Article (Scientific journals)
Comparing genetic architecture of mid-infrared-predicted energy balance, a novel energy deficiency score, and several biomarkers.
Hu, Hongqing; Franceschini, Sébastien; Lemal, Pauline et al.
2025In Journal of Dairy Science
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Keywords :
genetic architecture; genomic correlation; independent contribution
Abstract :
[en] Negative energy balance (NEB) during early lactation is a critical physiological challenge in high-producing dairy cows, affecting both their health and production performance. The objectives of this study were: (1) to compare the genetic architecture of logit-transformed predicted NEB (LPNEB), a logit-transformed novel energy deficiency score (LEDS), 15 biomarkers, and 3 production traits using SNP-based genomic correlation analysis; (2) to extend this study to a chromosomal level to identify specific genomic regions involved in the regulation of energy metabolism; and (3) to compare the independent contributions of 8 traits to the underlying genetic architecture of LPNEB and LEDS. The SNP effects estimated from single-trait models can be used to quickly calculate genomic correlations for 20 traits. The results indicate strong genomic correlations between LPNEB and LEDS, as well as with key metabolic biomarkers, particularly blood nonesterified fatty acids (NEFA), highlighting their importance in energy metabolism. Furthermore, NEFA was a strong independent contributor to both LPNEB and LEDS. Chromosome regions located on BTA19 and BTA25 were identified as potentially associated with NEB. By combining genomic correlation and contribution analyses, this study provides valuable insights into the genetic basis of NEB and related traits in dairy cows.
Disciplines :
Zoology
Author, co-author :
Hu, Hongqing ;  Université de Liège - ULiège > TERRA Research Centre
Franceschini, Sébastien  ;  Université de Liège - ULiège > TERRA Research Centre
Lemal, Pauline  ;  Université de Liège - ULiège > TERRA Research Centre
Atashi, Hadi  ;  Université de Liège - ULiège > Département GxABT > Animal Sciences (AS)
Grelet, Clément;  Walloon Agricultural Research Center (CRA-W), 5030 Gembloux, Belgium
Chen, Yansen  ;  Université de Liège - ULiège > Département GxABT > Animal Sciences (AS)
Wijnrocx, Katrien  ;  Université de Liège - ULiège > Département GxABT > Animal Sciences (AS)
Hélène, Soyeurt;  TERRA Teaching and Research Center, Gembloux Agro-Bio Tech (ULiège-GxABT), University of Liège, 5030 Gembloux, Belgium
Gengler, Nicolas  ;  Université de Liège - ULiège > Département GxABT > Animal Sciences (AS)
Language :
English
Title :
Comparing genetic architecture of mid-infrared-predicted energy balance, a novel energy deficiency score, and several biomarkers.
Publication date :
18 September 2025
Journal title :
Journal of Dairy Science
ISSN :
0022-0302
eISSN :
1525-3198
Publisher :
American Dairy Science Association, United States
Peer reviewed :
Peer Reviewed verified by ORBi
Funders :
CSC - China Scholarship Council
ULiège - Université de Liège
F.R.S.-FNRS - Fonds de la Recherche Scientifique
Available on ORBi :
since 23 October 2025

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