Hopmans, J. W.; Dep. of Land, Air, and Water Resources, College of Agricultural and Environmental Sciences, Univ. of California, Davis, CA 95616, United States
Javaux, M.; Earth and Life Inst, Environmental Sciences, Université catholique de Louvain, Croix du Sud, 2, L7.05.02, Louvain-la-Neuve, 1348, Belgium
Or, D.; Soil and Terrestrial Environmental Physics, ETH-Zürich, Universitätstrasse 16, Zürich, CHN F 29.1.8092, Switzerland
Roose, T.; Bioengineering Sciences Research Group, Faculty of Engineering and Environment, Univ. of Southampton, University Road, Southampton, SO17 1BJ, United Kingdom
Amelung, W.; Univ. of Bonn, INRES- Inst. of Crop Science and Resource Conservation, Soil Science and Soil Ecology, Nußallee 13, Bonn, 53115, Germany
Aitkenhead, M.; The James Hutton Inst, Craigiebuckler, Aberdeen, AB15 8QH, United Kingdom
Allison, S. D.; Ecology and Evolutionary Biology School of Biological Sciences, Univ. of California, Irvine, United States
Assouline, S.; Dep. of Environmental Physics and Irrigation Inst. of Soils, Water and Environment Sciences A.R.O- Volcani Center, PO Box 6, Bet Dagan, 50250, Israel
Finke, P.; Dep. of Geology and Soil Science, Ghent Univ, Krijgslaan 281 WE13, Ghent, B9000, Belgium
Flury, M.; Soil Physics/Vadose Zone Hydrology, Dep. of Crop and Soil Sciences, Washington State Univ, 2606 W Pioneer, Puyallup, WA 98371-4922, United States
Gaiser, T.; Univ. of Bonn Inst. of Crop Science and Resource Conservation, Katzenburgweg 5, Bonn, 53115, Germany
Govers, G.; Dep. of Earth and Environmental Sciences, Div. of Geography, KU Leuven, Celestijnenlaan 200E, Leuven, 3001, Belgium
Ghezzehei, T.; Life and Environmental Science School of Natural Science, 5200 North Lake Road, Merced, CA 95343, United States
Hallett, P.; Inst. of Biological and Environmental Sciences, Univ. of Aberdeen, Aberdeen, AB24 3UU, United Kingdom
Franssen, H. J. H.; Agrosphere Inst, IBG-3, Inst. of Bio-geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany, Centre for High-Performance Scientific Computing in Terrestrial Systems, HPSC TerrSys, Geoverbund ABC/J, Forschungszentrum Jülich GmbH, Germany
Heppell, J.; Bioengineering Sciences Research Group, Faculty of Engineering and Environment, Univ. of Southampton, University Road, Southampton, SO17 1BJ, United Kingdom
Horn, R.; Inst. for Plant Nutrition and Soil Science, Hermann Rodewaldstr. 2, Kiel, 24118, Germany
Huisman, J. A.; Agrosphere Inst, IBG-3, Inst. of Bio-geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany, Centre for High-Performance Scientific Computing in Terrestrial Systems, HPSC TerrSys, Geoverbund ABC/J, Forschungszentrum Jülich GmbH, Germany
Huisman, J. A.; Agrosphere Inst, IBG-3, Inst. of Bio-geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany, Centre for High-Performance Scientific Computing in Terrestrial Systems, HPSC TerrSys, Geoverbund ABC/J, Forschungszentrum Jülich GmbH, Germany
Jacques, D.; Inst. for Environment, Health and Safety, Belgian Nuclear Research Centre (SCK-CEN), Mol, Belgium
Jonard, François ; Université de Liège - ULiège > Département de géographie > Systèmes d'information géographiques
Kollet, S.; Agrosphere Inst, IBG-3, Inst. of Bio-geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany, Centre for High-Performance Scientific Computing in Terrestrial Systems, HPSC TerrSys, Geoverbund ABC/J, Forschungszentrum Jülich GmbH, Germany
Kollet, S.; Agrosphere Inst, IBG-3, Inst. of Bio-geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany, Centre for High-Performance Scientific Computing in Terrestrial Systems, HPSC TerrSys, Geoverbund ABC/J, Forschungszentrum Jülich GmbH, Germany
Lafolie, F.; INRA, UMR1114 EMMAH, Avignon Cedex 9, F-84914, France
Lamorski, K.; Inst. of Agrophysics, Polish Academy of Sciences, Doświadczalna Str. 4, Lublin, 20-290, Poland
Leitner, D.; Univ. of Vienna, Computational Science Center, Oskar Morgenstern-Platz 1, Vienna, 1090, Austria
Mcbratney, A.; Dep. of Environmental Sciences, The Univ. of SydneyNSW 2006, Australia
Minasny, B.; Dep. of Environmental Sciences, The Univ. of SydneyNSW 2006, Australia
Nowak, W.; Universität Stuttgart, Institut für Wasser- und Umweltsystemmodellierung (IWS), Lehrstuhl für Stochastische Simulation und Sicherheitsforschung für Hydrosysteme, Germany
Pachepsky, Y.; Environmental Microbial and Food Safety Laboratory, USDA ARS Beltsville Agricultural Research Center, Beltsville, MD 20705, United States
Padarian, J.; Dep. of Environmental Sciences, The Univ. of SydneyNSW 2006, Australia
Romano, N.; Univ. of Naples Federico II, Dep. of Agronomy, AFBE Division, Via Universita' n. 100, Portici, Napoli, 80055, Italy
Roth, K.; Inst. of Environmental Physics, Im Neuenheimer Feld 229, Heidelberg, 69120, Germany
Rothfuss, Youri ; Université de Liège - ULiège > Département GxABT > Echanges Eau - Sol - Plantes
Rowe, E. C.; Centre for Ecology and Hydrology, Environment Centre Wales, Deiniol Road, Bangor, LL57 2UW, United Kingdom
Schwen, A.; Institut für Hydraulik und landeskulturelle Wasserwirtschaft, Nußdorfer Lände 11, Wien, 1190, Australia
Šimůnek, J.; Dep. of Environmental Sciences, Univ. of California Riverside, Riverside, CA 92521, United States
Van Dam, J.; WU Environmental Sciences, Soil Physics and Land Management, PO Box 47, Wageningen, 6700AA, Netherlands
van der Zee, S. E. A. T. M.; WU Environmental Sciences, Soil Physics and Land Management, PO Box 47, Wageningen, 6700AA, Netherlands, School of Chemistry, Monash Univ, Melbourne, VIC 3800, Australia
Vogel, H. J.; Dep. Soil Physics, UFZ, Theodor-Lieser- Straße 4, Halle (Saale), 06120, Germany
Vrugt, J. A.; Dep. of Civil and Environmental Engineering and Dep. of Earth System Science, Univ. of California, Irvine, CA, United States
