Mainil, Jacques ; Université de Liège - ULiège > Département des maladies infectieuses et parasitaires > Bactériologie et pathologie des maladies bactériennes
Blanco, J
Moulin-Schouleur, M
Language :
English
Title :
Diagnostic strategy for identifying avian pathogenic Escherichia coli based on four patterns of virulence genes
Publication date :
2012
Journal title :
Journal of Clinical Microbiology
ISSN :
0095-1137
eISSN :
1098-660X
Publisher :
American Society for Microbiology (ASM), Washington, United States - District of Columbia
Antao EM, et al. 2009. Signature-tagged mutagenesis in a chicken infection model leads to the identification of a novel avian pathogenic Escherichia coli fimbrial adhesin. PLoS One 4:e7796.
Babai R, Blum-Oehler G, Stern BE, Hacker J, Ron EZ. 1997. Virulence patterns from septicemic Escherichia coli O78 strains. FEMS Microbiol. Lett. 149:99-105. (Pubitemid 27130164)
Barnes HJ, Vaillancourt J-P, Gross WB. 2003. Colibacillosis, p 631-652. In Saif YM, et al. (ed), Diseases of poultry, 11th ed. Iowa State University Press, Ames, IA.
Belanger L, et al. 2011. Escherichia coli from animal reservoirs as a potential source of human extraintestinal pathogenic E. coli. FEMS Immunol. Med. Microbiol. 62:1-10.
Blanco J, et al. 1992. Serogroups of Escherichia coli strains producing cytotoxic necrotizing factors CNF1 and CNF2. FEMS Microbiol. Lett. 75:155-159.
Blanco JE, Blanco M, Mora A, Blanco J. 1997. Production of toxins (enterotoxins, verotoxins, and necrotoxins) and colicins by Escherichia coli strains isolated from septicemic and healthy chickens: relationship with in vivo pathogenicity. J. Clin. Microbiol. 35:2953-2957. (Pubitemid 27452442)
Blanco JE, et al. 1998. Serotypes of Escherichia coli isolated from septicemic chickens in Galicia (northwest Spain). Vet. Microbiol. 61:229-235. (Pubitemid 28346219)
Blanco M, et al. 1996. Polymerase chain reaction for detection of Escherichia coli strains producing cytotoxic necrotizing factor type 1 and type 2 (CNF1 and CNF2). J. Microbiol. Methods 26:95-101. (Pubitemid 26246345)
Blanco M, et al. 1997. Genes coding for enterotoxins and verotoxins in porcine Escherichia coli strains belonging to different O:K:H serotypes: relationship with toxic phenotypes. J. Clin. Microbiol. 35:2958-2963. (Pubitemid 27452443)
Blattner FR, et al. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
Breiman L, Freidman J, Olsen R, Stone C. 1984. Classification and regression trees. Chapman and Hall, New-York, NY.
Chouikha I, et al. 2006. A selC-associated genomic island of the extraintestinal avian pathogenic Escherichia coli strain BEN2908 is involved in carbohydrate uptake and virulence. J. Bacteriol. 188:977-987. (Pubitemid 43146414)
Cortes MA, et al. 2008. Inactivation of ibeA and ibeT results in decreased expression of type 1 fimbriae in extraintestinal pathogenic Escherichia coli strain BEN2908. Infect. Immun. 76:4129-4136.
Dai J, et al. 2010. Suppression subtractive hybridization identifies an autotransporter adhesin gene of Escherichia coli IMT5155 specifically associated with avian pathogenic E. coli (APEC). BMC Microbiol. 10:236.
de Pace F, et al. 2010. The type VI secretion system plays a role in type 1 fimbria expression and pathogenesis of an avian pathogenic Escherichia coli strain. Infect. Immun. 78:4990-4998.
Dho M, Lafont JP. 1984. Adhesive properties and iron uptake ability in Escherichia coli lethal and nonlethal for chicks. Avian Dis. 28:1016-1025.
Dho M, Lafont JP. 1982. Escherichia coli colonization of the trachea in poultry: comparison of virulent and avirulent strains in gnotoxenic chickens. Avian Dis. 26:787-797.
