Functional parcellation of human and macaque striatum reveals human-specific connectivity in the dorsal caudate.

[en] A wide homology between human and macaque striatum is often assumed as in both the striatum is involved in cognition, emotion and executive functions. However, differences in functional and structural organization between human and macaque striatum may reveal evolutionary divergence and shed light on human vulnerability to neuropsychiatric diseases. For instance, dopaminergic dysfunction of the human striatum is considered to be a pathophysiological underpinning of different disorders, such as Parkinson's disease (PD) and schizophrenia (SCZ). Previous investigations have found a wide similarity in structural connectivity of the striatum between human and macaque, leaving the cross-species comparison of its functional organization unknown. In this study, resting-state functional connectivity (RSFC) derived striatal parcels were compared based on their homologous cortico-striatal connectivity. The goal here was to identify striatal parcels whose connectivity is human-specific compared to macaque parcels. Functional parcellation revealed that the human striatum was split into dorsal, dorsomedial, and rostral caudate and ventral, central, and caudal putamen, while the macaque striatum was divided into dorsal, and rostral caudate and rostral, and caudal putamen. Cross-species comparison indicated dissimilar cortico-striatal RSFC of the topographically similar dorsal caudate. We probed clinical relevance of the striatal clusters by examining differences in their cortico-striatal RSFC and gray matter (GM) volume between patients (with PD and SCZ) and healthy controls. We found abnormal RSFC not only between dorsal caudate, but also between rostral caudate, ventral, central and caudal putamen and widespread cortical regions for both PD and SCZ patients. Also, we observed significant structural atrophy in rostral caudate, ventral and central putamen for both PD and SCZ while atrophy in the dorsal caudate was specific to PD. Taken together, our cross-species comparative results revealed shared and human-specific RSFC of different striatal clusters reinforcing the complex organization and function of the striatum. In addition, we provided a testable hypothesis that abnormalities in a region with human-specific connectivity, i.e., dorsal caudate, might be associated with neuropsychiatric disorders.

Disciplines :

Neurosciences & behavior

Author, co-author :

Liu, Xiaojin

Eickhoff, Simon B.

Caspers, Svenja

Wu, Jianxiao

Genon, Sarah ; Université de Liège - ULiège > Département des sciences cliniques > Neuroimagerie des troubles de la mémoire et revalid. cogn.

Hoffstaedter, Felix

Mars, Rogier B.

Sommer, Iris E.

Eickhoff, Claudia R.

Chen, Ji

More authors (9 more)

Language :

English

Title :

Functional parcellation of human and macaque striatum reveals human-specific connectivity in the dorsal caudate.

Publication date :

2021

Journal title :

NeuroImage

ISSN :

1053-8119

eISSN :

1095-9572

Publisher :

Elsevier, Amsterdam, Netherlands

Pages :

118006

Peer reviewed :

Peer Reviewed verified by ORBi

Commentary :

Available on ORBi :

since 12 April 2021

Statistics

Number of views

65 (1 by ULiège)

Number of downloads

60 (2 by ULiège)

