Bessonov, K., Harauz, G., & Vassall, K. (2017). Docking and molecular dynamics simulations of the Fyn-SH3 domain with free and phospholipid bilayer-associated 18.5-kDa myelin basic protein (MBP) – Insights into a non-canonical and fuzzy interaction. Proteins. doi:10.1002/prot.25295 Peer Reviewed verified by ORBi |
Bessonov, K., Gadaleta, F., & Van Steen, K. (2017). Integration of Gene Expression and Methylation to unravel Biological Networks in Glioblastoma Patients. Genetic Epidemiology. doi:10.1002/gepi.22028 Peer Reviewed verified by ORBi |
Bessonov, K., & Van Steen, K. (2016). Practical aspects of gene regulatory inference via conditional inference forests from expression data. Genetic Epidemiology. doi:10.1002/gepi.22017 Peer Reviewed verified by ORBi |
Bessonov, K. (2016). From Statistical to Biological Interactions via Omics Integration [Doctoral thesis, ULiège - Université de Liège]. ORBi-University of Liège. https://orbi.uliege.be/handle/2268/199583 |
Fouladi, R., Bessonov, K., Van Lishout, F., & Van Steen, K. (July 2015). Model-Based Multifactor Dimensionality Reduction for Rare Variant Association Analysis. Human Heredity, 79, 157-167. doi:10.1159/000381286 Peer Reviewed verified by ORBi |
Bessonov, K., Gusareva, E., & Van Steen, K. (2015). A cautionary note on the impact of protocol changes for Genome-Wide Association SNP x SNP Interaction studies: an example on ankylosing spondylitis. Human Genetics. doi:10.1007/s00439-015-1560-7 Peer Reviewed verified by ORBi |
Pineda San Juan, S., Gómez-Rubio, P., Antoni, P., Bessonov, K., Márquez, M., Kogevinas, M., Real, F., Van Steen, K., & Malats, N. (2015). Framework for the integration of genomics, epigenomics, and transcriptomics in complex diseases. Human Heredity. Peer Reviewed verified by ORBi |
Bollen, L., Vande Casteele, N., Peeters, M., Bessonov, K., Van Steen, K., Rutgeerts, P., Ferrante, M., Hoylaerts, M. F., Vermeire, S., & Gils, A. (2015). Short-term Effect of Infliximab Is Reflected in the Clot Lysis Profile of Patients with Inflammatory Bowel Disease: A Prospective Study. Inflammatory Bowel Diseases, 21 (3), 570-8. doi:10.1097/MIB.0000000000000301 Peer Reviewed verified by ORBi |
Pineda, S., Gomez-Rubio, P., Picornell, A., Bessonov, K., Marquez, M., Kogevinas, M., Real, F. X., Van Steen, K., & Malats, N. (2015). Framework for the Integration of Genomics, Epigenomics and Transcriptomics in Complex Diseases. Human Heredity, 79 (3-4), 124-36. doi:10.1159/000381184 Peer Reviewed verified by ORBi |
Bessonov, K. (28 August 2014). Gene Regulatory Network Inference via Conditional Inference Trees and Forests [Poster presentation]. 23rd Annual Conference of International Genetic Epidemiology society (IGES2014). |
Gusareva, E., Carrasquillo, M. M., Bellenguez, C., Cuyvers, E., Colon, S., Graff-Radford, N. R., Petersen, R. C., Dickson, D. W., Mahachie John, J., Bessonov, K., Van Broeckhoven, C., Harold, D., Williams, J., Amouyel, P., Sleegers, K., Ertekin-Taner, N., Lambert, J.-C., & Van Steen, K. (2014). Genome-Wide Association Interaction Analysis for Alzheimer’s Disease. Neurobiology of Aging. doi:10.1016/j.neurobiolaging.2014.05.014 Peer Reviewed verified by ORBi |
Bessonov, K. (2014). On collaboration and competition in scientific community [Paper presentation]. Departmental meeting of PhD students, Liege, Belgium. |
Gusareva, E., Bellenguez, C., Cuyvers, E., Colon, S., Carrasquillo, M., Graff-Radford, N., Petersen, R., Dickson, D., Younkin, S., Mahachie John, J., Bessonov, K., Van Broeckhoven, C., Harold, D., Williams, J., Amouyel, P., Sleegers, K., Ertekin-Taner, N., Lambert, J.-C., & Van Steen, K. (27 January 2014). Genome-wide association interaction analysis for Alzheimer’s disease [Poster presentation]. GIGA-DAY 2014, Liege, Belgium. |
Bessonov, K. (2013). Sequence Alignment Practical. (ULiège - Université de Liège, GBIO0009-1). |
Van Lishout, F., Bessonov, K., Duan, Q., Gusareva, E., Mahachie John, J., Tantishira, K., & Van Steen, K. (25 October 2013). Genome-wide environmental interaction analysis using multidimensional data reduction principles to identify asthma pharmacogenetic loci in relation to corticosteroid therapy [Poster presentation]. Annual Society of Human Genetics Annual Meeting 2013, Boston, United States. |