Vrugt, J. A.; Inst. for Biodiversity and Ecosystem dynamics, Univ. of Amsterdam, Netherlands
Wöhling, T.; Technische Universität Wöhling Dresden, Dep. of Hydrology, Dresden, 01069, Germany, Water and Earth System Science (WESS) Competence Cluster, Univ. of Tübingen, Inst. for Geoscience, Tübingen, 72076, Germany, Lincoln Agritech Ltd, Ruakura Research Centre, Hamilton, 3240, New Zealand
Wöhling, T.; Technische Universität Wöhling Dresden, Dep. of Hydrology, Dresden, 01069, Germany, Water and Earth System Science (WESS) Competence Cluster, Univ. of Tübingen, Inst. for Geoscience, Tübingen, 72076, Germany, Lincoln Agritech Ltd, Ruakura Research Centre, Hamilton, 3240, New Zealand
Wöhling, T.; Technische Universität Wöhling Dresden, Dep. of Hydrology, Dresden, 01069, Germany, Water and Earth System Science (WESS) Competence Cluster, Univ. of Tübingen, Inst. for Geoscience, Tübingen, 72076, Germany, Lincoln Agritech Ltd, Ruakura Research Centre, Hamilton, 3240, New Zealand
Young, I. M.; School of Environmental and Rural Science, Univ. of New England, Australia
Aarts, E., and J. Korst. 1989. Simulated annealing and Boltzmann machines: A stochastic approach to combinatorial optimization and neural computing. John Wiley & Sons Ltd., New York.
Abrahamsen, P., and S. Hansen. 2000. Daisy: An open soil-crop- atmosphere system model. Environ. Model. Softw. 15:313-330. doi:10.1016/S1364-8152(00)00003-7
Abril, J.-M., R. García-Tenorio, S.M. Enamorado, M.D. Hurtado, L. Andreu, and A. Delgado. 2008. The cumulative effect of three decades of phosphogypsum amendments in reclaimed marsh soils from SW Spain:226Ra,238U and Cd contents in soils and tomato fruit. Sci. Total Environ. 403:80-88. doi:10.1016/j.scitotenv.2008.05.013
Adamchuk, V.I., and R.A.V. Rossel. 2010. Development of on-the-go proximal soil sensor systems. In: R.A. Viscarra Rossel, A.B. McBratney, and B. Minasny, editors, Proximal soil sensing. Springer, New York. p. 15-28.
Addiscott, T.M. 1977. Simple computer-model for leaching in structured soils. J. Soil Sci. 28:554-563. doi:10.1111/j.1365-2389.1977.tb02263.x
Adhikari, K., and A.E. Hartemink. 2016. Linking soils to ecosystem services-A global review. Geoderma 262:101-111. doi:10.1016/j. geoderma.2015.08.009
Adhikari, K., A.E. Hartemink, B. Minasny, R.B. Kheir, M.B. Greve, and M.H. Greve. 2014. Digital mapping of soil organic carbon contents and stocks in Denmark. PLoS ONE 9. doi:10.1371/journal.pone.0105519
Aitkenhead, M., D. Donnelly, M. Coull, and E. Hastings. 2014. Innovations in environmental monitoring using mobile phone technology-A review. Int. J. Interactive Mobile Technol. 8(2):50-58.
Aitkenhead, M. 2016. Modelling soil ecosystem services. In: N. Sang and A. Ode-Sang, editors, A review on the state of the art in scenario modelling for environmental management. Naturvardsverket, Environmental Protection Agency, Stockholm. http://www.naturvardsverket.se/978- 91-620-6695-6 (accessed 20 Apr. 2016).
Aksoy, H., and M.L. Kavvas. 2005. A review of hillslope and watershed scale erosion and sediment transport models. Catena 64:247-271. doi:10.1016/j.catena.2005.08.008
Al-Sultan, K.S., and M.A. Al-Fawzan. 1997. A tabu search Hooke and Jeeves algorithm for unconstrained optimization. Eur. J. Oper. Res. 103:198-208. doi:10.1016/S0377-2217(96)00282-2
Alaoui, A., J. Lipiec, and H.H. Gerke. 2011. A review of the changes in the soil pore system due to soil deformation: A hydrodynamic perspective. Soil Tillage Res. 115-116:1-15. doi:10.1016/j.still.2011.06.002
Albright, W.H., C.H. Benson, G.W. Gee, A.C. Roesler, T. Abichou, P. Apiwantragoon, B.F. Lyles, and S.A. Rock. 2004. Field water balance of landfill final covers. J. Environ. Qual. 33:2317-2332. doi:10.2134/ jeq2004.2317
Alley, W.M. 1984. The palmer drought severity index: Limitations and assumptions. J. Clim. Appl. Meteorol. 23:1100-1109. doi:10.1175/1520- 0450(1984)023<1100:TPDSIL>2.0.CO;2
Allison, G.B., C.J. Barnes, and M.W. Hughes. 1983. The distribution of deuterium and18O in dry soils. 2. Experimental. J. Hydrol. 64:377-397. doi:10.1016/0022-1694(83)90078-1
Allison, S.D. 2012. A trait-based approach for modelling microbial litter decomposition. Ecol. Lett. 15:1058-1070. doi:10.1111/j.1461- 0248.2012.01807.x
Allison, S.D. 2014. Modeling adaptation of carbon use efficiency in microbial communities. Front. Microbiol. 28. doi:10.3389/ fmicb.2014.00571
Alonso, E.E., A. Gens, and A. Josa. 1990. A constitutive model for partially saturated soils. Geotechnique 40:405-430. doi:10.1680/ geot.1990.40.3.405
Amundson, R., A.A. Berhe, J.W. Hopmans, C. Olson, A.E. Sztein, and D.L. Sparks. 2015. Soil and human security in the 21st century. Science 348(6235). doi:10.1126/science.1261071
Araguás-Araguás, L., K. Rozanski, R. Gonfiantini, and D. Louvat. 1995. Isotope effects accompanying vacuum extraction of soil water for stable isotope analyses. J. Hydrol. 168:159-171. doi:10.1016/0022- 1694(94)02636-P
Archontoulis, S.V., F.E. Miguez, and K.J. Moore. 2014. Evaluating apsim maize, soil water, soil nitrogen, manure, and soil temperature modules in the midwestern united states. Agron. J. 106:1025-1040. doi:10.2134/ agronj2013.0421
Arnold, J.G., and N. Fohrer. 2005. Swat2000: Current capabilities and research opportunities in applied watershed modelling. Hydrol. Processes 19:563-572. doi:10.1002/hyp.5611
Arrouays, D., M.G. Grundy, A.E. Hartemink, J.W. Hempel, G.B.M. Heuvelink, S.Y. Hong, P. Lagacherie, G. Lelyk, A.B. McBratney, N.J. McKenzie, M.D.L. Mendonca-Santos, B. Minasny, L. Montanarella, I.O.A. Odeh, P.A. Sanchez, J.A. Thompson, and G.L. Zhang. 2014. GlobalSoilMap: Toward a fine-resolution global grid of soil properties. Adv. Agron. 125:93-134.