More statistics

Scopus citations^®

Scopus citations^®
without self-citations

OpenCitations

OpenAlex citations

Bibliography

Alexander, G.E., Crutcher, M.D., Functional architecture of basal ganglia circuits: neural substrates of parallel processing. Trends Neurosci. 13 (1990), 266–271.
Alexander, G.E., DeLong, M.R., Strick, P.L., Parallel organization of functionally segregated circuits linking basal ganglia and cortex. Annu. Rev. Neurosci. 9 (1986), 357–381.
Anderson, K.M., Krienen, F.M., Choi, E.Y., Reinen, J.M., Yeo, B.T., Holmes, A.J., Gene expression links functional networks across cortex and striatum. Nat. Commun. 9 (2018), 1–14.
Apicella, P., Ravel, S., Deffains, M., Legallet, E., The role of striatal tonically active neurons in reward prediction error signaling during instrumental task performance. J. Neurosci. 31 (2011), 1507–1515.
Arslan, S., Ktena, S.I., Makropoulos, A., Robinson, E.C., Rueckert, D., Parisot, S., Human brain mapping: a systematic comparison of parcellation methods for the human cerebral cortex. Neuroimage 170 (2018), 5–30.
Ashburner, J., Friston, K.J., Unified segmentation. Neuroimage 26 (2005), 839–851.
Bakken, T.E., Miller, J.A., Ding, S.-.L., Sunkin, S.M., Smith, K.A., Ng, L., Szafer, A., Dalley, R.A., Royall, J.J., Lemon, T., A comprehensive transcriptional map of primate brain development. Nature 535 (2016), 367–375.
Balleine, B.W., Delgado, M.R., Hikosaka, O., The role of the dorsal striatum in reward and decision-making. J. Neurosci. 27 (2007), 8161–8165.
Balsters, J.H., Zerbi, V., Sallet, J., Wenderoth, N., Mars, R.B., Primate homologs of mouse cortico-striatal circuits. Elife, 9, 2020, e53680.
Barger, N., Hanson, K.L., Teffer, K., Schenker-Ahmed, N.M., Semendeferi, K., Evidence for evolutionary specialization in human limbic structures. Front. Hum. Neurosci., 8, 2014, 277.
Barnes, K.A., Cohen, A.L., Power, J.D., Nelson, S.M., Dosenbach, Y.B., Miezin, F.M., Petersen, S.E., Schlaggar, B.L., Identifying basal ganglia divisions in individuals using resting-state functional connectivity MRI. Front. Syst. Neurosci., 4, 2010, 18.
Betarbet, R., Turner, R., Chockkan, V., DeLong, M.R., Allers, K.A., Walters, J., Levey, A.I., Greenamyre, J.T., Dopaminergic neurons intrinsic to the primate striatum. J. Neurosci. 17 (1997), 6761–6768.
Biswal, B.B., Mennes, M., Zuo, X.-.N., Gohel, S., Kelly, C., Smith, S.M., Beckmann, C.F., Adelstein, J.S., Buckner, R.L., Colcombe, S., Toward discovery science of human brain function. Proc. Natl. Acad. Sci. 107 (2010), 4734–4739.
Bonelli, R.M., Cummings, J.L., Frontal-subcortical circuitry and behavior. Dialogues Clin. Neurosci., 9, 2007, 141.
Brück, A., Aalto, S., Nurmi, E., Vahlberg, T., Bergman, J., Rinne, J.O., Striatal subregional 6-[18F] fluoro-L-dopa uptake in early Parkinson's disease: a two-year follow-up study. Movement disord.: Off. J. Movement Disord. Soc. 21 (2006), 958–963.
Burton, A.C., Nakamura, K., Roesch, M.R., From ventral-medial to dorsal-lateral striatum: neural correlates of reward-guided decision-making. Neurobiol. Learn. Mem. 117 (2015), 51–59.
Calhoun, V.D., Wager, T.D., Krishnan, A., Rosch, K.S., Seymour, K.E., Nebel, M.B., Mostofsky, S.H., Nyalakanai, P., Kiehl, K., The impact of T1 versus EPI spatial normalization templates for fMRI data analyses. Hum. Brain Mapp. 38 (2017), 5331–5342.
Calzavara, R., Mailly, P., Haber, S.N., Relationship between the corticostriatal terminals from areas 9 and 46, and those from area 8A, dorsal and rostral premotor cortex and area 24c: an anatomical substrate for cognition to action. Eur. J. Neurosci. 26 (2007), 2005–2024.
Carlén, M., What constitutes the prefrontal cortex?. Science 358 (2017), 478–482.
Castner, S.A., Goldman-Rakic, P.S., Williams, G.V., Animal models of working memory: insights for targeting cognitive dysfunction in schizophrenia. Psychopharmacology (Berl.) 174 (2004), 111–125.
Cenci, M.A., Crossman, A.R., Animal models of l-dopa-induced dyskinesia in Parkinson's disease. Mov. Disord. 33 (2018), 889–899.
Chase, H.W., Grace, A.A., Fox, P.T., Phillips, M.L., Eickhoff, S.B., Functional differentiation in the human ventromedial frontal lobe: a data-driven parcellation. Hum. Brain Mapp., 2020.
