Anderson, M. G. and Burt, T. P.: The role of topography in controlling throughflow generation, Earth Surf. Proc., 3, 331-344, doi:10.1002/esp. 3290030402, 1978.
Bartolino, J.: The Rio Grande-Competing demands for a desert river, Heat as a Tool for Studying the Movement of GroundWater Near Streams, edited by: Stonestrom, D. A. and Constantz, J., 8-16, 2003.
Becker, M. W., Georgian, T., Ambrose, H., Siniscalchi, J., and Fredrick, K.: Estimating flow and flux of ground water discharge using water temperature and velocity, J. Hydrol., 296, 221-233, doi:10.1016/j.jhydrol.2004.03.025, 2004.
Blasch, K., Constantz, J., and Stonestrom, D. A.: Thermal methods for investigation ground-water recharge, US Geological Survey Professional Paper, 1703, 353-376, 2007.
Boano, F., Revelli, R., and Ridolfi, L.: Bedform-induced hyporheic exchange with unsteady flows, Adv.Water Resour., 30, 148-156, 2007.
Bonell, M.: Selected challenges in runoff generation research in forests from the hillslope to headwater drainage basin scale, J. Am. Water Resour. As., 34, 765-785, doi:10.1111/j.1752-1688.1998.tb01514.x, 1998.
Constantz, J.: Interaction Between Stream Temperature, Streamflow, and Groundwater Exchanges in Alpine Streams, Water Resour. Res., 34, 1609-1615, 1998.
Constantz, J. and Thomas, C. L.: The Use of Streambed Temperature Profiles to Estimate the Depth, Duration, and Rate of Percolation Beneath Arroyos, Water Resour. Res., 32, 3597-3602, 1996.
Constantz, J., Cox, M. H., Sarma, L., and Mendez, G.: The Santa Clara River-The last natural river of Los Angeles, Heat as a Tool for Studying the Movement of GroundWater Near Streams, edited by: Stonestrom, D. A. and Constantz, J., USGS Circular, 1260, 21-27, 2003.
D'angelo, D., Webster, J., Gregory, S., and Meyer, J.: Transient storage in Appalachian and Cascade mountain streams as related to hydraulic characteristics, J. N. Am. Benthol. Soc., 223-235, 1993.
Fenicia, F., McDonnell, J. J., and Savenije, H. H. G.: Learning from model improvement: On the contribution of complementary data to process understanding, Water Resour. Res., 44, W06419, 10.1029/2007WR006386, 2008.
Gomi, T., Sidle, R. C., Miyata, S., Kosugi, K., and Onda, Y.: Dynamic runoff connectivity of overland flow on steep forested hillslopes: Scale effects and runoff transfer, Water Resour. Res., 44, W08411, 10.1029/2007WR005894, 2008.
Ha, K., Koh, D., Yum, B., and Lee, K.: Estimation of river stage effect on groundwater level, discharge, and bank storage and its field application, Geosci. J., 12, 191-204, 2008.
Habel, F. and Bagtzoglou, A.: Wave induced flow and transport in sediment beds, J. Am. Water Resour. As., 41, 461-476, 2005.
Hart, D., Mulholland, P., Marzolf, E., DeAngelis, D., and Hendricks, S.: Relationships between hydraulic parameters in a small stream under varying flow and seasonal conditions, Hydrol. Process., 13, 1497-1510, 1999.
Harvey, J. and Bencala, K.: The effect of streambed topography on surface-subsurface water exchange in mountain catchments, Water Resour. Res., 29, 89-98, 1993.
Harvey, J., Wagner, B., and Bencala, K.: Evaluating the reliability of the stream tracer approach to characterize streamsubsurface water exchange, Water Resour. Res., 32, 2441-2451, doi:10.1029/96WR01268, 1996.
Harvey, J., Conklin, M., and Koelsch, R.: Predicting changes in hydrologic retention in an evolving semi-arid alluvial stream, Adv. Water Resour., 26, 939-950, 2003.
Hjelmfelt Jr., A. T. and Burwell, R. E.: Spatial Variability of Runoff, J. Irrig. Drain. Eng., 110, 46-54, doi:10.1061/(ASCE)0733-9437(1984)110:1(46), 1984.
