Ren, L.; Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China
Jin, X.; Hebei Technology Innovation Center for Green Management of Soil-borne Diseases Baoding University, Baoding, Hebei 071000, China
Fang, W.; Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China
Yan, D.; Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China, Beijing Innovation Consortium of Agriculture Research System, Beijing, 100029, China
Li, Yuan
Wang, Q.; Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China, Beijing Innovation Consortium of Agriculture Research System, Beijing, 100029, China
Cao, A.; Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China, Beijing Innovation Consortium of Agriculture Research System, Beijing, 100029, China
Language :
English
Title :
Organic fertilizer activates soil beneficial microorganisms to promote strawberry growth and soil health after fumigation
Publication date :
2022
Journal title :
Environmental Pollution
ISSN :
0269-7491
eISSN :
1873-6424
Publisher :
Elsevier, Barking, United Kingdom
Volume :
295
Pages :
118653
Peer reviewed :
Peer Reviewed verified by ORBi
Funders :
National Key Research and Development Program of China, NKRDPC
Adams, R.I., Miletto, M., Taylor, J.W., Bruns, T.D., Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances. ISME J. 7:7 (2013), 1262–1273.
Anusha, T., Maraike, P., Iuliia, K., Franco, B., Ursula, P., High-throughput volatilome fingerprint using PTR-ToF-MS shows species-specific patterns in Mortierella and closely related genera. J. Fungi, 7(1), 2021, 10.3390/JOF7010066.
Baldock, J.A., Role of the soil matrix and minerals in protecting natural organic materials against biological attack. Org. Geochem. 31:7 (2000), 697–710.
Bauld, J., Brock, T.D., Ecological studies of Chloroflexis, a gliding photosynthetic bacterium. Arch. Microbiol. 92:4 (1973), 267–284.
Cao, A.C., Liu, X.M., Guo, M.X., Wang, Q.X., Li, Y., Ouyang, C.B., Yan, D.D., Incidences of soil-borne diseases and control measures. Plant Prot. 43:2 (2017), 6–16.
Cao, Y., Song, X.C., Guo, D.J., Wang, Q.J., Ma, Y., Shen, Q.R., Prevention and control of watermelon Fusarium wilt by dazomet fumigation combined with bio-organic fertilizer. Soils 50:1 (2018), 93–100.
Chen, J.G., Zhang, Y.Z., Zeng, X.B., Zhou, W.J., Tan, Z.J., Jiang, D.S., Effects of different fertilizations on soil microbial characteristics in a paddy soil from red erath with long-term K-deficiency. Plant Nutr. Fert. Sci. 14:6 (2008), 1200–1205.
Chen, H.J., Zhao, S., Zhao, J.M., Zhang, K.K., Jiang, J., Guan, Z.Y., Chen, S.M., Chen, F.D., Fang, W.M., Deep tillage combined with biofertilizer following soil fumigation improved chrysanthemum growth by regulating the soil microbiome. MicrobiologyOpen, 7(9), 2020, 10.1002/mbo3.1045.
Cheng, H.Y., Zhang, D.Q., Huang, B., Song, Z.X., Ren, L.R., Hao, B.Q., Liu, J., Zhu, J.H., Fang, W.S., Yan, D.D., Li, Y., Wang, Q.X., Cao, A.C., Organic fertilizer improves soil fertility and restores the bacterial community after 1,3-dichloropropene fumigation. Sci. Total Environ., 738, 2020, 140345.
Chi, Y.J., Yang, Q., Biological control of plant diseases with Chaetomium spp. and the problems in its application. Syst. Sci. Comprehen. Stud. Agric. 18:3 (2002), 215–218.
Coskun, D., Britto, D.T., Huynh, W.Q., Kronzucker, H.J., The role of silicon in higher plants under salinity and drought stress. Front. Plant Sci., 7, 2016, 1072.
Deepanjan, M., Ishita, P., Ayan, D., Iravati, R., Antara, D., Madhurima, J., Roy, C.N., Bhanu Singh, B.P., Tarit, R., Rice seed (IR64) priming with potassium humate for improvement of seed germination, seedling growth and antioxidant defense system under arsenic stress. Ecotoxicol. Environ. Saf., 219, 2021, 10.1016/J.ECOENV.2021.112313.