Chen, J., Müller, V.I., Dukart, J., Hoffstaedter, F., Baker, J.T., Holmes, A.J., Vatansever, D., Nickl-Jockschat, T., Liu, X., Derntl, B., Kogler, L., Jardri, R., Gruber, O., Aleman, A., Sommer, I.E., Eickhoff, S.B., Patil, K.R., Intrinsic connectivity patterns of task-defined brain networks allow individual prediction of cognitive symptom dimension of schizophrenia and are linked to molecular architecture. Biol. Psychiatry, 2020.
Chen, J., Patil, K.R., Weis, S., Sim, K., Nickl-Jockschat, T., Zhou, J., Aleman, A., Sommer, I.E., Liemburg, E.J., Hoffstaedter, F., Neurobiological divergence of the positive and negative schizophrenia subtypes identified on a new factor structure of psychopathology using non-negative factorization: an international machine learning study. Biol. Psychiatry 87 (2020), 282–293.
Choi, E.Y., Yeo, B.T., Buckner, R.L., The organization of the human striatum estimated by intrinsic functional connectivity. J. Neurophysiol. 108 (2012), 2242–2263.
Choi, Y., Shin, E.Y., Kim, S., Spatiotemporal dissociation of fMRI activity in the caudate nucleus underlies human de novo motor skill learning. Proc. Natl. Acad. Sci. 117 (2020), 23886–23897.
Choudhury, G.R., Daadi, M.M., Charting the onset of Parkinson-like motor and non-motor symptoms in nonhuman primate model of Parkinson's disease. PLoS ONE, 13, 2018, e0202770.
Clos, M., Diederen, K.M., Meijering, A.L., Sommer, I.E., Eickhoff, S.B., Aberrant connectivity of areas for decoding degraded speech in patients with auditory verbal hallucinations. Brain Struct. Funct. 219 (2014), 581–594.
Craddock, R.C., James, G.A., Holtzheimer, P.E. III, Hu, X.P., Mayberg, H.S., A whole brain fMRI atlas generated via spatially constrained spectral clustering. Hum. Brain Mapp. 33 (2012), 1914–1928.
Crippa, A., Cerliani, L., Nanetti, L., Roerdink, J.B., Heuristics for connectivity-based brain parcellation of SMA/pre-SMA through force-directed graph layout. Neuroimage 54 (2011), 2176–2184.
de Boer, J., van Hoogdalem, M., Mandl, R., Brummelman, J., Voppel, A., Begemann, M., van Dellen, E., Wijnen, F., Sommer, I., Language in schizophrenia: relation with diagnosis, symptomatology and white matter tracts. NPJ Schizophr. 6 (2020), 1–10.
de Schotten, M.T., Croxson, P.L., Mars, R.B., Large-scale comparative neuroimaging: where are we and what do we need?. Cortex 118 (2019), 188–202.
Dohmatob, E., Varoquaux, G., Thirion, B., Inter-subject registration of functional images: do we need anatomical images?. Front. Neurosci., 12, 2018, 64.
Doi, T., Fan, Y., Gold, J.I., Ding, L., The caudate nucleus contributes causally to decisions that balance reward and uncertain visual information. Elife, 9, 2020, e56694.
du Plessis, S., Bossert, M., Vink, M., van den Heuvel, L., Bardien, S., Emsley, R., Buckle, C., Seedat, S., Carr, J., Reward processing dysfunction in ventral striatum and orbitofrontal cortex in Parkinson's disease. Parkinsonism Relat. Disord. 48 (2018), 82–88.
Eickhoff, S.B., Thirion, B., Varoquaux, G., Bzdok, D., Connectivity-based parcellation: critique and implications. Hum. Brain Mapp. 36 (2015), 4771–4792.
Eickhoff, S.B., Yeo, B.T., Genon, S., Imaging-based parcellations of the human brain. Nat. Rev. Neurosci. 19 (2018), 672–686.
Ell, S.W., Helie, S., Hutchinson, S., Costa, A., Villalba, E., Contributions of the putamen to cognitive function. Horiz. Neurosci. Res., 2011, 29–52.
Fatemi, S.H., Folsom, T.D., The neurodevelopmental hypothesis of schizophrenia, revisited. Schizophr. Bull. 35 (2009), 528–548.
Ferry, A.T., Öngür, D., An, X., Price, J.L., Prefrontal cortical projections to the striatum in macaque monkeys: evidence for an organization related to prefrontal networks. J. Comp. Neurol. 425 (2000), 447–470.
Friedman, J., Hastie, T., Tibshirani, R., The Elements of Statistical Learning. 2001, Springer series in statistics New York.
Friedrich, P., Imaging the primate brain evolution: the next frontier?. Neuroimage, 2021.
Garcia-Garcia, M., Nikolaidis, A., Bellec, P., Craddock, R.C., Cheung, B., Castellanos, F.X., Milham, M.P., Detecting stable individual differences in the functional organization of the human basal ganglia. Neuroimage 170 (2018), 68–82.
