Current impact and future directions of high throughput sequencing in plant virus diagnostics.

[en] The ability to provide a fast, inexpensive and reliable diagnostic for any given viral infection is a key parameter in efforts to fight and control these ubiquitous pathogens. The recent developments of highthroughput sequencing (also called Next Generation Sequencing – NGS) technologies and bioinformatics have drastically changed the research on viral pathogens. It is now raising a growing interest for virus diagnostics. This review provides a snapshot vision on the current use and impact of high throughput sequencing approaches in plant virus characterization. More specifically, this review highlights the potential of these new technologies and their interplay with current protocols in the future of molecular diagnostic of plant viruses. The current limitations that will need to be addressed for a wider adoption of high-throughput sequencing in plant virus diagnostics are thoroughly discussed.

Disciplines :

Phytobiology (plant sciences, forestry, mycology...)

Author, co-author :

Massart, Sébastien ; Université de Liège - ULiège > Sciences agronomiques > Phytopathologie

Olmos, Antonio

Jijakli, Haissam ; Université de Liège - ULiège > Sciences agronomiques > Phytopathologie

Candresse, Thierry

Language :

English

Title :

Current impact and future directions of high throughput sequencing in plant virus diagnostics.

Publication date :

2014

Journal title :

Virus Research

ISSN :

0168-1702

eISSN :

1872-7492

Publisher :

Elsevier Science, Amsterdam, Netherlands

Volume :

188

Pages :

90-96

Peer reviewed :

Peer Reviewed verified by ORBi

Available on ORBi :

since 05 May 2014

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66 (6 by ULiège)

Number of downloads

1 (1 by ULiège)

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Scopus citations^®

191

Scopus citations^®
without self-citations

142

OpenCitations

158

OpenAlex citations

207

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