EEG andMEG Data Analysis in SPM8

[en] SPMis a free and open source software written inMATLAB (The MathWorks, Inc.). In addition to standardM/EEG preprocessing, we presently offer three main analysis tools: (i) statistical analysis of scalp-maps, time-frequency images, and volumetric 3D source reconstruction images based on the general linear model, with correction for multiple comparisons using random field theory; (ii) Bayesian M/EEG source reconstruction, including support for group studies, simultaneous EEG and MEG, and fMRI priors; (iii) dynamic causal modelling (DCM), an approach combining neural modelling with data analysis for which there are several variants dealing with evoked responses, steady state responses (power spectra and cross-spectra), induced responses, and phase coupling. SPM8 is integrated with the FieldTrip toolbox , making it possible for users to combine a variety of standard analysis methods with new schemes implemented in SPM and build custom analysis tools using powerful graphical user interface (GUI) and batching tools.

Disciplines :

Engineering, computing & technology: Multidisciplinary, general & others

Author, co-author :

Litvak, Vladimir

Mattout, Jérémie

Kiebel, Stefan

Phillips, Christophe ; Université de Liège - ULiège > Centre de recherches du cyclotron

Henson, Richard

Kilner, James

Barnes, Gareth

Oostenveld, Robert

Daunizeau, Jean

Flandin, Guillaume

Penny, Will

Friston, Karl

Language :

English

Title :

EEG andMEG Data Analysis in SPM8

Publication date :

2011

Journal title :

Computational Intelligence and Neuroscience

ISSN :

1687-5265

eISSN :

1687-5273

Publisher :

Hindawi Publishing Corporation, Egypt

Volume :

2011

Issue :

ID 852961

Pages :

Peer reviewed :

Peer Reviewed verified by ORBi

Additional URL :

http://www.hindawi.com/journals/cin/2011/852961/

Available on ORBi :

since 09 February 2015

Statistics

Number of views

110 (3 by ULiège)

Number of downloads

300 (1 by ULiège)