Gaser, C., Nenadic, I., Buchsbaum, B.R., Hazlett, E.A., Buchsbaum, M.S., Ventricular enlargement in schizophrenia related to volume reduction of the thalamus, striatum, and superior temporal cortex. Am. J. Psychiatry 161 (2004), 154–156.
Genon, S., Reid, A., Li, H., Fan, L., Müller, V.I., Cieslik, E.C., Hoffstaedter, F., Langner, R., Grefkes, C., Laird, A.R., The heterogeneity of the left dorsal premotor cortex evidenced by multimodal connectivity-based parcellation and functional characterization. Neuroimage 170 (2018), 400–411.
Glasser, M.F., Sotiropoulos, S.N., Wilson, J.A., Coalson, T.S., Fischl, B., Andersson, J.L., Xu, J., Jbabdi, S., Webster, M., Polimeni, J.R., The minimal preprocessing pipelines for the human connectome project. Neuroimage 80 (2013), 105–124.
Goldman, P.S., Nauta, W.J., An intricately patterned prefronto-caudate projection in the rhesus monkey. J. Comp. Neurol. 171 (1977), 369–385.
Goulas, A., Bastiani, M., Bezgin, G., Uylings, H.B., Roebroeck, A., Stiers, P., Comparative analysis of the macroscale structural connectivity in the macaque and human brain. PLoS Comput. Biol., 10, 2014, e1003529.
Grahn, J.A., Parkinson, J.A., Owen, A.M., The cognitive functions of the caudate nucleus. Prog. Neurobiol. 86 (2008), 141–155.
Guttman, M., Burkholder, J., Kish, S., Hussey, D., Wilson, A., DaSilva, J., Houle, S., [11C] RTI-32 PET studies of the dopamine transporter in early dopa-naive Parkinson's disease: implications for the symptomatic threshold. Neurology 48 (1997), 1578–1583.
Haber, S.N., The primate basal ganglia: parallel and integrative networks. J. Chem. Neuroanat. 26 (2003), 317–330.
Haber, S.N., Kim, K.-.S., Mailly, P., Calzavara, R., Reward-related cortical inputs define a large striatal region in primates that interface with associative cortical connections, providing a substrate for incentive-based learning. J. Neurosci. 26 (2006), 8368–8376.
Haber, S.N., Knutson, B., The reward circuit: linking primate anatomy and human imaging. Neuropsychopharmacology 35 (2010), 4–26.
Hanganu, A., Bedetti, C., Degroot, C., Mejia-Constain, B., Lafontaine, A.-.L., Soland, V., Chouinard, S., Bruneau, M.-.A., Mellah, S., Belleville, S., Mild cognitive impairment is linked with faster rate of cortical thinning in patients with Parkinson's disease longitudinally. Brain 137 (2014), 1120–1129.
Hardman, C.D., Henderson, J.M., Finkelstein, D.I., Horne, M.K., Paxinos, G., Halliday, G.M., Comparison of the basal ganglia in rats, marmosets, macaques, baboons, and humans: volume and neuronal number for the output, internal relay, and striatal modulating nuclei. J. Comp. Neurol. 445 (2002), 238–255.
Hartwigsen, G., Neef, N.E., Camilleri, J.A., Margulies, D.S., Eickhoff, S.B., Functional segregation of the right inferior frontal gyrus: evidence from coactivation-based parcellation. Cereb. Cortex 29 (2019), 1532–1546.
Hassani, O.K., Cromwell, H.C., Schultz, W., Influence of expectation of different rewards on behavior-related neuronal activity in the striatum. J. Neurophysiol. 85 (2001), 2477–2489.
He, Z., Sheng, W., Lu, F., Long, Z., Han, S., Pang, Y., Chen, Y., Luo, W., Yu, Y., Nan, X., Altered resting-state cerebral blood flow and functional connectivity of striatum in bipolar disorder and major depressive disorder. Prog. Neuropsychopharmacol. Biol. Psychiatry 90 (2019), 177–185.
Helmich, R.C., Derikx, L.C., Bakker, M., Scheeringa, R., Bloem, B.R., Toni, I., Spatial remapping of cortico-striatal connectivity in Parkinson's disease. Cereb. Cortex 20 (2010), 1175–1186.
Henderson, J.M., Human gaze control during real-world scene perception. Trends Cogn. Sci. 7 (2003), 498–504.
Heuer, K., Gulban, O.F., Bazin, P.-.L., Osoianu, A., Valabregue, R., Santin, M., Herbin, M., Toro, R., Evolution of neocortical folding: a phylogenetic comparative analysis of MRI from 34 primate species. Cortex 118 (2019), 275–291.
Hiebert, N.M., Owen, A.M., Seergobin, K.N., MacDonald, P.A., Dorsal striatum mediates deliberate decision making, not late-stage, stimulus–response learning. Hum. Brain Mapp. 38 (2017), 6133–6156.