Gusareva, E., Bellenguez, C., Cuyvers, E., Colon, S., Carrasquillo, M., Graff-Radford, N., Petersen, R., Dickson, D., Younkin, S., Mahachie John, J., Bessonov, K., Van Broeckhoven, C., Harold, D., Williams, J., Amouyel, P., Sleegers, K., Ertekin-Taner, N., Lambert, J.-C., & Van Steen, K. (2013). Genome-wide association interaction analysis for Alzheimer’s disease [Paper presentation]. The 14th International Meeting on Human Genome Variation and Complex Genome Analysis (HGV2013), Seoul, South Korea. |
Bessonov, K. (22 October 2013). Identification of asthma-related trans-acting epistatic eQTLs using Model-Based Multifactor Dimensionality Reduction (MB-MDR) [Poster presentation]. American Society of Human Genetics 2013, Boston, United States. |
Bessonov, K., & Van Steen, K. (17 September 2013). Replication of large-scale epistasis studies: an example on ankylosing spondylitis [Poster presentation]. International Genetic Epidemiology Society (IGES) 2013, Chicago, United States. |
Bessonov, K. (2013). Bioinformatics opportunities in Genomics and Genetics [Paper presentation]. Departamental Talk, Liege, Belgium. |
Bessonov, K. (29 April 2013). A comparative Genome-Wide Association Interaction study using BOOST and MB-MDR algorithms on Ankylosing Spondylitis [Poster presentation]. Bio-IT World Conference & Expo 2013, Boston, United States. |
Bessonov, K., Vassall, K. A., & Harauz, G. (2013). Parameterization of the proline analogue Aze (azetidine-2-carboxylic acid) for molecular dynamics simulations and evaluation of its effect on homo-pentapeptide conformations. Journal of Molecular Graphics and Modelling, 39, 118-25. doi:10.1016/j.jmgm.2012.11.006 Peer Reviewed verified by ORBi |
Leitch, J. J., Brosseau, C. L., Roscoe, S. G., Bessonov, K., Dutcher, J. R., & Lipkowski, J. (2013). Electrochemical and PM-IRRAS characterization of cholera toxin binding at a model biological membrane. Langmuir, 29 (3), 965-76. doi:10.1021/la304939k Peer Reviewed verified by ORBi |
Ahmed, M. A. M., De Avila, M., Polverini, E., Bessonov, K., Bamm, V. V., & Harauz, G. (2012). Solution Nuclear Magnetic Resonance Structure and Molecular Dynamics Simulations of a Murine 18.5 kDa Myelin Basic Protein Segment (S72-S107) in Association with Dodecylphosphocholine Micelles. Biochemistry, 51 (38), 7475-87. doi:10.1021/bi300998x Peer Reviewed verified by ORBi |
Antonie, L., & Bessonov, K. (2012). Biologically relevant association rules for classification of microarray data. ACM SIGAPP Applied Computing Review, 12 (1), 12-23. doi:10.1145/2188379.2188381 Peer reviewed |
Antonie, L., & Bessonov, K. (2011). Classifying microarray data with association rules. In Proceedings of the 2011 ACM Symposium on Applied Computing (pp. 94-99). New York, United States - New York: ACM. doi:10.1145/1982185.1982209 Peer reviewed |
Bessonov, K., Chiu, D. K. Y., & van der Merwe, G. (2010). Association network modeling from microarray data around fermentation stress response gene NSF1 (YPL230W) using significantly co-expressed gene set. In Bioinformatics and Biomedicine Workshops (BIBMW), 2010 IEEE International Conference on. doi:10.1109/BIBMW.2010.5703769 Peer reviewed |
Bessonov, K. (May 2010). In silico study of the interaction of the Myelin Basic Protein C-terminal a-helical peptide with DMPC and mixed DMPC/DMPE lipid bilayers [Paper presentation]. 5th Canadian Student Conference on Biomedical Computing and Engineering, Waterloo, Canada. |
Homchaudhuri, L., De Avila, M., Nilsson, S. B., Bessonov, K., Smith, G. S. T., Bamm, V. V., Musse, A. A., Harauz, G., & Boggs, J. M. (2010). Secondary structure and solvent accessibility of a calmodulin-binding C-terminal segment of membrane-associated myelin basic protein. Biochemistry, 49 (41), 8955-66. doi:10.1021/bi100988p Peer Reviewed verified by ORBi |
Bessonov, K., Bamm, V. V., & Harauz, G. (2010). Misincorporation of the proline homologue Aze (azetidine-2-carboxylic acid) into recombinant myelin basic protein. Phytochemistry, 71 (5-6), 502-7. doi:10.1016/j.phytochem.2009.12.010 Peer Reviewed verified by ORBi |
Berg, L., Koch, T., Heerkens, T., Bessonov, K., Thomsen, P., & Betts, D. (2009). Chondrogenic potential of mesenchymal stromal cells derived from equine bone marrow and umbilical cord blood. Veterinary and Comparative Orthopaedics and Traumatology, 22 (5), 363-70. doi:10.3415/VCOT-08-10-0107 Peer Reviewed verified by ORBi |