J.W. Deming Psychrophiles and polar regions Curr. Opin. Microbiol. 5 2002 301 309 (Pubitemid 34614943)
K. Takai, K. Nakamura, T. Toki, U. Tsunogai, M. Miyazaki, J. Miyazaki, H. Hirayama, S. Nakagawa, T. Nunoura, and K. Horikoshi Cell proliferation at 122 degrees C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation Proc. Natl. Acad. Sci. U.S.A. 105 2008 10949 10954
C. Gerday, and N. Glansdorff Physiology and Biochemistry of Extremophiles 2007 ASM Press Washington, D.C
K. Horikoshi, G. Antranikian, A.T. Bull, F.T. Robb, and K.O. Stetter Extremophiles Handbook 2011 Springer Verlag Tokyo, Berlin, Heidelberg
B. Boussau, S. Blanquart, A. Necsulea, N. Lartillot, and M. Gouy Parallel adaptations to high temperatures in the Archaean eon Nature 456 2008 942 945
K.A. Maher, and D.J. Stevenson Impact frustration of the origin of life Nature 331 1988 612 614
M. Di Giulio The universal ancestor and the ancestor of bacteria were hyperthermophiles J. Mol. Evol. 57 2003 721 730 (Pubitemid 37543986)
M. Levy, and S.L. Miller The stability of the RNA bases: implications for the origin of life Proc. Natl. Acad. Sci. U.S.A. 95 1998 7933 7938 (Pubitemid 28326044)
J. Attwater, A. Wochner, V.B. Pinheiro, A. Coulson, and P. Holliger Ice as a protocellular medium for RNA replication Nat. Commun. 1 2010 76 10.1038/ncomms1076
C. Vieille, and G.J. Zeikus Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability Microbiol. Mol. Biol. Rev. 65 2001 1 43 (Pubitemid 32204286)
G. Feller, and C. Gerday Psychrophilic enzymes: hot topics in cold adaptation Nat. Rev. Microbiol. 1 2003 200 208
G.S. Bell, R.J. Russell, H. Connaris, D.W. Hough, M.J. Danson, and G.L. Taylor Stepwise adaptations of citrate synthase to survival at life's extremes. From psychrophile to hyperthermophile Eur. J. Biochem. 269 2002 6250 6260 (Pubitemid 35461838)
D. Georlette, B. Damien, V. Blaise, E. Depiereux, V.N. Uversky, C. Gerday, and G. Feller Structural and functional adaptations to extreme temperatures in psychrophilic, mesophilic, and thermophilic DNA ligases J. Biol. Chem. 278 2003 37015 37023 (Pubitemid 37175215)
E. Bae, and G.N. Phillips Jr. Structures and analysis of highly homologous psychrophilic, mesophilic, and thermophilic adenylate kinases J. Biol. Chem. 279 2004 28202 28208 (Pubitemid 38900096)
A. Linden, and M. Wilmanns Adaptation of class-13 alpha-amylases to diverse living conditions ChemBioChem 5 2004 231 239 (Pubitemid 39256238)
N. Coquelle, E. Fioravanti, M. Weik, F. Vellieux, and D. Madern Activity, stability and structural studies of lactate dehydrogenases adapted to extreme thermal environments J. Mol. Biol. 374 2007 547 562 (Pubitemid 350007659)
B.L. Cantarel, P.M. Coutinho, C. Rancurel, T. Bernard, V. Lombard, and B. Henrissat The carbohydrate-active EnZymes database (CAZy): an expert resource for Glycogenomics Nucleic Acids Res. 37 2009 D233 D238
S. Janecek Alpha-Amylase family: molecular biology and evolution Prog. Biophys. Mol. Biol. 67 1997 67 97 (Pubitemid 27491749)
S. Janecek Sequence similarities and evolutionary relationships of microbial, plant and animal alpha-amylases Eur. J. Biochem. 224 1994 519 524 (Pubitemid 24282835)
S. D'Amico, C. Gerday, and G. Feller Structural similarities and evolutionary relationships in chloride-dependent alpha-amylases Gene 253 2000 95 105 (Pubitemid 30488890)