Arulampalam, M.S., S. Maskell, N. Gordon, and T. Clapp. 2002. A tutorial on particle filters for online nonlinear/non-Gaussian Bayesian tracking. IEEE Trans. Signal Processing 50:174-188. doi:10.1109/78.978374
Assouline, S. 2006a. Modeling the relationship between soil bulk density and the water retention curve. Vadose Zone J. 5:554-563. doi:10.2136/ vzj2005.0083
Assouline, S. 2006b. Modeling the relationship between soil bulk density and the hydraulic conductivity function. Vadose Zone J. 5:697-705. doi:10.2136/vzj2005.0084
Assouline, S. 2013. Infiltration into soils: Conceptual approaches and solutions. Water Resour. Res. 49:1755-1772. doi:10.1002/wrcr.20155
Assouline, S., and A. Ben-Hur. 2006. Effects of rainfall intensity and slope gradient on the dynamics of interrill erosion during soil surface sealing. Catena 66:211-220. doi:10.1016/j.catena.2006.02.005
Assouline, S., and K. Narkis. 2011. Effects of long-term irrigation with treated wastewater on the hydraulic properties of a clayey soil. Water Resour. Res. 47. doi:10.1029/2011WR010498
Assouline, S., and K. Narkis. 2013. Effect of long-term irrigation with treated wastewater on the root zone environment. Vadose Zone J. 12. doi:10.2136/vzj2012.0216
Assouline, S., D. Russo, A. Silber, and D. Or. 2015. Balancing water scarcity and quality for sustainable irrigated agriculture. Water Resour. Res. 51:3419-3436. doi:10.1002/2015WR017071
Assouline, S., J.S. Selker, and J.Y. Parlange. 2007. A simple accurate method to predict time of ponding under variable intensity rainfall. Water Resour. Res. 43. doi:10.1029/2006WR005138
Assouline, S., and U. Shavit. 2004. Effects of management policies, including artificial recharge, on salinization in a sloping aquifer: The Israeli Coastal Aquifer case. Water Resour. Res. 40. doi:10.1029/2003WR002290
Attard, E., S. Recous, A. Chabbi, C. De Berranger, N. Guillaumaud, J. Labreuche, L. Philippot, B. Schmid, and X. Le Roux. 2011. Soil environmental conditions rather than denitrifier abundance and diversity drive potential denitrification after changes in land uses. Glob. Change Biol. 17:1975-1989. doi:10.1111/j.1365-2486.2010.02340.x
Babaeian, E., M. Homaee, C. Montzka, H. Vereecken, and A.A. Norouzi. 2015. Towards retrieving soil hydraulic properties by hyperspectral remote sensing. Vadose Zone J. 14. doi:10.2136/vzj2014.07.0080
Balay, S., S. Abhyankar, M. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W. Gropp, D. Karpeyev, D. Kaushik, M. Knepley, L. Curfman McInnes, K. Rupp, B. Smith, S. Zampini, and H. Zhang. 2015. PETSc users manual. Rev. 3.6. Mathematics and computer science division, Argonne National Lab. Available at http://www.mcs.anl.gov/ petsc/petsc-current/docs/manual.pdf (accessed 20 Apr. 2016).
Balks, M.R., W.J. Bond, and C.J. Smith. 1998. Effects of sodium accumulation on soil physical properties under an effluent-irrigated plantation. Aust. J. Soil Res. 36:821-830. doi:10.1071/S97064
Barnes, C.J., and G.B. Allison. 1983. The distribution of deuterium and O-18 in dry soils. 1. Theory. J. Hydrol. 60:141-156. doi:10.1016/0022- 1694(83)90018-5
Barnes, C.J., and G.B. Allison. 1984. The distribution of deuterium and O-18 in dry soils. 3. Theory for non-isothermal water-movement. J. Hydrol. 74:119-135. doi:10.1016/0022-1694(84)90144-6
Barnes, C.J., and G.R. Walker. 1989. The distribution of deuterium and O-18 in dry soils during unsteady evaporation from a dry soil. J. Hydrol. 112:55-67. doi:10.1016/0022-1694(89)90180-7
Barton, J.W., and R.M. Ford. 1997. Mathematical model for characterization of bacterial migration through sand cores. Biotechnol. Bioeng. 53:487-496. doi:10.1002/(SICI)1097-0290(19970305)53:5<487::AIDBIT6> 3.0.CO;2-D
Bastiaanssen, W.G.M., M. Menenti, R.A. Feddes, and A.A.M. Holtslag. 1998. A remote sensing surface energy balance algorithm for land (SEBAL). 1. Formulation. J. Hydrol. 212-213:198-212. doi:10.1016/S0022- 1694(98)00253-4
Basu, S.K., and N. Kumar. 2014. Modelling and simulation of diffusive processes: Methods and applications. Simulation foundations, methods, and applications. Springer International, Cham, Switzerland.
