, 99 (6), pp. 1015-1034
Sotiriou, C., Wirapati, P., Loi, S., Harris, A., Fox, S., Smeds, J., Nordgren, H., Delorenzi, M., Gene expression profiling in breast cancer: Understanding the molecular basis of histologic grade to improve prognosis (2006) J Natl Cancer Inst, 98 (4), pp. 262-272
Teschendorff, A., Journée, M., Absil, P.-A., Sepulchre, R., Caldas, C., Elucidating the altered transcriptional programs in breast cancer using independent component analysis (2007) PLoS Computational Biology, 3 (8), pp. 1539-1554
Tibshirani, R., Regression shrinkage and selection via the lasso (1996) Journal of the Royal Statistical Society, 58 (2), pp. 267-288. , Series B
Van De Vijver, M.J., He, Y.D., Van't Veer, L.J., Dai, H., Hart, A.A., Voskuil, D.W., Schreiber, G.J., Bernards, R., A gene-expression signature as a predictor of survival in breast cancer (2002) N Engl J Med, 347 (25), pp. 1999-2009
Wang, Y., Klijn, J.G., Zhang, Y., Sieuwerts, A.M., Look, M.P., Yang, F., Talantov, D., Foekens, J.A., Geneexpression profiles to predict distant metastasis of lymph-node-negative primary breast cancer (2005) Lancet, 365 (9460), pp. 671-679
Zou, H., Hastie, T., Tibshirani, R., Sparse principal component analysis (2006) Journal of Computational and Graphical Statistics, 15 (2), pp. 265-286