J.L. Da Lage, G. Feller, and S. Janecek Horizontal gene transfer from Eukarya to bacteria and domain shuffling: the alpha-amylase model Cell. Mol. Life Sci. 61 2004 97 109 (Pubitemid 38121903)
J.L. Da Lage, E.G. Danchin, and D. Casane Where do animal alpha-amylases come from? An interkingdom trip FEBS Lett. 581 2007 3927 3935 (Pubitemid 47212096)
G. Feller, O. Bussy, C. Houssier, and C. Gerday Structural and functional aspects of chloride binding to Alteromonas haloplanctis alpha-amylase J. Biol. Chem. 271 1996 23836 23841 (Pubitemid 26327356)
M. Qian, H. Ajandouz el, F. Payan, and V. Nahoum Molecular basis of the effects of chloride ion on the acid-base catalyst in the mechanism of pancreatic alpha-amylase Biochemistry 44 2005 3194 3201 (Pubitemid 40321992)
R. Maurus, A. Begum, L.K. Williams, J.R. Fredriksen, R. Zhang, S.G. Withers, and G.D. Brayer Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity Biochemistry 47 2008 3332 3344 (Pubitemid 351399222)
N. Aghajari, G. Feller, C. Gerday, and R. Haser Structures of the psychrophilic Alteromonas haloplanctis α-amylase give insights into cold adaptation at a molecular level Structure 6 1998 1503 1516 (Pubitemid 29000528)
S. D'Amico, C. Gerday, and G. Feller Structural determinants of cold adaptation and stability in a large protein J. Biol. Chem. 276 2001 25791 25796
S. D'Amico, C. Gerday, and G. Feller Temperature adaptation of proteins: engineering mesophilic-like activity and stability in a cold-adapted alpha-amylase J. Mol. Biol. 332 2003 981 988 (Pubitemid 37108792)
S. D'Amico, J.S. Sohier, and G. Feller Kinetics and energetics of ligand binding determined by microcalorimetry: insights into active site mobility in a psychrophilic alpha-amylase J. Mol. Biol. 358 2006 1296 1304
A. Cipolla, S. D'Amico, R. Barumandzadeh, A. Matagne, and G. Feller Stepwise adaptations to low temperature as revealed by multiple mutants of psychrophilic alpha-amylase from Antarctic Bacterium J. Biol. Chem. 286 2011 38348 38355
K.S. Siddiqui, and R. Cavicchioli Cold-adapted enzymes Annu. Rev. Biochem. 75 2006 403 433 (Pubitemid 44118038)
G. Feller, D. d'Amico, and C. Gerday Thermodynamic stability of a cold-active α-amylase from the Antarctic bacterium Alteromonas haloplanctis Biochemistry 38 1999 4613 4619
M. Schramm, and A. Loyter Purification of alpha-amylases by precipitation of amylase-glycogen complexes Methods Enzymol. 8 1966 533 537
T. Lonhienne, C. Gerday, and G. Feller Psychrophilic enzymes: revisiting the thermodynamic parameters of activation may explain local flexibility Biochim. Biophys. Acta 1543 2000 1 10
S. D'Amico, and G. Feller A nondetergent sulfobetaine improves protein unfolding reversibility in microcalorimetric studies Anal. Biochem. 385 2009 389 391
A. Matouschek, J.M. Matthews, C.M. Johnson, and A.R. Fersht Extrapolation to water of kinetic and equilibrium data for the unfolding of barnase in urea solutions Protein Eng. 7 1994 1089 1095 (Pubitemid 24282494)
C.N. Pace Determination and analysis of urea and guanidine hydrochloride denaturation curves Methods Enzymol. 131 1986 266 280 (Pubitemid 16002205)
S. D'Amico, J.C. Marx, C. Gerday, and G. Feller Activity-stability relationships in extremophilic enzymes J. Biol. Chem. 278 2003 7891 7896 (Pubitemid 36800524)