Dho-Moulin M, Fairbrother JM. 1999. Avian pathogenic Escherichia coli (APEC). Vet. Res. 30:299-316. (Pubitemid 129587973)
Dho-Moulin M, et al. 1990. Surface antigens from Escherichia coli O2 and O78 strains of avian origin. Infect. Immun. 58:740-745. (Pubitemid 20072639)
Dozois CM, Daigle F, Curtiss R III. 2003. Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Proc. Natl. Acad. Sci. U. S. A. 100:247-252. (Pubitemid 36078060)
Dozois CM, et al. 2000. Relationship between the Tsh autotransporter and pathogenicity of avian Escherichia coli and localization and analysis of the Tsh genetic region. Infect. Immun. 68:4145-4154. (Pubitemid 30434569)
Dozois CM, Fairbrother JM, Harel J, Bosse M. 1992. pap- and pil-related DNA sequences and other virulence determinants associated with Escherichia coli isolated from septicemic chickens and turkeys. Infect. Immun. 60:2648-2656.
Dozois CM, Pourbakhsh SA, Fairbrother JM. 1995. Expression of P and type 1 (F1) fimbriae in pathogenic Escherichia coli from poultry. Vet. Microbiol. 45:297-309.
Dziva F, Stevens MP. 2008. Colibacillosis in poultry: unraveling the molecular basis of virulence of avian pathogenic Escherichia coli in their natural hosts. Avian Pathol. 37:355-366. (Pubitemid 352009253)
Ewers C, Antao EM, Diehl I, Philipp HC, Wieler LH. 2009. Intestine and environment of the chicken as reservoirs for extraintestinal pathogenic Escherichia coli strains with zoonotic potential. Appl. Environ. Microbiol. 75:184-192.
Ewers C, Janssen T, Kiessling S, Philipp HC, Wieler LH. 2004. Molecular epidemiology of avian pathogenic Escherichia coli (APEC) isolated from colisepticemia in poultry. Vet. Microbiol. 104:91-101. (Pubitemid 39458182)
Ewers C, Janssen T, Kiessling S, Philipp HC, Wieler LH. 2005. Rapid detection of virulence-associated genes in avian pathogenic Escherichia coli by multiplex polymerase chain reaction. Avian Dis. 49:269-273. (Pubitemid 40728415)
Germon P, et al. 2005. ibeA, a virulence factor of avian pathogenic Escherichia coli. Microbiology 151:1179-1186. (Pubitemid 40568013)
Hacker J, Knapp S, Goebel W. 1983. Spontaneous deletions and flanking regions of the chromosomally inherited hemolysin determinant of an Escherichia coli O6 strain. J. Bacteriol. 154:1145-1152. (Pubitemid 13099025)
Jerse AE, Martin WC, Galen JE, Kaper JB. 1990. Oligonucleotide probe for detection of the enteropathogenic Escherichia coli (EPEC) adherence factor of localized adherent EPEC. J. Clin. Microbiol. 28:2842-2844.
Johnson JR, Brown JJ. 1996. A novel multiply primed polymerase chain reaction assay for identification of variant papG genes encoding the Gal(α1-4)Gal-binding PapG adhesins of Escherichia coli. J. Infect. Dis. 173:920-926. (Pubitemid 26176016)
Johnson TJ, Siek KE, Johnson SJ, Nolan LK. 2006. DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains. J. Bacteriol. 188:745-758. (Pubitemid 43100561)
Johnson TJ, et al. 2008. Identification of minimal predictors of avian pathogenic Escherichia coli virulence for use as a rapid diagnostic tool. J. Clin. Microbiol. 46:3987-3996.
Kariyawasam S, Johnson TJ, Nolan LK. 2006. The pap operon of avian pathogenic Escherichia coli strain O1:K1 is located on a novel pathogenicity island. Infect. Immun. 74:744-749. (Pubitemid 43023132)
Kariyawasam S, Nolan LK. 2009. Pap mutant of avian pathogenic Escherichia coli O1, an O1:K1:H7 strain, is attenuated in vivo. Avian Dis. 53: 255-260.
La Ragione RM, Woodward MJ. 2002. Virulence factors of Escherichia coli serotypes associated with avian colisepticemia. Res. Vet. Sci. 73:27-35. (Pubitemid 35174507)
Le Bouguenec C, Archambaud M, Labigne A. 1992. Rapid and specific detection of the pap, afa, and sfa adhesin-encoding operons in uropathogenic Escherichia coli strains by polymerase chain reaction. J. Clin. Microbiol. 30:1189-1193.
Li G, et al. 2010. AatA is a novel autotransporter and virulence factor of avian pathogenic Escherichia coli. Infect. Immun. 78:898-906.
Lintermans P, et al. 1988. Isolation and nucleotide sequence of the F17-A gene encoding the structural protein of the F17 fimbriae in bovine entero-toxigenic Escherichia coli. Infect. Immun. 56:1475-1484.