Hikosaka, O., Kim, H.F., Yasuda, M., Yamamoto, S., Basal ganglia circuits for reward value–guided behavior. Annu. Rev. Neurosci. 37 (2014), 289–306.
Hikosaka, O., Sakamoto, M., Usui, S., Functional properties of monkey caudate neurons. III. Activities related to expectation of target and reward. J. Neurophysiol. 61 (1989), 814–832.
Histed, M.H., Pasupathy, A., Miller, E.K., Learning substrates in the primate prefrontal cortex and striatum: sustained activity related to successful actions. Neuron 63 (2009), 244–253.
Hollerman, J.R., Tremblay, L., Schultz, W., Influence of reward expectation on behavior-related neuronal activity in primate striatum. J. Neurophysiol. 80 (1998), 947–963.
Hou, Y., Luo, C., Yang, J., Song, W., Ou, R., Liu, W., Gong, Q., Shang, H., A resting-state fMRI study on early-stage drug-naïve Parkinson's disease patients with drooling. Neurosci. Lett. 634 (2016), 119–125.
Howes, O.D., Kapur, S., The dopamine hypothesis of schizophrenia: version III—the final common pathway. Schizophr. Bull. 35 (2009), 549–562.
Janssen, R.J., Jylänki, P., Kessels, R.P., van Gerven, M.A., Probabilistic model-based functional parcellation reveals a robust, fine-grained subdivision of the striatum. Neuroimage 119 (2015), 398–405.
Jaspers, E., Balsters, J.H., Kassraian Fard, P., Mantini, D., Wenderoth, N., Corticostriatal connectivity fingerprints: probability maps based on resting-state functional connectivity. Hum. Brain Mapp. 38 (2017), 1478–1491.
Johns, P., Clinical Neuroscience E-Book. 2014, Elsevier Health Sciences.
Johnson, T.N., Rosvold, H.E., Mishkin, M., Projections from behaviorally-defined sectors of the prefrontal cortex to the basal ganglia, septum, and diencephalon of the monkey. Exp. Neurol. 21 (1968), 20–34.
Juckel, G., Schlagenhauf, F., Koslowski, M., Wüstenberg, T., Villringer, A., Knutson, B., Wrase, J., Heinz, A., Dysfunction of ventral striatal reward prediction in schizophrenia. Neuroimage 29 (2006), 409–416.
Jung, W.H., Jang, J.H., Park, J.W., Kim, E., Goo, E.-.H., Im, O.-.S., Kwon, J.S., Unravelling the intrinsic functional organization of the human striatum: a parcellation and connectivity study based on resting-state FMRI. PLoS ONE, 9, 2014, e106768.
Kapur, S., Psychosis as a state of aberrant salience: a framework linking biology, phenomenology, and pharmacology in schizophrenia. Am. J. Psychiatry 160 (2003), 13–23.
Kemp, J.M., Powell, T., The cortico-striate projection in the monkey. Brain 93 (1970), 525–546.
Kim, D.J., Park, B., Park, H.J., Functional connectivity-based identification of subdivisions of the basal ganglia and thalamus using multilevel independent component analysis of resting state fMRI. Hum. Brain Mapp. 34 (2013), 1371–1385.
Kirino, E., Tanaka, S., Fukuta, M., Inami, R., Inoue, R., Aoki, S., Functional connectivity of the caudate in schizophrenia evaluated with simultaneous resting-state functional MRI and electroencephalography recordings. Neuropsychobiology 77 (2019), 165–175.
Kish, S.J., Shannak, K., Hornykiewicz, O., Uneven pattern of dopamine loss in the striatum of patients with idiopathic Parkinson's disease. N. Engl. J. Med. 318 (1988), 876–880.
Kötter, R., Wanke, E., Mapping brains without coordinates. Philos. Trans. R. Soc. B: Biol. Sci. 360 (2005), 751–766.
Krubitzer, L., Kaas, J., The evolution of the neocortex in mammals: how is phenotypic diversity generated?. Curr. Opin. Neurobiol. 15 (2005), 444–453.
Künzle, H., Bilateral projections from precentral motor cortex to the putamen and other parts of the basal ganglia. An autoradiographic study inMacaca fascicularis. Brain Res. 88 (1975), 195–209.
Künzle, H., An autoradiographic analysis of the efferent connections from premotor and adjacent prefrontal regions (areas 6 and 9) in Macaca fascicularis; pp. 210–234. Brain Behav. Evol. 15 (1978), 210–234.
Lefebvre, S., Demeulemeester, M., Leroy, A., Delmaire, C., Lopes, R., Pins, D., Thomas, P., Jardri, R., Network dynamics during the different stages of hallucinations in schizophrenia. Hum. Brain Mapp. 37 (2016), 2571–2586.
Leh, S.E., Ptito, A., Chakravarty, M.M., Strafella, A.P., Fronto-striatal connections in the human brain: a probabilistic diffusion tractography study. Neurosci. Lett. 419 (2007), 113–118.