More statistics

Scopus citations^®

442

Scopus citations^®
without self-citations

354

OpenCitations

397

Bibliography

Friston K. J., Frith C. D., Liddle P. F., Frackowiak R. S. J., Comparing functional (PET) images: the assessment of significant change Journal of Cerebral Blood Flow and Metabolism 1991 11 4 690 699
Friston K. J., Frith C. D., Liddle P. F., Dolan R. J., Lammertsma A. A., Frackowiak R. S. J., The relationship between global and local changes in PET scans Journal of Cerebral Blood Flow and Metabolism 1990 10 4 458 466 (Pubitemid 20209192)
Friston K. J., Holmes A. P., Worsley K. J., Poline J. P., Frith C. D., Frackowiak R. S. J., Statistical parametric maps in functional imaging: a general linear approach Human Brain Mapping 1994 2 4 189 210 (Pubitemid 124008664)
Worsley K. J., Friston K. J., Analysis of fMRI time-series revisitedagain NeuroImage 1995 2 3 173 181
Ashburner J., Friston K. J., Unified segmentation NeuroImage 2005 26 3 839 851 (Pubitemid 40825026)
Ashburner J., Friston K. J., Voxel-based morphometrythe methods NeuroImage 2000 11 6 I 805 821
Friston K. J., Penny W., Posterior probability maps and SPMs NeuroImage 2003 19 3 1240 1249 (Pubitemid 36918260)
Friston K. J., Harrison L., Penny W., Dynamic causal modelling NeuroImage 2003 19 4 1273 1302 (Pubitemid 37025831)
Penny W. D., Stephan K. E., Mechelli A., Friston K. J., Comparing dynamic causal models NeuroImage 2004 22 3 1157 1172 (Pubitemid 38829205)
Penny W. D., Stephan K. E., Daunizeau J., Rosa M. J., Friston K. J., Schofield T. M., Leff A. P., Comparing families of dynamic causal models PLoS Computational Biology 2010 6 3
Stephan K. E., Penny W. D., Daunizeau J., Moran R. J., Friston K. J., Bayesian model selection for group studies NeuroImage 2009 46 4 1004 1017
Kiebel S. J., Friston K. J., Statistical parametric mapping for event-related potentials (II): a hierarchical temporal model NeuroImage 2004 22 2 503 520 (Pubitemid 38759413)
Kiebel S. J., Friston K. J., Statistical parametric mapping for event-related potentials: I. Generic considerations NeuroImage 2004 22 2 492 502 (Pubitemid 38759412)
Kilner J., Friston K., Topological inference for EEG and MEG Annals of Applied Statistics 2010 4 3 1272 1290
Kilner J. M., Kiebel S. J., Friston K. J., Applications of random field theory to electrophysiology Neuroscience Letters 2005 374 3 174 178 (Pubitemid 40128290)
Phillips C., Mattout J., Rugg M. D., Maquet P., Friston K. J., An empirical Bayesian solution to the source reconstruction problem in EEG NeuroImage 2005 24 4 997 1011 (Pubitemid 40164502)
Friston K., Harrison L., Daunizeau J., Kiebel S., Phillips C., Trujillo-Barreto N., Henson R., Flandin G., Mattout J., Multiple sparse priors for the M/EEG inverse problem NeuroImage 2008 39 3 1104 1120
Mattout J., Phillips C., Penny W. D., Rugg M. D., Friston K. J., MEG source localization under multiple constraints: an extended Bayesian framework NeuroImage 2006 30 3 753 767
Kiebel S. J., Daunizeau J., Phillips C., Friston K. J., Variational Bayesian inversion of the equivalent current dipole model in EEG/MEG NeuroImage 2008 39 2 728 741 (Pubitemid 350117631)
David O., Kiebel S. J., Harrison L. M., Mattout J., Kilner J. M., Friston K. J., Dynamic causal modeling of evoked responses in EEG and MEG NeuroImage 2006 30 4 1255 1272
Chen C. C., Kiebel S. J., Friston K. J., Dynamic causal modelling of induced responses NeuroImage 2008 41 4 1293 1312
Moran R. J., Stephan K. E., Seidenbecher T., Pape H. C., Dolan R. J., Friston K. J., Dynamic causal models of steady-state responses NeuroImage 2009 44 3 796 811
Penny W. D., Litvak V., Fuentemilla L., Duzel E., Friston K., Dynamic causal models for phase coupling Journal of Neuroscience Methods 2009 183 1 19 30
Brett M., Penny W., Kiebel S., Friston K., Ashburner J., Kiebel S., Nichols T., Penny W., Parametric procedures Statistical Parametric Mapping 2007 Amsterdam, The Netherlands Elsevier 223 231
Kriegeskorte N., Simmons W. K., Bellgowan P. S., Baker C. I., Circular analysis in systems neuroscience: the dangers of double dipping Nature Neuroscience 2009 12 5 535 540
Penny W., Henson R., Friston K., Ashburner J., Kiebel S., Nichols T., Penny W., Hierarchical models Statistical Parametric Mapping 2007 Amsterdam, The Netherlands Elsevier 149 155