Mellata M, et al. 2003. Role of virulence factors in resistance of avian pathogenic Escherichia coli to serum and in pathogenicity. Infect. Immun. 71:536-540. (Pubitemid 36026061)
Mellata M, Touchman JW, Curtiss R. 2009. Full sequence and comparative analysis of the plasmid pAPEC-1 of avian pathogenic E. coli chi7122 (O78:K80:H9). PLoS One 4:e4232.
Moriel DG, et al. 2010. Identification of protective and broadly conserved vaccine antigens from the genome of extraintestinal pathogenic Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 107:9072-9077.
Moulin-Schouleur M, et al. 2007. Extraintestinal pathogenic Escherichia coli strains of avian and human origin: link between phylogenetic relationships and common virulence patterns. J. Clin. Microbiol. 45:3366-3376. (Pubitemid 47585663)
O'Brien AD, LaVeck GD, Thompson MR, Formal SB. 1982. Production of Shigella dysenteriae type 1-like cytotoxin by Escherichia coli. J. Infect. Dis. 146:763-769. (Pubitemid 13211874)
Parreira VR, Gyles CL. 2003. A novel pathogenicity island integrated adjacent to the thrW tRNA gene of avian pathogenic Escherichia coli encodes a vacuolating autotransporter toxin. Infect. Immun. 71:5087-5096. (Pubitemid 37070751)
Pourbakhsh SA, et al. 1997. Dynamics of Escherichia coil infection in experimentally inoculated chickens. Avian Dis. 41:221-233. (Pubitemid 27153260)
Rodriguez-Siek KE, Giddings CW, Doetkott C, Johnson TJ, Nolan LK. 2005. Characterizing the APEC pathotype. Vet. Res. 36:241-256. (Pubitemid 40352602)
Rouquet G, et al. 2009. A metabolic operon in extraintestinal pathogenic Escherichia coli promotes fitness under stressful conditions and invasion of eukaryotic cells. J. Bacteriol. 191:4427-4440.
Sabri M, et al. 2008. Contribution of the SitABCD, MntH, and FeoB metal transporters to the virulence of avian pathogenic Escherichia coli O78 strain chi7122. Infect. Immun. 76:601-611. (Pubitemid 351251730)
Sabri M, Leveille S, Dozois CM. 2006. A SitABCD homologue from an avian pathogenic Escherichia coli strain mediates transport of iron and manganese and resistance to hydrogen peroxide. Microbiology 152:745-758.
Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
Schouler C, Koffmann F, Amory C, Leroy-Setrin S, Moulin-Schouleur M. 2004. Genomic subtraction for the identification of putative new virulence factors of an avian pathogenic Escherichia coli strain of O2 serogroup. Microbiology 150:2973-2984. (Pubitemid 39317798)
Scott DA, Kaper JB. 1994. Cloning and sequencing of the genes encoding Escherichia coli cytolethal distending toxin. Infect. Immun. 62:244-251. (Pubitemid 24011966)
Shrivastava S, Mande SS. 2008. Identification and functional characterization of gene components of type VI secretion system in bacterial genomes. PLoS One 3:e2955.
Skyberg JA, et al. 2003. Characterizing avian Escherichia coli isolates with multiplex polymerase chain reaction. Avian Dis. 47:1441-1447. (Pubitemid 37545801)
Stordeur P, et al. 2002. Examination of Escherichia coli from poultry for selected adhesin genes important in disease caused by mammalian pathogenic E. coli. Vet. Microbiol. 84:231-241. (Pubitemid 33135547)
Tanner L, et al. 2008. Decision tree algorithms predict the diagnosis and outcome of dengue fever in the early phase of illness. PLoS Negl. Trop. Dis. 2:e196.
Therneau TM, Atkinson B, Ripley BR. 2009. rpart: recursive partitioning, R package, version 3.1-42. http://CRAN.R-project.org/package=rpart.
Toth I, Herault F, Beutin L, Oswald E. 2003. Production of cytolethal distending toxins by pathogenic Escherichia coli strains isolated from human and animal sources: establishment of the existence of a new cdt variant (type IV). J. Clin. Microbiol. 41:4285-4291. (Pubitemid 37099697)
van den Bosch JF, et al. 1993. Identification of F11 fimbriae on chicken Escherichia coli strains. Infect. Immun. 61:800-806.
Williams PH. 1979. Novel iron uptake system specified by ColV plasmids: an important component in the virulence of invasive strains of Escherichia coli. Infect. Immun. 26:925-932. (Pubitemid 10212948)