Lewis, M.M., Du, G., Lee, E.-.Y., Nasralah, Z., Sterling, N.W., Zhang, L., Wagner, D., Kong, L., Tröster, A.I., Styner, M., The pattern of gray matter atrophy in Parkinson's disease differs in cortical and subcortical regions. J. Neurol. 263 (2016), 68–75.
Li, A., Zalesky, A., Yue, W., Howes, O., Yan, H., Liu, Y., Fan, L., Whitaker, K.J., Xu, K., Rao, G., A neuroimaging biomarker for striatal dysfunction in schizophrenia. Nat. Med. 26 (2020), 558–565.
Liu, X., Eickhoff, S.B., Hoffstaedter, F., Genon, S., Caspers, S., Reetz, K., Dogan, I., Eickhoff, C.R., Chen, J., Caspers, J., Reuter, N., Mathys, C., Aleman, A., Jardri, R., Riedl, V., Sommer, I.E., Patil, K.R., Joint multi-modal parcellation of the human striatum: functions and clinical relevance. Neurosci. Bull. Accept., 2020.
Lohrenz, T., Kishida, K.T., Montague, P.R., BOLD and its connection to dopamine release in human striatum: a cross-cohort comparison. Philos. Trans. R. Soc. B: Biol. Sci., 371, 2016, 20150352.
Luo, C., Song, W., Chen, Q., Zheng, Z., Chen, K., Cao, B., Yang, J., Li, J., Huang, X., Gong, Q., Reduced functional connectivity in early-stage drug-naive Parkinson's disease: a resting-state fMRI study. Neurobiol. Aging 35 (2014), 431–441.
Marchand, W.R., Lee, J.N., Thatcher, J.W., Hsu, E.W., Rashkin, E., Suchy, Y., Chelune, G., Starr, J., Barbera, S.S., Putamen coactivation during motor task execution. Neuroreport 19 (2008), 957–960.
Marquand, A.F., Haak, K.V., Beckmann, C.F., Functional corticostriatal connection topographies predict goal-directed behaviour in humans. Nat. Hum. Behav. 1 (2017), 1–9.
Mars, R.B., Jbabdi, S., Sallet, J., O'Reilly, J.X., Croxson, P.L., Olivier, E., Noonan, M.P., Bergmann, C., Mitchell, A.S., Baxter, M.G., Diffusion-weighted imaging tractography-based parcellation of the human parietal cortex and comparison with human and macaque resting-state functional connectivity. J. Neurosci. 31 (2011), 4087–4100.
Mars, R.B., Sotiropoulos, S.N., Passingham, R.E., Sallet, J., Verhagen, L., Khrapitchev, A.A., Sibson, N., Jbabdi, S., Whole brain comparative anatomy using connectivity blueprints. Elife, 7, 2018, e35237.
Mayer, A.R., Ruhl, D., Merideth, F., Ling, J., Hanlon, F.M., Bustillo, J., Cañive, J., Functional imaging of the hemodynamic sensory gating response in schizophrenia. Hum. Brain Mapp. 34 (2013), 2302–2312.
McCutcheon, R.A., Abi-Dargham, A., Howes, O.D., Schizophrenia, dopamine and the striatum: from biology to symptoms. Trends Neurosci. 42 (2019), 205–220.
Milham, M., Petkov, C.I., Margulies, D.S., Schroeder, C.E., Basso, M.A., Belin, P., Fair, D.A., Fox, A., Kastner, S., Mars, R.B., Accelerating the evolution of nonhuman primate neuroimaging. Neuron 105 (2020), 600–603.
Milham, M.P., Ai, L., Koo, B., Xu, T., Amiez, C., Balezeau, F., Baxter, M.G., Blezer, E.L., Brochier, T., Chen, A., An open resource for non-human primate imaging. Neuron 100 (2018), 61–74 e62.
Miranda-Dominguez, O., Mills, B.D., Grayson, D., Woodall, A., Grant, K.A., Kroenke, C.D., Fair, D.A., Bridging the gap between the human and macaque connectome: a quantitative comparison of global interspecies structure-function relationships and network topology. J. Neurosci. 34 (2014), 5552–5563.
Moerel, M., De Martino, F., Formisano, E., An anatomical and functional topography of human auditory cortical areas. Front. Neurosci., 8, 2014, 225.
Mucci, A., Dima, D., Soricelli, A., Volpe, U., Bucci, P., Frangou, S., Prinster, A., Salvatore, M., Galderisi, S., Maj, M., Is avolition in schizophrenia associated with a deficit of dorsal caudate activity? A functional magnetic resonance imaging study during reward anticipation and feedback. Psychol. Med. 45 (2015), 1765–1778.
Nakano, K., Kayahara, T., Tsutsumi, T., Ushiro, H., Neural circuits and functional organization of the striatum. J. Neurol. 247 (2000), V1–V15.
Nanetti, L., Cerliani, L., Gazzola, V., Renken, R., Keysers, C., Group analyses of connectivity-based cortical parcellation using repeated k-means clustering. Neuroimage 47 (2009), 1666–1677.