Edgar, R.C., Haas, B.J., Clemente, J.C., Quince, C., Knight, R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27 (2011), 2194–2200.
Fang, W.S., Song, Z.X., Tao, S., Zhang, D.Q., Huang, B., Ren, L.R., Cheng, H.Y., Yan, D.D., Li, Y., Cao, A.C., Wang, Q.X., Biochar mitigates the negative effect of chloropicrin fumigation on beneficial soil microorganisms. Sci. Total Environ., 738, 2020, 139880.
Hollister, E.B., Hu, P., Wang, A.S., Hons, F.M., Gentry, T.J., Differential impacts of brassicaceous and nonbrassicaceous oilseed meals on soil bacterial and fungal communities. FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol. 83:3 (2013), 632–641.
Huang, B., Wang, Q., Guo, M.X., Fang, W.S., Wang, X.N., Wang, Q.X., Yan, D.D., Ouyang, C.B., Li, Y., Cao, A.C., The synergistic advantage of combining chloropicrin or dazomet with fosthiazate nematicide to control root-knot nematode in cucumber production. J. Integr. Agric. 18 (2019), 2093–2106.
Imfeld, G., Vuilleumier, S., Measuring the effects of pesticides on bacterialcommunities in soil: a critical review. Eur. J. Soil Biol. 49 (2012), 22–30.
Ingram, L.J., Schuman, G.E., Stahl, P.D., Spackman, L.K., Microbial respiration and organic carbon indicate nutrient cycling recovery in reclaimed soils. Soil Sci. Soc. Am. J. 69:6 (2005), 1737–1745.
Janvier, C., Villeneuve, F., Alabouvette, C., Edelhermann, V., Mateille, T., Steinberg, C., Soil health through soil disease suppression: which strategy from descriptors to indicators?. Soil Biol. Biochem. 39 (2007), 1–23.
Jia, X.X., Shi, G.Y., Lv, H.L., Li, Y.J., Huang, W., Zhang, L.P., Soil biochemical effects of soil fumigation and bio-organic fertilizer combined to alleviate the problem of greenhouse eggplant in a continuous cropping system. J. Gansu Agric. Univ. 54:3 (2019), 84–92.
Joelle, T., Estelle-Laura, L.Y., Douro-Kobi, K.O., Karim, Z., Josky, A., Yasmine, G., Augustin, K., Appolinaire, A., Endophytic colonization of tomato plants by Beauveria bassiana Vuillemin (Ascomycota: hypocreales) and leaf damage in Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) larvae. Egypt. J. Biol. Pest Contr. 31:1 (2021), 3–9.
Kolde, R., Pheatmap: Pretty Heatmaps. R Package. 2015 http://cran.r-project.org/web/647packages/pheatmap/index.html, Version 1.0.8.
Komada, H., Development of a selective medium for quantitative isolation of Fusarium oxysporum from natural soil. Rev. Plant Prot. Res. 8 (1975), 114–125.
Kumar, D., Singh, A.P., Raha, P., Rakshit, A., Singh, C.M., Kishor, P., Potassium humate: a potential soil conditioner and plant growth promoter. Int. J. Agric. Environ. Biotechnol. 6:3 (2013), 441–446.
Lazcano, C., Boyd, E., Holmes, G., Hewavitharana, S., Pasulka, A., Ivors, K., The rhizosphere microbiome plays a role in the resistance to soil-borne pathogens and nutrient uptake of strawberry cultivars under field conditions. Sci. Rep., 11(1), 2021, 3188.
Li, Q.J., Fang, W.S., Yan, D.D., Wang, Q.X., Cao, A.C., Research progress on the effect of fumigants on soil microorganisms. Chin. J. Pesticide Sci. 21:5–6 (2019), 780–786.
Li, Q.J., Zhu, J.H., Wu, J.J., Jin, X., Li, Y., Yan, D.D., Wang, Q.X., Cao, A.C., Pathogen identification and indoor virulence determination of strawberry root rot in Baoding of Hebei. J. Hebei Agric. Univ. 44:2 (2021), 15–20.
Li, X., Liu, Y.X., Lu, N., Cai, L.T., Yuan, YoB., Shi, J.X., Integrated bio-control of tobacco bacterial wilt and its effect on soil microobial community structure. Acta Pedol. Sin. 54:1 (2017), 216–226.