A. Lykidis, K. Mavromatis, N. Ivanova, I. Anderson, M. Land, G. DiBartolo, M. Martinez, A. Lapidus, S. Lucas, A. Copeland, P. Richardson, D.B. Wilson, and N. Kyrpides Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX J. Bacteriol. 189 2007 2477 2486 (Pubitemid 46411362)
G. Feller, F. Payan, F. Theys, M. Qian, R. Haser, and C. Gerday Stability and structural analysis of α-amylase from the Antarctic psychrophile Alteromonas haloplanctis A23 Eur. J. Biochem. 222 1994 441 447 (Pubitemid 24204913)
G. Feller Protein stability and enzyme activity at extreme biological temperatures J. Phys.-Condens. Mat. 22 2010 10.1088/0953-8984/1022/1032/323101
G.N. Somero Proteins and temperature Annu. Rev. Physiol. 57 1995 43 68
P.A. Fields, and G.N. Somero Hot spots in cold adaptation: localized increases in conformational flexibility in lactate dehydrogenase A(4) orthologs of Antarctic notothenioid fishes Proc. Natl. Acad. Sci. U.S.A. 95 1998 11476 11481 (Pubitemid 28450154)
N. Aghajari, M. Roth, and R. Haser Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase Biochemistry 41 2002 4273 4280 (Pubitemid 34259870)
C.H. Yang, and W.H. Liu Cloning and characterization of a maltotriose-producing alpha-amylase gene from Thermobifida fusca J. Ind. Microbiol. Biotechnol. 34 2007 325 330
S. Robic, M. Guzman-Casado, J.M. Sanchez-Ruiz, and S. Marqusee Role of residual structure in the unfolded state of a thermophilic protein Proc. Natl. Acad.Sci. U.S.A. 100 2003 11345 11349 (Pubitemid 37205937)
P.L. Privalov Stability of proteins: small globular proteins Adv. Protein Chem. 33 1979 167 241
S. Kumar, C.J. Tsai, and R. Nussinov Maximal stabilities of reversible two-state proteins Biochemistry 41 2002 5359 5374 (Pubitemid 34429370)
P.L. Wintrode, and F.H. Arnold Temperature adaptation of enzymes: lessons from laboratory evolution Adv. Protein Chem. 55 2000 161 225 (Pubitemid 33717335)
P.L. Privalov Stability of proteins. Proteins which do not present a single cooperative system Adv. Protein Chem. 35 1982 1 104
P. Zavodszky, J. Kardos, A. Svingor, and G.A. Petsko Adjustment of conformational flexibility is a key event in the thermal adaptation of proteins Proc. Natl. Acad. Sci. U.S.A. 95 1998 7406 7411 (Pubitemid 28293265)
M. Tehei, B. Franzetti, D. Madern, M. Ginzburg, B.Z. Ginzburg, M.T. Giudici-Orticoni, M. Bruschi, and G. Zaccai Adaptation to extreme environments: macromolecular dynamics in bacteria compared in vivo by neutron scattering EMBO Rep. 5 2004 66 70 (Pubitemid 38228530)
M. Tehei, D. Madern, B. Franzetti, and G. Zaccai Neutron scattering reveals the dynamic basis of protein adaptation to extreme temperature J. Biol. Chem. 280 2005 40974 40979 (Pubitemid 41780592)
J.D. Bloom, and F.H. Arnold In the light of directed evolution: pathways of adaptive protein evolution Proc. Natl. Acad. Sci. U. S. A 106 2009 9995 10000
J. Jeon, H.J. Nam, Y.S. Choi, J.S. Yang, J. Hwang, and S. Kim Molecular evolution of protein conformational changes revealed by a network of evolutionarily coupled residues Mol. Biol. Evol. 28 2011 2675 2685
J.P. Colletier, A. Aleksandrov, N. Coquelle, S. Mraihi, E. Mendoza-Barbera, M. Field, and D. Madern Sampling the conformational energy landscape of a hyperthermophilic protein by engineering key substitutions Mol. Biol. Evol. 2012 10.1093/molbev/mss015
A. Levitzki, and M.L. Steer The allosteric activation of mammalian alpha-amylase by chloride Eur. J. Biochem. 41 1974 171 180