Neggers, S.F., Zandbelt, B.B., Schall, M.S., Schall, J.D., Comparative diffusion tractography of corticostriatal motor pathways reveals differences between humans and macaques. J. Neurophysiol. 113 (2015), 2164–2172.
Neubert, F.-.X., Mars, R.B., Sallet, J., Rushworth, M.F., Connectivity reveals relationship of brain areas for reward-guided learning and decision making in human and monkey frontal cortex. Proc. Natl. Acad. Sci. 112 (2015), E2695–E2704.
Nikolaidis, A., Heinsfeld, A.S., Xu, T., Bellec, P., Vogelstein, J., Milham, M., Bagging improves reproducibility of functional parcellation of the human brain. Neuroimage, 214, 2020, 116678.
O'Doherty, J., Dayan, P., Schultz, J., Deichmann, R., Friston, K., Dolan, R.J., Dissociable roles of ventral and dorsal striatum in instrumental conditioning. Science 304 (2004), 452–454.
Owen, A., James, M., Leigh, P., Summers, B., Marsden, C., Quinn, N.a., Lange, K.W., Robbins, T., Fronto-striatal cognitive deficits at different stages of Parkinson's disease. Brain 115 (1992), 1727–1751.
Pauli, W.M., O'Reilly, R.C., Yarkoni, T., Wager, T.D., Regional specialization within the human striatum for diverse psychological functions. Proc. Natl. Acad. Sci. 113 (2016), 1907–1912.
Plachti, A., Eickhoff, S., Hoffstaedter, F., Patil, K., Laird, A., Fox, P., Amunts, K., Genon, S., Multimodal parcellations and extensive behavioral profiling tackling the hippocampus gradient. Cereb. Cortex 29 (2019), 4595–4612.
Plachti, A., Eickhoff, S.B., Hoffstaedter, F., Patil, K.R., Laird, A.R., Fox, P.T., Amunts, K., Genon, S., Multimodal parcellations and extensive behavioral profiling tackling the hippocampus gradient. Cereb. Cortex 29 (2019), 4595–4612.
Pläschke, R.N., Cieslik, E.C., Müller, V.I., Hoffstaedter, F., Plachti, A., Varikuti, D.P., Goosses, M., Latz, A., Caspers, S., Jockwitz, C., On the integrity of functional brain networks in schizophrenia, Parkinson's disease, and advanced age: evidence from connectivity-based single-subject classification. Hum. Brain Mapp. 38 (2017), 5845–5858.
Pryluk, R., Kfir, Y., Gelbard-Sagiv, H., Fried, I., Paz, R., A tradeoff in the neural code across regions and species. Cell 176 (2019), 597–609 e518.
Qiu, P., Jiang, J., Liu, Z., Cai, Y., Huang, T., Wang, Y., Liu, Q., Nie, Y., Liu, F., Cheng, J., BMAL1 knockout macaque monkeys display reduced sleep and psychiatric disorders. Natl. Sci. Rev. 6 (2019), 87–100.
Raghanti, M.A., Edler, M.K., Stephenson, A.R., Wilson, L.J., Hopkins, W.D., Ely, J.J., Erwin, J.M., Jacobs, B., Hof, P.R., Sherwood, C.C., Human-specific increase of dopaminergic innervation in a striatal region associated with speech and language: a comparative analysis of the primate basal ganglia. J. Comp. Neurol. 524 (2016), 2117–2129.
Ray, K.L., Zald, D.H., Bludau, S., Riedel, M.C., Bzdok, D., Yanes, J., Falcone, K., Amunts, K., Fox, P.T., Eickhoff, S.B., Co-activation based parcellation of the human frontal pole. Neuroimage 123 (2015), 200–211.
Reid, A.T., Lewis, J., Bezgin, G., Khundrakpam, B., Eickhoff, S.B., McIntosh, A.R., Bellec, P., Evans, A.C., A cross-modal, cross-species comparison of connectivity measures in the primate brain. Neuroimage 125 (2016), 311–331.
Reuter, N., Genon, S., Masouleh, S.K., Hoffstaedter, F., Liu, X., Kalenscher, T., Eickhoff, S.B., Patil, K.R., CBPtools: a Python package for regional connectivity-based parcellation. Brain Struct. Funct., 2020, 1–15.
Rilling, J.K., Comparative primate neuroimaging: insights into human brain evolution. Trends Cogn. Sci. 18 (2014), 46–55.
Robinson, J.L., Laird, A.R., Glahn, D.C., Blangero, J., Sanghera, M.K., Pessoa, L., Fox, P.M., Uecker, A., Friehs, G., Young, K.A., The functional connectivity of the human caudate: an application of meta-analytic connectivity modeling with behavioral filtering. Neuroimage 60 (2012), 117–129.
Rodriguez-Oroz, M.C., Jahanshahi, M., Krack, P., Litvan, I., Macias, R., Bezard, E., Obeso, J.A., Initial clinical manifestations of Parkinson's disease: features and pathophysiological mechanisms. Lancet Neurol. 8 (2009), 1128–1139.
Rohlfing, T., Kroenke, C.D., Sullivan, E.V., Dubach, M.F., Bowden, D.M., Grant, K., Pfefferbaum, A., The INIA19 template and NeuroMaps atlas for primate brain image parcellation and spatial normalization. Front. Neuroinform., 6, 2012, 27.