Bateman, I.J., A.R. Harwood, G.M. Mace, R.T. Watson, D.J. Abson, B. Andrews, A. Binner, A. Crowe, B.H. Day, S. Dugdale, C. Fezzi, J. Foden, D. Hadley, R. Haines-Young, M. Hulme, A. Kontoleon, A.A. Lovett, P. Munday, U. Pascual, J. Paterson, G. Perino, A. Sen, G. Siriwardena, D. van Soest, and M. Termansen. 2013. Bringing ecosystem services into economic decision-making: Land use in the United Kingdom. Science 341:45-50. doi:10.1126/science.1234379
Batjes, N.H. 2009. Harmonized soil profile data for applications at global and continental scales: Updates to the wise database. Soil Use Manage. 25:124-127. doi:10.1111/j.1475-2743.2009.00202.x
Batlle-Aguilar, J., A. Brovelli, A. Porporato, and D.A. Barry. 2011. Modelling soil carbon and nitrogen cycles during land use change. A review. Agron. Sustain. Devel. 31:251-274. doi:10.1051/agro/2010007
Battiti, R. 1992. First- and second-order methods for learning: Between steepest descent and Newton's method. Neural Comput. 4:141-166. doi:10.1162/neco.1992.4.2.141
Baumgarten, W., J. Dorner, and R. Horn. 2013. Microstructural development in volcanic ash soils from south Chile. Soil Tillage Res. 129:48-60. doi:10.1016/j.still.2013.01.007
Bayer, A., M. Bachmann, A. Mülle, and H. Kaufmann. 2012. A comparison of feature-based MLR and PLS regression techniques for the prediction of three soil constituents in a degraded south African ecosystem. Appl. Environ. Soil Sci. 2012. doi:10.1155/2012/971252
Bear, J. 1972. Dynamics of fluid in porous media. Elsevier, New York.
Bellin, A., A. Rinaldo, W.J.P. Bosma, S. Vanderzee, and Y. Rubin. 1993. Linear equilibrium adsorbing solute transport in physically and chemically heterogeneous porous formations. 1. Analytical solutions. Water Resour. Res. 29:4019-4030. doi:10.1029/93WR02303
Beltman, W.H.J., J.J.T.I. Boesten, and S.E.A.T.M. van der Zee. 2008. Spatial moment analysis of transport of nonlinearly adsorbing pesticides using analytical approximations. Water Resour. Res. 44. doi:10.1029/2007WR006436
Ben-Dor, E. 2002. Quantitative remote sensing of soil properties. Adv. Agron. 75:173-243. doi:10.1016/S0065-2113(02)75005-0
Ben-Dor, E., S. Chabrillat, J.A.M. Dematte, G.R. Taylor, J. Hill, M.L. Whiting, and S. Sommer. 2009. Using imaging spectroscopy to study soil properties. Remote Sens. Environ. 113:S38-S55. doi:10.1016/j. rse.2008.09.019
Ben-Dor, E., Y. Inbar, and Y. Chen. 1997. The reflectance spectra of organic matter in the visible near-infrared and short wave infrared region (400-2500 nm) during a controlled decomposition process. Remote Sens. Environ. 61:1-15. doi:10.1016/S0034-4257(96)00120-4
Berlemont, R., and A.C. Martiny. 2013. Phylogenetic distribution of potential cellulases in bacteria. Appl. Environ. Microbiol. 79:1545-1554. doi:10.1128/AEM.03305-12
Berli, M., M. Accorsi, and D. Or. 2006. Size and shape evolution of pores in a viscoplastic matrix under compression. Int. J. Numer. Anal. Methods Geomech. 30:1259-1281. doi:10.1002/nag.529
Berli, M., A. Carminati, T. Ghezzehei, and D. Or. 2008. Evolution of unsaturated hydraulic conductivity of aggregated soils due to compressive forces. Water Resour. Res. 44. doi:10.1029/2007WR006501
Berli, M., F. Casini, W. Attinger, R. Schulin, S.M. Springmann, and J.M. Kirby. 2015. Compressibility of undisturbed silt loam soil-Measurements and simulations. Vadose Zone J. 14. doi:10.2136/vzj2014.10.0153
Berli, M., J. Kirby, S. Springman, and R. Schulin. 2003. Modelling compaction of agricultural subsoils by tracked heavy construction machinery under various moisture conditions in Switzerland. Soil Tillage Res. 73:57- 66. doi:10.1016/S0167-1987(03)00099-0
Beven, K. 2006. A manifesto for the equifinality thesis. J. Hydrol. 320:18-36.
Beven, K., and P. Germann. 2013. Macropores and water flow in soils revisited. Water Resour. Res. 49:3071-3092. doi:10.1002/wrcr.20156
Bierkens, P.A.F., and P. de Willigen. 2000. Upscaling and downscaling methods for environmental research. Kluwer Academic Publishers, Dordrecht, the Netherlands.