Jothityangkoon, C., Sivapalan, M., and Farmer, D. L.: Process controls of water balance variability in a large semi-arid catchment: downward approach to hydrological model development, J. Hydrol., 254, 174-198, doi:10.1016/S0022- 1694(01)00496-6, 2001.
Kleměs, V.: Conceptualization and scale in hydrology, J. Hydrol., 65, 1-23, doi:10.1016/0022-1694(83)90208-1, 1983.
Lal, A.: Modification of canal flow due to stream-aquifer interaction, J. Hydraul. Eng., 127, 567-576, 2001.
Lapham, W. W.: Use of temperature profiles beneath streams to determine rates of vertical ground-water flow and vertical hydraulic conductivity, Available from Books and Open Files Report Section USGS Box 25425, Denver, CO 80225, USGS Water-Supply Paper 2337, 1989.
Legrand-Marcq, C. and Laudelout, H.: Longitudinal dispersion in a forest stream, J. Hydrol., 78, 317-324, 1985.
Monteith, J. L.: Evaporation and surface temperature, Q. J. Roy. Meteor. Soc., 107, 1-27, 1981.
Morrice, J., Valett, H., Dahm, C., and Campana, M.: Alluvial characteristics, groundwater-surface water exchange and hydrological retention in headwater streams, Hydrol. Process., 11, 253-267, 1997.
Niswonger, R. G., Prudic, D. E., Pohll, G., and Constantz, J.: Incorporating seepage losses into the unsteady streamflow equations for simulating intermittent flow along mountain front streams, Water Resour. Res., 41, W06006, 10.1029/2004WR003677, 2005.
Ragan, R. M.: An experimental investigation of partial area contributions, proc Berne Symp, Int. Assoc. Sci. Hydrol. Publ., 1968.
Retter, M., Kienzler, P., and Germann, P. F.: Vectors of subsurface stormflow in a layered hillslope during runoff initiation, Hydrol. Earth Syst. Sci., 10, 309-320, doi:10.5194/hess-10-309-2006, 2006.
Runkel, R. L.: One-dimensional transport with inflow and storage (OTIS): A solute transport model for streams and rivers, US Geological SurveyWater-Resources Investigation Report, 98, 4018, 1998.
Schmid, B. H.: Can Longitudinal Solute Transport Parameters Be Transferred to Different Flow Rates?, J. Hydrol. Eng., 13, 505-509, doi:10.1061/(ASCE)1084-0699(2008)13:6(505), 2008.
Schmid, B. H., Innocenti, I., and Sanfilippo, U.: Characterizing solute transport with transient storage across a range of flow rates: The evidence of repeated tracer experiments in Austrian and Italian streams, Adv. Water Resour., 33, 1340-1346, doi:10.1016/j.advwatres.2010.06.001, 2010.
Seibert, J. and McDonnell, J. J.: On the dialog between experimentalist and modeler in catchment hydrology: Use of soft data for multicriteria model calibration, Water Resour. Res., 38, 1241, doi:10.1029/2001WR000978, 2002.
Selker, J., van de Giesen, N., Westhoff, M., Luxemburg, W., and Parlange, M. B.: Fiber optics opens window on stream dynamics, Geophys. Res. Lett., 33, L24401, doi:10.1029/2006GL027979, 2006a.
Selker, J. S., Thvenaz, L., Huwald, H., Mallet, A., Luxemburg, W., van de Giesen, N., Stejskal, M., Zeman, J., Westhoff, M., and Parlange, M. B.: Distributed fiber-optic temperature sensing for hydrologic systems, Water Resour. Res., 42, W12202, doi:10.1029/2006WR005326, 2006b.
Silliman, S. E., Ramirez, J., andMcCabe, R. L.: Quantifying downflow through creek sediments using temperature time series: onedimensional solution incorporating measured surface temperature, J. Hydrol., 167, 99-119, doi:10.1016/0022-1694(94)02613-G, 1995.
Sivapalan, M., Blschl, G., Zhang, L., and Vertessy, R.: Downward approach to hydrological prediction, Hydrol. Process., 17, 2101-2111, 2003.
Sklash, M. G. and Farvolden, R. N.: The role of groundwater in storm runoff, J. Hydrol., 43, 45-65, doi:10.1016/0022-1694(79)90164-1, 1979.
Stallman, R. W.: Steady one-dimensional fluid flow in a semiinfinite porous medium with sinusoidal surface temperature, J. Geophys. Res., 70, 2821-2827, 1965.