Lin, Z.L., Zhang, H., Luo, J., Gao, S.W., Yao, J.L., Xu, L.P., Effect of silicon fertilizer on sugarcane production and its resistance to stalk borer. Chin. J. Top. Crops 42:4 (2021), 1071–1079.
Locascio, S.J., Dickson, D.W., Mitchell, D.J., Olson, S.M., Gilreath, J.P., Noling, J.W., Alternative treatments to methyl bromide for strawberry. Proc. Fla. State Hortic. Soc. 112 (2014), 297–302.
Magoc, T., Salzberg, S.L., FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27 (2011), 2957–2963.
Mao, L.G., Wang, Q.X., Yan, D.D., Ma, T.T., Liu, P.F., Shen, J., Li, Y., Ouyang, C.B., Guo, M.X., Cao, A.C., Evaluation of chloropicrin as a soil fumigant against Ralstonia solanacarum in ginger (Zingiber officinale rosc.) production in China. PLoS One, 9(3), 2014, 91767.
Masago, H., Yoshikawa, M., Fukada, M., Nakanishi, N., Selective inhibition of pythium spp. on a medium for direct isolation of phytophthora spp. from soils and plants. Phytopathology 77:3 (1977), 425–428.
Mehrabi, Z., McMillan, V.E., Clark, I.M., Canning, G., Hammond-Kosack, K.E., Preston, G., Hirsch, P.R., Mauchline, T.H., Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen. Sci. Rep., 6, 2016, 29905.
Meng, T.Z., Guo, D.J., Wang, G.F., Ma, Y., Effect of combination of soil disinfestation and bioorganic fertilizer application on improving watermelon diseased soil. Soils 52:3 (2020), 494–502.
Nicola, L., Turco, E., Albanese, D., Donati, C., Thalheimer, M., Pindo, M., Insam, H., Cavalieri, D., Pertot, I., Fumigation with dazomet modifies soil microbiota in apple orchards affected by replant disease. Appl. Soil Ecol. 113 (2017), 71–79.
Olsen, S.R., Cole, C.V., Watanabe, F.S., Dean, L.A., Estimation of Available Phosphorus in Soils by Extraction with Sodium Bicarbonate, vol. 939, 1954, USDA Circ, Washington, DC USDA.
Pooja, T., In, N.C., Yoonha, K., Effect of silicon fertilizer treatment on nodule formation and yield in soybean (Glycine max L.). Eur. J. Agron., 122, 2021, 126172.
Qiu, M.H., Zhang, R.F., Xue, C., Zhang, S.S., Li, S.Q., Zhang, N., Shen, Q.R., Application of bio-organic fertilizer can control Fusarium wilt of cucumber plants by regulating microbial community of rhizosphere soil. Biol. Fertil. Soils 48:7 (2012), 807–816.
Sakineh, A., Akram, S., Mahtab, O., Vahid, T., The stimulators and responsive genes to induce systemic resistance against pathogens: an exclusive focus on tomato as a model plant. Biocatal. Agric. Biotechnol., 33, 2021, 101993.
Schinner, F., Öhlinger, R., Kandeler, D.E., Margesin, R., Methods in Soil Biology. 1995, Springer Verlag, Berlin, Germany, 386–389.
Schloss, P.D., Westcott, S.L., Ryabin, T., Hall, J.R., Hartmann, M., Hollister, E.B., Introducing mothur: open-source, platform-independent, community supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75 (2009), 7537–7541.
Shafique, H.A., Sultana, V., Ehteshamul-Haque, S., Athar, M., Management of soil-borne diseases of organic vegetables. J. Plant Protect. Res. 56 (2016), 221–230.
Song, L.C., Niu, X.G., Zhang, N.W., Li, T.J., Effect of biochar-immobilized Sphingomonas sp. PJ2 on bioremediation of PAHs and bacterial community composition in saline soil. Chemosphere, 279, 2021, 10.1016/J.CHEMOSPHERE.2021.130427.
Soong, J.L., Marañon-Jimenez, S., Cotrufo, M.F., Boeckx, P., Bodé, S., Guenet, B., Peñuelas, J., Richter, A., Stahl, C., Verbruggen, E., Janssens, I.A., Soil microbial CNP and respiration responses to organic matter and nutrient additions: evidence from a tropical soil incubation. Soil Biol. Biochem. 122 (2018), 141–149.