Blagodatsky, S., and P. Smith. 2012. Soil physics meets soil biology: Towards better mechanistic prediction of greenhouse gas emissions from soil. Soil Biol. Biochem. 47:78-92. doi:10.1016/j.soilbio.2011.12.015
Bonfante, A., A. Basile, M. Acutis, R. De Mascellis, P. Manna, A. Perego, and F. Terribile. 2010. SWAP, CropSyst and MACRO comparison in two contrasting soils cropped with maize in northern Italy. Agric. Water Manage. 97:1051-1062. doi:10.1016/j.agwat.2010.02.010
Bonten, L.T.C., J.G. Kroes, P. Groenendijk, and B. Van Der Grift. 2012. Modeling diffusive Cd and Zn contaminant emissions from soils to surface waters. J. Contam. Hydrol. 138-139:113-122. doi:10.1016/j. jconhyd.2012.06.008
Bornemann, L., G. Welp, and W. Amelung. 2010. Particulate organic matter at the field scale: Rapid acquisition using mid-infrared spectroscopy. Soil Sci. Soc. Am. J. 74:1147-1156. doi:10.2136/sssaj2009.0195
Bornemann, L., G. Welp, S. Brodowski, A. Rodionov, and W. Amelung. 2008. Rapid assessment of black carbon in soil organic matter using midinfrared spectroscopy. Org. Geochem. 39:1537-1544. doi:10.1016/j. orggeochem.2008.07.012
Bradford, J.M., and G.R. Foster. 1996. Interrill soil erosion and slope steepness factors. Soil Sci. Soc. Am. J. 60:909-915. doi:10.2136/ sssaj1996.03615995006000030033x
Bras, R.L., and D.J. Seo. 1987. Irrigation control in the presence of salinityextended linear quadratic approach. Water Resour. Res. 23:1153- 1161. doi:10.1029/WR023i007p01153
Braud, I., T. Bariac, P. Biron, and M. Vauclin. 2009. Isotopic composition of bare soil evaporated water vapor. Part II: Modeling of RUBIC IV experimental results. J. Hydrol. 369:17-29. doi:10.1016/j. jhydrol.2009.01.038
Braud, I., T. Bariac, J.P. Gaudet, and M. Vauclin. 2005. SiSPAT-isotope, a coupled heat, water and stable isotope (HDO and H2 18O) transport model for bare soil. Part I. Model description and first verifications. J. Hydrol. 309:277-300. doi:10.1016/j.jhydrol.2004.12.013
Bresler, E. 1973. Simultaneous transport of solute and water under transient unsaturated flow conditions. Water Resour. Res. 9:975-986. doi:10.1029/WR009i004p00975
Bresler, E. 1987. Application of a conceptual-model to irrigation water requirement and salt tolerance of crops. Soil Sci. Soc. Am. J. 51:788- 793. doi:10.2136/sssaj1987.03615995005100030039x
Bresler, E., and R.J. Hanks. 1969. Numerical method for estimating simultaneous flow of water and salt in unsaturated soils. Soil Sci. Soc. Am. Proc. 33:827-832. doi:10.2136/sssaj1969.03615995003300060013x
Bresler, E., and G.J. Hoffman. 1986. Irrigation management for soilsalinity control- theories and tests. Soil Sci. Soc. Am. J. 50:1552-1559. doi:10.2136/sssaj1986.03615995005000060034x
Bicknell, B.R., J.C. Imhoff, J.L. Kittle, and R.C. Johanson. 1997. Hydrological simulation program-FORTRAN user's manual for version 11. EPA/600/R-97/080. USEPA, Athens, GA.
Bricklemyer, R.S., P.R. Miller, P.J. Turk, K. Paustian, T. Keck, and G.A. Nielsen. 2007. Sensitivity of the century model to scale-related soil texture variability. Soil Sci. Soc. Am. J. 71:784-792. doi:10.2136/sssaj2006.0168
Bridges, E.M. 1992. World map of the status of human induced soil degradation, Oldeman, L.R., Hakkeling, R.T.A. and Sombroek, W.G. UNEP/ISRIC, Nairobi, Kenya, 1990. ISBN 90 6672 042 5, US$25.00 (paperback), 3 maps and explanatory note + 27 pp. Land Degrad. Dev. 3:68-69. doi:10.1002/ldr.3400030109
Brimhall, G.H., and W.E. Dietrich. 1987. Constitutive mass balance relations between chemical-composition, volume, density, porosity, and strain in metasomatic hydrochemical systems-Results on weathering and pedogenesis. Geochim. Cosmochim. Acta 51:567- 587. doi:10.1016/0016-7037(87)90070-6
Brisson, N., C. Gary, E. Justes, R. Roche, B. Mary, D. Ripoche, D. Zimmer, J. Sierra, P. Bertuzzi, P. Burger, F. Bussiere, Y.M. Cabidoche, P. Cellier, P. Debaeke, J.P. Gaudillere, C. Henault, F. Maraux, B. Seguin, and H. Sinoquet. 2003. An overview of the crop model STICS. Eur. J. Agron. 18:309-332. doi:10.1016/S1161-0301(02)00110-7
Brown, D.J. 2007. Using a global VNIR soil-spectral library for local soil characterization and landscape modeling in a 2nd-order Uganda watershed. Geoderma 140:444-453. doi:10.1016/j. geoderma.2007.04.021
Buchanan, S., J. Triantafilis, I.O.A. Odeh, and R. Subansinghe. 2012. Digital soil mapping of compositional particle-size fractions using proximal and remotely sensed ancillary data. Geophysics 77:WB201-WB211. doi:10.1190/geo2012-0053.1
Bui, E.N., and B.L. Henderson. 2013. C:N:P stoichiometry in Australian soils with respect to vegetation and environmental factors. Plant Soil 373:553-568. doi:10.1007/s11104-013-1823-9
Burgers, G., P. Jan van Leeuwen, and G. Evensen. 1998. Analysis scheme in the ensemble Kalman filter. Mon. Weather Rev. 126:1719-1724. doi:10.1175/1520-0493(1998)126<1719:ASITEK>2.0.CO;2
Byrd, R.H., R.B. Schnabel, and G.A. Shultz. 1987. A trust region algorithm for nonlinearly constrained optimization. SIAM J. Numer. Anal. 24:1152- 1170. doi:10.1137/0724076
Calzolari, C., F. Ungaro, N. Filippi, M. Guermandi, F. Malucelli, N. Marchi, F. Staffilani, and P. Tarocco. 2016. A methodological framework to assess the multiple contributions of soils to ecosystem services delivery at regional scale. Geoderma 261:190-203. doi:10.1016/j. geoderma.2015.07.013
Campbell, C.G., F. Garrido, V. Illera, and M.T. García-González. 2006. Transport of Cd, Cu and Pb in an acid soil amended with phosphogypsum, sugar foam and phosphoric rock. Appl. Geochem. 21:1030-1043. doi:10.1016/j.apgeochem.2006.02.023
Canal, N., J.-C. Calvet, B. Decharme, D. Carrer, S. Lafont, and G. Pigeon. 2014. Evaluation of root water uptake in the ISBA-A-gs land surface model using agricultural yield statistics over France. Hydrol. Earth Syst. Sci. 18:4979-4999.