Baillet S., Rira J. J., Main G., Magin J. F., Aubert J., Ganero L., Evaluation of inverse methods and head models for EEG source localization using a human skull phantom Physics in Medicine and Biology 2001 46 1 77 96 (Pubitemid 32104872)
Dale A. M., Sereno M. I., Improved localization of cortical activity by combining EEG and MEG with MRI cortical surface reconstruction: a linear approach Journal of Cognitive Neuroscience 1993 5 2 162 176 (Pubitemid 23123842)
Hmlinen M. S., Ilmoniemi R. J., Interpreting magnetic fields of the brain: minimum norm estimates Medical and Biological Engineering Computing 1994 32 1 35 42 (Pubitemid 24083542)
Pascual-Marqui R. D., Michel C. M., Lehmann D., Low resolution electromagnetic tomography: a new method for localizing electrical activity in the brain International Journal of Psychophysiology 1994 18 1 49 65 (Pubitemid 24344515)
Friston K., Henson R., Phillips C., Mattout J., Bayesian estimation of evoked and induced responses Human Brain Mapping 2006 27 9 722 735 (Pubitemid 44412048)
Friston K. J., Penny W., Phillips C., Kiebel S., Hinton G., Ashburner J., Classical and Bayesian inference in neuroimaging: theory NeuroImage 2002 16 2 465 483 (Pubitemid 34852462)
Mattout J., Henson R. N., Friston K. J., Canonical source reconstruction for MEG Computational Intelligence and Neuroscience 2007 2007 10
Kim H. C., Ghahramani Z., Bayesian Gaussian process classification with the EM-EP algorithm IEEE Transactions on Pattern Analysis and Machine Intelligence 2006 28 12 1948 1959 (Pubitemid 46405706)
Ripley B., Cherkassy V., Friedman J., Wechsler H., Flexible non-linear approaches to classification From Statistics to Neural Networks 1994 New York, NY, USA Springer 105 126
Henson R. N., Mattout J., Phillips C., Friston K. J., Selecting forward models for MEG source-reconstruction using model-evidence NeuroImage 2009 46 1 168 176
Besl P. J., McKay N. D., A method for registration of 3-D shapes IEEE Transactions on Pattern Analysis and Machine Intelligence 1992 14 2 239 256
Nolte G., The magnetic lead field theorem in the quasi-static approximation and its use for magnetoenchephalography forward calculation in realistic volume conductors Physics in Medicine and Biology 2003 48 22 3637 3652 (Pubitemid 37483472)
Phillips C., Mattout J., Friston K. J., Forward models for EEG Statistical Parametric Mapping 2007 Amsterdam, The Netherlands Elsevier 352 366
Geselowitz D., On bioelectric potentials in an inhomogeneous volume conductor Biophysical Journal 1967 7 1 11
Hmlinen M. S., Sarvas J., Realistic conductivity geometry model of the human head for interpretation of neuromagnetic data IEEE Transactions on Biomedical Engineering 1989 36 2 165 171 (Pubitemid 19061133)
de Munck J. C., A linear discretization of the volume conductor boundary integral equation using analytically integrated elements IEEE Transactions on Biomedical Engineering 1992 39 9 986 990 (Pubitemid 23121832)
Mosher J. C., Leahy R. M., Lewis P. S., EEG and MEG: forward solutions for inverse methods IEEE Transactions on Biomedical Engineering 1999 46 3 245 259
Henson R. N., Flandin G., Friston K. J., Mattout J., A Parametric empirical bayesian framework for fMRI-constrained MEG/EEG source reconstruction Human Brain Mapping 2010 31 10 1512 1531
Henson R. N., Mouchlianitis E., Friston K. J., MEG and EEG data fusion: simultaneous localisation of face-evoked responses NeuroImage 2009 47 2 581 589
Litvak V., Friston K., Electromagnetic source reconstruction for group studies NeuroImage 2008 42 4 1490 1498
Scherg M., Von Cramon D., Evoked dipole source potentials of the human auditory cortex Electroencephalography and Clinical Neurophysiology 1986 65 5 344 360 (Pubitemid 16048434)
Scherg M., Berg P., New concepts of brain source imaging and localization Electroencephalography and Clinical Neurophysiology. Supplement 1996 46 127 137
Moran R. J., Kiebel S. J., Stephan K. E., Reilly R. B., Daunizeau J., Friston K. J., A neural mass model of spectral responses in electrophysiology NeuroImage 2007 37 3 706 720 (Pubitemid 47248309)