Taketani, R.G., Lima, A.B., Da, C.J.E., Teixeira, W.G., Tiedje, J.M., Tsai, S.M., Bacterial community composition of anthropogenic biochar and Amazonian anthrosols assessed by 16S rRNA gene 454 pyrosequencing. Antonie Leeuwenhoek 104 (2013), 233–242.
Tao, L., Chu, G.X., Liu, T., Tang, C., Li, J.H., Liang, Y.C., Impacts of organic manure partial substitution for chemical fertilizer on cotton yield, soil microbial community and enzyme activities in mono-cropping system in drip irrigation condition. Acta Ecol. Sin. 34:21 (2014), 6137–6146.
Wang, Y., Dai, C.C., Cao, J.L., Xu, D.S., Comparison of the effects of fungal endophyte Gilmaniella sp. and its elicitor on Atractylodes lancea plantlets. World J. Microbiol. Biotechnol. 28:2 (2012), 575–584.
Wu, Y., Zhao, C.Y., Farmer, J., Sun, J.D., Effects of bio-organic fertilizer on pepper growth and Fusarium wilt biocontrol. Sci. Hortic. 193 (2015), 114–120.
Xu, N., Tan, G., Wang, H., Gai, X.P., Effect of biochar additions to soil on nitrogen leaching, microbial biomass and bacterial community structure. Eur. J. Soil Biol. 74 (2016), 1–8.
Yan, J.W., Ban, Z.J., Lu, H.Y., Li, D., Poverenov, E., Li, L., Luo, Z.S., The aroma volatile repertoire in strawberry fruit: a review. J. Sci. Food Agric. 98:12 (2018), 4395–4402.
Yang, T., Hu, J.Y., Lin, B., Xiang, M.C., Field experiment of multi-microbial agents against root-knot nematode Meloidogyne incognita on lettuce. Chin. J. Biol. Control 33:6 (2017), 826–832.
Zhang, D.Q., Yan, D.D., Fang, W.S., Huang, B., Wang, X.L., Wang, X.N., Zhu, J.H., Liu, J., Ouyang, C.B., Li, Y., Wang, Q.X., Cao, A.C., Chloropicrin alternated with biofumigation increases crop yield and modifies soil bacterial and fungal communities in strawberry production. Sci. Total Environ. 675 (2019), 615–622.
Zhang, J., Xia, M.C., Liu, H.Y., Zhang, M., Mi, G.Q., Yang, L.R., Efficacy of dazomet fumigation and bioorganic fertilizer in integrated control of cucumber root-knot nematode. J. Plant Protect. 46:4 (2019), 824–831.
Zhang, L.P., Shi, G.Y., Shi, G.H., Yu, Y.L., Li, M.Q., Su, G.L., Jia, X.X., Alleviating obstacles of continuous cropping in Lanzhou lily by soil fumigation combined with microbial fertilizer. J. Desert Res. 40:5 (2020), 169–179.
Zhang, Q.H., Zeng, X.G., Han, Y.C., Xiang, F.Y., Guo, C., Chen, F.y., Gu, Y.C., Effects of dazomet fumigation and biological fertilizer on strawberry soil fungal diversity under replant conditions. Microbiology China 45:5 (2018), 1048–1060.
Zhao, Q.Y., Shen, Q.R., Ran, W., Xiao, T.J., Xu, D.B., Xu, Y.C., Inoculation of soil by Bacillus subtilis Y-IVI improves plant growth and colonization of the rhizosphere and interior tissues of muskmelon (Cucumis melo L.). Biol. Fertil. Soils 47:5 (2011), 507–514.
Zhao, S., Chen, X., Deng, S.P., Dong, X.N., Song, A.P., Yao, J.J., Fang, W.M., Chen, F.D., McPhee, D.J., The effects of fungicide, soil fumigant, bio-organic fertilizer and their combined application on chrysanthemum Fusarium wilt controlling, soil enzyme activities and microbial properties. Molecules, 21, 2016, 526.
Zhang, Z.H., Li, H.X., Wei, X.H., Liu, X., Peng, G.X., Influence of biological fertilizers on banana wilt disease and microorganisms in soil (In Chinese). Ecol. Environ. 17:6 (2008), 2421–2425.