Carminati, A., and D. Vetterlein. 2013. Plasticity of rhizosphere hydraulic properties as a key for efficient utilization of scarce resources. Ann. Bot. (Lond.) 112:277-290. doi:10.1093/aob/mcs262
Casa, R., F. Castaldi, S. Pascucci, A. Palombo, and S. Pignatti. 2013. A comparison of sensor resolution and calibration strategies for soil texture estimation from hyperspectral remote sensing. Geoderma 197-198:17-26. doi:10.1016/j.geoderma.2012.12.016
Castrignano, A., G. Buttafuoco, R. Comolli, and A. Castrignano. 2011. Using digital elevation model to improve soil pH prediction in an alpine doline. Pedosphere 21:259-270. doi:10.1016/S1002-0160(11)60126-4
Cazelles, K., W. Otten, P.C. Baveye, and R.E. Falconer. 2013. Soil fungal dynamics: Parameterisation and sensitivity analysis of modelled physiological processes, soil architecture and carbon distribution. Ecol. Modell. 248:165-173. doi:10.1016/j.ecolmodel.2012.08.008
Celia, M.A., E.T. Bouloutas, and R.L. Zarba. 1990. A general massconservative numerical-solution for the unsaturated flow equation. Water Resour. Res. 26:1483-1496. doi:10.1029/WR026i007p01483
Cerdan, O., G. Govers, Y. Le Bissonnais, K. Van Oost, J. Poesen, N. Saby, A. Gobin, A. Vacca, J. Quinton, K. Auerswald, A. Klik, F. Kwaad, D. Raclot, I. Ionita, J. Rejman, S. Rousseva, T. Muxart, M.J. Roxo, and T. Dostal. 2010. Rates and spatial variations of soil erosion in Europe: A study based on erosion plot data. Geomorphology 122:167-177. doi:10.1016/j.geomorph.2010.06.011
Cetin, B.C., J. Barhen, and J.W. Burdick. 1993. Terminal repeller unconstrained subenergy tunneling (TRUST) for fast global optimization. J. Optim. Theory Appl. 77:97-126. doi:10.1007/BF00940781
Chan, Y.K., J.D. Van Nostrand, J.Z. Zhou, S.B. Pointing, and R.L. Farrell. 2013. Functional ecology of an Antarctic dry valley. Proc. Natl. Acad. Sci. USA 110:8990-8995. doi:10.1073/pnas.1300643110
Chang, W.-S., and L.J. Halverson. 2003. Reduced water availability influences the dynamics, development, and ultrastructural properties of Pseudomonas putida biofilms. J. Bacteriol. 185. doi:10.1128/ JB.185.20.6199-6204.2003
Chapin, F.S., L. Moilanen, and K. Kielland. 1993. Preferential use of organic nitrogen for growth by a nonmycorrhizal arctic sedge. Nature 361:150-153. doi:10.1038/361150a0
Chen, F., W.T. Crow, P.J. Starks, and D.N. Moriasi. 2011. Improving hydrologic predictions of a catchment model via assimilation of surface soil moisture. Adv. Water Resour. 34:526-536. doi:10.1016/j. advwatres.2011.01.011
Chen, L., S. Sela, T. Svoray, and S. Assouline. 2012. The roles of soil surface sealing, microtopography and vegetation in rainfall-runoff processes in semi-arid areas. Water Resour. Res. 49:1-15. doi:10.1002/wrcr.20360
Chen, Y., and D. Zhang. 2006. Data assimilation for transient flow in geologic formations via ensemble Kalman filter. Adv. Water Resour. 29:1107-1122. doi:10.1016/j.advwatres.2005.09.007
Childs, S.W., and R.J. Hanks. 1975. Model of soil salinity effects on crop growth. Soil Sci. Soc. Am. J. 39:617-622. doi:10.2136/ sssaj1975.03615995003900040016x
Chirico, G.B., H. Medina, and N. Romano. 2010. Functional evaluation of ptf prediction uncertainty: An application at hillslope scale. Geoderma 155:193-202. doi:10.1016/j.geoderma.2009.06.008
Clark, M.P., A.G. Slater, D.E. Rupp, R.A. Woods, J.A. Vrugt, H.V. Gupta, T. Wagener, and L.E. Hay. 2008. Framework for understanding structural errors (fuse): A modular framework to diagnose differences between hydrological models. Water Resour. Res. 44. doi:10.1029/2007WR006735
Cohen, S., G. Willgoose, and G. Hancock. 2010. The MARM3D spatially distributed soil evolution model: Three-dimensional model framework and analysis of hillslope and landform responses. J. Geophys. Res. Earth Surf. 115. doi10.1029/2009JF001536
Cokelaer, T., C. Pradal, and C. Godin. 2010. Introduction to OpenAlea: A platform for plant modelling. Available at http://www-sop.inria.fr/ virtualplants/Publications/2010/CPG10/talk.pdf (accessed 26 Apr. 2016).