Moran R. J., Stephan K. E., Kiebel S. J., Rombach N., O'Connor W. T., Murphy K. J., Reilly R. B., Friston K. J., Bayesian estimation of synaptic physiology from the spectral responses of neural masses NeuroImage 2008 42 1 272 284
Kiebel S. J., Garrido M. I., Moran R., Chen C. C., Friston K. J., Dynamic causal modeling for EEG and MEG Human Brain Mapping 2009 30 6 1866 1876
Kiebel S. J., David O., Friston K. J., Dynamic causal modelling of evoked responses in EEG/MEG with lead field parameterization NeuroImage 2006 30 4 1273 1284
Kiebel S. J., Garrido M. I., Friston K. J., Dynamic causal modelling of evoked responses: the role of intrinsic connections NeuroImage 2007 36 2 332 345 (Pubitemid 46710451)
Fastenrath M., Friston K. J., Kiebel S. J., Dynamical causal modelling for M/EEG: spatial and temporal symmetry constraints NeuroImage 2009 44 1 154 163
Garrido M. I., Kilner J. M., Kiebel S. J., Friston K. J., Evoked brain responses are generated by feedback loops Proceedings of the National Academy of Sciences of the United States of America 2007 104 52 20961 20966
Garrido M. I., Kilner J. M., Kiebel S. J., Stephan K. E., Friston K. J., Dynamic causal modelling of evoked potentials: a reproducibility study NeuroImage 2007 36 3 571 580 (Pubitemid 46907636)
Penny W. D., Friston K. J., Ashburner J. T., Kiebel S. J., Nichols T. E., Statistical Parametric Mapping: The Analysis of Functional Brain Images 2007 Amsterdam, The Netherlands Elsevier
Chen C. C., Henson R. N., Stephan K. E., Kilner J. M., Friston K. J., Forward and backward connections in the brain: a DCM study of functional asymmetries NeuroImage 2009 45 2 453 462
Daunizeau J., Kiebel S. J., Friston K. J., Dynamic causal modelling of distributed electromagnetic responses NeuroImage 2009 47 2 590 601
Marreiros A. C., Daunizeau J., Kiebel S. J., Friston K. J., Population dynamics: variance and the sigmoid activation function NeuroImage 2008 42 1 147 157
Marreiros A. C., Kiebel S. J., Friston K. J., A dynamic causal model study of neuronal population dynamics NeuroImage 2010 51 1 91 101
Marreiros A. C., Kiebel S. J., Daunizeau J., Harrison L. M., Friston K. J., Population dynamics under the Laplace assumption NeuroImage 2009 44 3 701 714
Garrido M. I., Friston K. J., Kiebel S. J., Stephan K. E., Baldeweg T., Kilner J. M., The functional anatomy of the MMN: a DCM study of the roving paradigm NeuroImage 2008 42 2 936 944
Scherg M., Picton T. W., Separation and identification of event-related potential components by brain electric source analysis Electroencephalography and Clinical Neurophysiology. Supplement 1991 42 24 37
Ltkenhner B., Magnetoencephalography and its Achilles' heel Journal of Physiology Paris 2003 97 4-6 641 658
Scherg M., Ille N., Bornfleth H., Berg P., Advanced tools for digital EEG review: virtual source montages, whole-head mapping, correlation, and phase analysis Journal of Clinical Neurophysiology 2002 19 2 91 112 (Pubitemid 34538844)
Penny W. D., Roberts S. J., Bayesian multivariate autoregressive models with structured priors IEE Proceedings: Vision, Image and Signal Processing 2002 149 1 33 41 (Pubitemid 34474675)
Wager T. D., Keller M. C., Lacey S. C., Jonides J., Increased sensitivity in neuroimaging analyses using robust regression NeuroImage 2005 26 1 99 113 (Pubitemid 40602890)
Berg P., Scherg B. M., A multiple source approach to the correction of eye artifacts Electroencephalography and Clinical Neurophysiology 1994 90 3 229 241 (Pubitemid 24090795)
Litvak V., Komssi S., Scherg M., Hoechstetter K., Classen J., Zaaroor M., Pratt H., Kahkonen S., Artifact correction and source analysis of early electroencephalographic responses evoked by transcranial magnetic stimulation over primary motor cortex NeuroImage 2007 37 1 56 70 (Pubitemid 47068999)
van Veen B. D., van Drongelen W., Yuchtman M., Suzuki A., Localization of brain electrical activity via linearly constrained minimum variance spatial filtering IEEE Transactions on Biomedical Engineering 1997 44 9 867 880 (Pubitemid 27357681)
Gross J., Kujala J., Hmlinen M., Timmermann L., Schnitzler A., Salmelin R., Dynamic imaging of coherent sources: studying neural interactions in the human brain Proceedings of the National Academy of Sciences of the United States of America 2001 98 2 694 699 (Pubitemid 32105105)