Stelling, G. S. and Duinmeijer, S. P. A.: A staggered conservative scheme for every Froude number in rapidly varied shallow water flows, Int. J. Numer. Meth. Fl., 43, 1329-1354, 2003.
Taniguchi, M. and Sharma, M. L.: Solute and heat transport experiments for estimating recharge rate, J. Hydrol., 119, 57-69, doi:10.1016/0022-1694(90) 90034-U, 1990.
Toffolon, M., Siviglia, A., and Zolezzi, G.: Thermal wave dynamics in rivers affected by hydropeaking, Water Resour. Res., 46, W08536, doi:10.1029/2009WR008234, 2010.
Tromp-van Meerveld, H. J. and McDonnell, J. J.: Threshold relations in subsurface stormflow: 1. A 147-storm analysis of the Panola hillslope, Water Resour. Res., 42, W02410, doi:10.1029/2004WR003778, 2006.
Tromp-van Meerveld, H. J., James, A. L., McDonnell, J. J., and Peters, N. E.: A reference data set of hillslope rainfall-runoff response, Panola Mountain Research Watershed, United States, Water Resour. Res., 44, W06502, doi:10.1029/2007WR006299, 2008.
Tyler, S. W., Selker, J. S., Hausner, M. B., Hatch, C. E., Torgersen, T., Thodal, C. E., and Schladow, S. G.: Environmental temperature sensing using Raman spectra DTS fiber-optic methods, Water Resour. Res., 45, W00D23, doi:10.1029/2008WR007052, 2009.
Uchida, T., Tromp-van Meerveld, I., and McDonnell, J. J.: The role of lateral pipe flow in hillslope runoff response: an intercomparison of non-linear hillslope response, J. Hydrol., 311, 117-133, doi:10.1016/j.jhydrol.2005.01. 012, 2005.
Uhlenbrook, S. and Hoeg, S.: Quantifying uncertainties in tracerbased hydrograph separations: a case study for two-, three-and five-component hydrograph separations in a mountainous catchment, Hydrol. Process., 17, 431-453, doi:10.1002/hyp.1134, http://dx.doi.org/10.1002/hyp.1134, 2003.
Weiler, M., Naef, F., and Leibundgut, C.: Study of runoff generation on hillslopes using tracer experiments and a physically-based numerical hillslope model, IAHS Publications-Series of Proceedings and Reports-International Association of Hydrological Sciences, 248, 353-362, 1998.
Westhoff, M. C., Savenije, H. H. G., Luxemburg,W. M. J., Stelling, G. S., van de Giesen, N. C., Selker, J. S., Pfister, L., and Uhlenbrook, S.: A distributed stream temperature model using high resolution temperature observations, Hydrol. Earth Syst. Sci., 11, 1469-1480, doi:10.5194/hess-11-1469- 2007, 2007.
Westhoff, M. C., Bogaard, T. A., and Savenije, H. H. G.: Quantifying the effect of in-stream rock clasts on the retardation of heat along a stream, Adv. Water Resour., 33, 1417-1425, doi:10.1016/j.advwatres.2010.02.006, 2010.
Westhoff, M. C., Gooseff, M. N., Bogaard, T. A., and Savenije, H. H. G.: Quantifying hyporheic exchange at high spatial resolution using natural temperature variations along a first order stream, Water Resour. Res., under review, 2011.
Woods, R. and Rowe, L.: The changing spatial variability of subsurface flow across a hillside, J. Hydrol., New Zealand, 35, 51-86, 1996.
Wörman, A. and Wachniew, P.: Reach scale and evaluation methods as limitations for transient storage properties in streams and rivers, Water Resour. Res., 43, W10405, doi:10.1029/2006WR005808, 2007.
Wroblicky, G., Campana, M., Valett, H., and Dahm, C.: Seasonal variation in surface-subsurface water exchange and lateral hyporheic area of two stream-aquifer systems, Water Resour. Res., 34, 317-328, 1998.
Zarnetske, J. P., Gooseff, M. N., Brosten, T. R., Bradford, J. H., McNamara, J. P., and Bowden,W. B.: Transient storage as a function of geomorphology, discharge, and permafrost active layer conditions in Arctic tundra streams, Water Resour. Res., 43, W07410, doi:10.1029/2005WR004816, 2007.