Cole, C.V., G.S. Innis, and J.W.B. Stewart. 1978. Simulations of phosphorus cycling in semi arid grasslands. In: G.S. Innis, editor, Grassland simulation model. Ecological Studies 26. p. 205-230. doi:10.1007/978- 1-4612-9929-5_8
Coleman, K., D.S. Jenkinson, G.J. Crocker, P.R. Grace, J. Klir, M. Korschens, P.R. Poulton, and D.D. Richter. 1997. Simulating trends in soil organic carbon in long-term experiments using RothC-26.3. Geoderma 81:29- 44. doi:10.1016/S0016-7061(97)00079-7
Courault, D., B. Seguin, and A. Olioso. 2005. Review on estimation of evapotranspiration from remote sensing data: From empirical to numerical modeling approaches. Irrig. Drain. Syst. 19:223-249. doi:10.1007/s10795-005-5186-0
Coutts, M.P. 1983. Root architecture and tree stability. Plant Soil 71:171- 188. doi:10.1007/BF02182653
Coutts, M.P. 1986. Components of tree stability in Sitka spruce on peaty gley soil. Forestry 59:173-197. doi:10.1093/forestry/59.2.173
Coutts, M.P., C.C.N. Nielsen, and B.C. Nicoll. 1999. The development of symmetry, rigidity and anchorage in the structural root system of conifers. Plant Soil 217:1-15. doi:10.1023/A:1004578032481
Couvreur, V., J. Vanderborght, X. Draye, and M. Javaux. 2014. Dynamic aspects of soil water availability for isohydric plants: Focus on root hydraulic resistances. Water Resour. Res. 50:8891-8906. doi:10.1002/2014WR015608
Couvreur, V., J. Vanderborght, and M. Javaux. 2012. A simple threedimensional macroscopic root water uptake model based on the hydraulic architecture approach. Hydrol. Earth Syst. Sci. 16:2957-2971. doi:10.5194/hess-16-2957-2012
Craig, H. 1961. Isotopic variations in meteoric waters. Science 133:1702. doi:10.1126/science.133.3465.1702
Crawford, J.W., L. Deacon, D. Grinev, J.A. Harris, K. Ritz, B.K. Singh, and I. Young. 2011. Microbial diversity affects self-organization of the soilmicrobe system with consequences for function. J. R. Soc. Interface 9:1302-1310. doi:10.1098/rsif.2011.0679
Curtis, T.P., W.T. Sloan, and J.W. Scannell. 2002. Estimating prokaryotic diversity and its limits. Proc. Natl. Acad. Sci. USA 99:10494-10499. doi:10.1073/pnas.142680199
Dai, A., K.E. Trenberth, and T. Qian. 2004. A global dataset of palmer drought severity index for 1870-2002: Relationship with soil moisture and effects of surface warming. J. Hydrometeorol. 5:1117-1130. doi:10.1175/JHM-386.1
Daly, K.R., and T. Roose. 2015. Homogenization of two fluid flow in porous media. Proc. R. Soc. London A. Math. Phys. Eng. Sci. 471. doi:10.1098/ rspa.2014.0564
Daniel, R. 2004. The soil metagenome- a rich resource for the discovery of novel natural products. Curr. Opin. Biotechnol. 15:199-204. doi:10.1016/j.copbio.2004.04.005
Dann, R.L., M.E. Close, R. Lee, and L. Pang. 2006. Impact of data quality and model complexity on prediction of pesticide leaching. J. Environ. Qual. 35:628-640. doi:10.2134/jeq2005.0257
Darrah, P.R. 1991. Models of the rhizosphere. 1. Microbial-population dynamics around a root releasing soluble and insoluble carbon. Plant Soil 133:187-199. doi:10.1007/BF00009191
Darrah, P.R., D.L. Jones, G.J.D. Kirk, and T. Roose. 2006. Modelling the rhizosphere: A review of methods for 'upscaling' to the whole-plant scale. Eur. J. Soil Sci. 57:13-25. doi:10.1111/j.1365-2389.2006.00786.x
David, O., J.C. Ascough, W. Lloyd, T.R. Green, K.W. Rojas, G.H. Leavesley, and L.R. Ahuja. 2013. A software engineering perspective on environmental modeling framework design: The object modeling system. Environ. Model. Softw. 39:201-213. doi:10.1016/j. envsoft.2012.03.006
Davidson, M., T.L. Toan, F. Mattia, T. Manninen, P. Borderies, I. Chenerie, and M. Borgeaud. 1998. A validation of multi-scale surfaces roughness description for the modelling of radar backscattering from bare soil surfaces. ESA Spec. Publ. 441:395-400.
Dawson, Q., C. Kechavarzi, P.B. Leeds-Harrison, and R.G.O. Burton. 2010. Subsidence and degradation of agricultural peatlands in the fenlands of Norfolk, UK. Geoderma 154:181-187. doi:10.1016/j. geoderma.2009.09.017
De Barros, I., J.R. Williams, and T. Gaiser. 2004. Modeling soil nutrient limitations to crop production in semiarid NE of brazil with a modified EPIC version I. Changes in the source code of the model. Ecol. Model. 178:441-456. doi:10.1016/j.ecolmodel.2004.04.015
De Benedetto, D., A. Castrignanò, M. Rinaldi, S. Ruggieri, F. Santoro, B. Figorito, S. Gualano, M. Diacono, and R. Tamborrino. 2013. An approach for delineating homogeneous zones by using multi-sensor data. Geoderma 199:117-127. doi:10.1016/j.geoderma.2012.08.028
de Groot, R.S., M.A. Wilson, and R.M.J. Boumans. 2002. A typology for the classification, description and valuation of ecosystem functions, goods and services. Ecol. Econ. 41:393-408. doi:10.1016/S0921- 8009(02)00089-7
de Jong van Lier, Q., J.C. van Dam, K. Metselaar, J. de Jong, and W.H.M. Duijnisveld. 2008. Macroscopic root water uptake distribution using a matric flux potential approach Vadose Zone J. 7:1065-1078. doi:10.2136/vzj2007.0083
De Lannoy, G.J., R.H. Reichle, P.R. Houser, V. Pauwels, and N.E. Verhoest. 2007. Correcting for forecast bias in soil moisture assimilation with the ensemble Kalman filter. Water Resour. Res. 43. doi:10.1029/2006WR005449
de Noblet-Ducoudré, N., S. Gervois, P. Ciais, N. Viovy, N. Brisson, B. Seguin, and A. Perrier. 2004. Coupling the soil-vegetation-atmosphere- transfer scheme ORCHIDEE to the agronomy model STICS to study the influence of croplands on the European carbon and water budgets. Agronomie 24:397-407. doi:10.1051/agro:2004038
de Ruiter, P.C., J.C. Moore, K.B. Zwart, L.A. Bouwman, J. Hassink, J. Bloem, J.A. De Vos, J.C.Y. Marinissen, W.A.M. Didden, G. Lebbink, and L. Brussaard. 1993. Simulation of nitrogen mineralization in the belowground food webs of two winter wheat fields. J. Appl. Ecol. 30:95-106. doi:10.2307/2404274
de Vries, F.T., E. Thebault, M. Liiri, K. Birkhofer, M.A. Tsiafouli, L. Bjornlund, H.B. Jorgensen, M.V. Brady, S. Christensen, P.C. de Ruiter, T. d'Hertefeldt, J. Frouz, K. Hedlund, L. Hemerik, W.H.G. Hol, S. Hotes, S.R. Mortimer, H. Setala, S.P. Sgardelis, K. Uteseny, W.H. van der Putten, V. Wolters, and R.D. Bardgett. 2013. Soil food web properties explain ecosystem services across European land use systems. Proc. Natl. Acad. Sci. USA 110:14296-14301. doi:10.1073/pnas.1305198110
Decharme, B., A. Boone, C. Delire, and J. Noilhan. 2011. Local evaluation of the interaction between soil biosphere atmosphere soil multilayer diffusion scheme using four pedotransfer functions. J. Geophys. Res., D, Atmos. 116. doi:10.1029/2011JD016002
Dechesne, A., G. Wang, G. Gulez, D. Or, and B.F. Smets. 2010. Hydrationcontrolled bacterial motility and dispersal on surfaces. Proc. Natl. Acad. Sci. USA 107:14369-14372. doi:10.1073/pnas.1008392107
Défossez, P., G. Richard, T. Keller, V. Adamiade, A. Govind, and B. Mary. 2014. Modelling the impact of declining soil organic carbon on soil compaction: Application to a cultivated Eutric Cambisol with massive straw exportation for energy production in northern France. Soil Tillage Res. 141:44-54. doi:10.1016/j.still.2014.03.003
Dekker, L.W., and C.J. Ritsema. 1994. How water moves in a water repellent sandy soil. 1. Potential and actual water repellency. Water Resour. Res. 30:2507-2517. doi:10.1029/94WR00749
del Mar Alguacil, M., E. Torrecillas, P. Torres, F. Garcia-Orenes, and A. Roldan. 2012. Long-term effects of irrigation with waste water on soil am fungi diversity and microbial activities: The implications for agroecosystem resilience. PLoS ONE 7. doi:10.1371/journal.pone.0047680
Delmas, M., L.T. Pak, O. Cerdan, V. Souchere, Y. Le Bissonnais, A. Couturier, and L. Sorel. 2012. Erosion and sediment budget across scale: A case study in a catchment of the European loess belt. J. Hydrol. 420- 421:255-263. doi:10.1016/j.jhydrol.2011.12.008
Dematte, J.A.M., A.A. Sousa, M.C. Alves, M.R. Nanni, P.R. Fiorio, and R.C. Campos. 2006. Determining soil water status and other soil characteristics by spectral proximal sensing. Geoderma 135:179-195. doi:10.1016/j.geoderma.2005.12.002
Dematte, J.A.M., and F.D. Terra. 2014. Spectral pedology: A new perspective on evaluation of soils along pedogenetic alterations. Geoderma 217-218:190-200. doi:10.1016/j.geoderma.2013.11.012
Den Herder, G., G. Van Isterdael, T. Beeckman, and I. De Smet. 2010. The roots of a new green revolution. Trends Plant Sci. 15:600-607. doi:10.1016/j.tplants.2010.08.009
Dennis, J.E., and J.J. More. 1977. Quasi-newton methods, motivation and theory. SIAM Rev. 19:46-89. doi:10.1137/1019005
Diaz, M.J.C., E.D. Fernandez-Nieto, and A.M. Ferreiro. 2008. Sediment transport models in shallow water equations and numerical approach by high order finite volume methods. Comput. Fluids 37:299-316. doi:10.1016/j.compfluid.2007.07.017
Dickinson, R.E., A. Henderson-Sellers, P.J. Kennedy, and M.F. Wilson. 1986. Biosphere-atmosphere transfer scheme (BATS) for the NCAR community climate model. National Center for Atmospheric Research, Atmospheric Analysis and Prediction Division, Washington, DC.
Diersch, H.J.G., and P. Perrochet. 1999. On the primary variable switching technique for simulating unsaturated-saturated flows. Adv. Water Resour. 23:271-301. doi:10.1016/S0309-1708(98)00057-8
Dimitrov, M., J. Vanderborght, K. Kostov, K. Jadoon, L. Weihermüller, T. Jackson, R. Bindlish, Y. Pachepsky, M. Schwank, and H. Vereecken. 2014. Soil hydraulic parameters and surface soil moisture of a tilled bare soil plot inversely derived from L-band brightness temperatures. Vadose Zone J. 13. doi:10.2136/vzj2014.09.0133
Dion, P. 2008. Molecular mechanism of plant and microbe coexistence. Springer, New York. doi:10.1007/978-3-540-75575-3
Dominati, E., M. Patterson, and A. Mackay. 2010. A framework for classifying and quantifying the natural capital and ecosystem services of soils. Ecol. Econ. 69:1858-1868. doi:10.1016/j.ecolecon.2010.05.002
Dominati, E.J. 2013. Natural capital and ecosystem services of soils. In: Ecosystem services in New Zealand-Conditions and trends. Manaaki Whenua Press, Lincoln, New Zealand. p. 132-142.
Donatelli, M., G. Russell, A. Rizzoli, M. Acutis, M. Adam, I. Athanasiadis, M. Balderacchi, L. Bechini, H. Belhouchette, G. Bellocchi, J.-E. Bergez, M. Botta, E. Braudeau, S. Bregaglio, L. Carlini, E. Casellas, F. Celette, E. Ceotto, M. Charron-Moirez, R. Confalonieri, M. Corbeels, L. Criscuolo, P. Cruz, A. di Guardo, D. Ditto, C. Dupraz, M. Duru, D. Fiorani, A. Gentile, F. Ewert, C. Gary, E. Habyarimana, C. Jouany, K. Kansou, R. Knapen, G. Filippi, P. Leffelaar, L. Manici, G. Martin, P. Martin, E. Meuter, N. Mugueta, R. Mulia, M. van Noordwijk, R. Oomen, A. Rosenmund, V. Rossi, F. Salinari, A. Serrano, A. Sorce, G. Vincent, J.- P. Theau, O. Thérond, M. Trevisan, P. Trevisiol, F. van Evert, D. Wallach, J. Wery, and A. Zerourou. 2010. A component-based framework for simulating agricultural production and externalities. In: F.M. Brouwer and M.K. Ittersum, editors, Environmental and agricultural modelling. Springer, Dordrecht, the Netherlands, p. 63-108.