Salvador, R., Sarró, S., Gomar, J.J., Ortiz-Gil, J., Vila, F., Capdevila, A., Bullmore, E., McKenna, P.J., Pomarol-Clotet, E., Overall brain connectivity maps show cortico-subcortical abnormalities in schizophrenia. Hum. Brain Mapp. 31 (2010), 2003–2014.
Samuel, M., Ceballos-Baumann, A., Blin, J., Uema, T., Boecker, H., Passingham, R., Brooks, D., Evidence for lateral premotor and parietal overactivity in Parkinson's disease during sequential and bimanual movements. A PET study. Brain: J. Neurol. 120 (1997), 963–976.
Santos, L.R., Rosati, A.G., The evolutionary roots of human decision making. Annu. Rev. Psychol. 66 (2015), 321–347.
Satterthwaite, T.D., Elliott, M.A., Gerraty, R.T., Ruparel, K., Loughead, J., Calkins, M.E., Eickhoff, S.B., Hakonarson, H., Gur, R.C., Gur, R.E., An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data. Neuroimage 64 (2013), 240–256.
Schaefer, A., Kong, R., Gordon, E.M., Laumann, T.O., Zuo, X.-.N., Holmes, A.J., Eickhoff, S.B., Yeo, B.T., Local-global parcellation of the human cerebral cortex from intrinsic functional connectivity MRI. Cereb. Cortex 28 (2018), 3095–3114.
Selemon, L., Goldman-Rakic, P., Longitudinal topography and interdigitation of corticostriatal projections in the rhesus monkey. J. Neurosci. 5 (1985), 776–794.
Sheinberg, D.L., Logothetis, N.K., Noticing familiar objects in real world scenes: the role of temporal cortical neurons in natural vision. J. Neurosci. 21 (2001), 1340–1350.
Simpson, E.H., Kellendonk, C., Kandel, E., A possible role for the striatum in the pathogenesis of the cognitive symptoms of schizophrenia. Neuron 65 (2010), 585–596.
Smaers, J.B., Gómez-Robles, A., Parks, A.N., Sherwood, C.C., Exceptional evolutionary expansion of prefrontal cortex in great apes and humans. Curr. Biol. 27 (2017), 714–720.
Smeets, W.J., Marin, O., Gonzalez, A., Evolution of the basal ganglia: new perspectives through a comparative approach. J. Anat. 196 (2000), 501–517.
Sousa, A.M., Zhu, Y., Raghanti, M.A., Kitchen, R.R., Onorati, M., Tebbenkamp, A.T., Stutz, B., Meyer, K.A., Li, M., Kawasawa, Y.I., Molecular and cellular reorganization of neural circuits in the human lineage. Science 358 (2017), 1027–1032.
Stephens, B., Mueller, A., Shering, A., Hood, S., Taggart, P., Arbuthnott, G., Bell, J., Kilford, L., Kingsbury, A., Daniel, S., Evidence of a breakdown of corticostriatal connections in Parkinson's disease. Neuroscience 132 (2005), 741–754.
Thirion, B., Varoquaux, G., Dohmatob, E., Poline, J.-.B., Which fMRI clustering gives good brain parcellations?. Front. Neurosci., 8, 2014, 167.
Tian, Y., Margulies, D.S., Breakspear, M., Zalesky, A., Hierarchical organization of the human subcortex unveiled with functional connectivity gradients. bioRxiv, 2020.
Tziortzi, A.C., Haber, S.N., Searle, G.E., Tsoumpas, C., Long, C.J., Shotbolt, P., Douaud, G., Jbabdi, S., Behrens, T.E., Rabiner, E.A., Connectivity-based functional analysis of dopamine release in the striatum using diffusion-weighted MRI and positron emission tomography. Cereb. Cortex 24 (2014), 1165–1177.
Van den Heuvel, M.P., Bullmore, E.T., Sporns, O., Comparative connectomics. Trends Cogn. Sci. 20 (2016), 345–361.
Van Den Heuvel, M.P., Pol, H.E.H., Exploring the brain network: a review on resting-state fMRI functional connectivity. Eur. Neuropsychopharmacol. 20 (2010), 519–534.
van den Heuvel, M.P., Scholtens, L.H., Barrett, L.F., Hilgetag, C.C., de Reus, M.A., Bridging cytoarchitectonics and connectomics in human cerebral cortex. J. Neurosci. 35 (2015), 13943–13948.
van den Heuvel, M.P., Scholtens, L.H., de Lange, S.C., Pijnenburg, R., Cahn, W., van Haren, N.E., Sommer, I.E., Bozzali, M., Koch, K., Boks, M.P., Evolutionary modifications in human brain connectivity associated with schizophrenia. Brain 142 (2019), 3991–4002.
Van Essen, D.C., Ugurbil, K., Auerbach, E., Barch, D., Behrens, T., Bucholz, R., Chang, A., Chen, L., Corbetta, M., Curtiss, S.W., The human connectome project: a data acquisition perspective. Neuroimage 62 (2012), 2222–2231.
Vanduffel, W., Zhu, Q., Orban, G.A., Monkey cortex through fMRI glasses. Neuron 83 (2014), 533–550.
Vercammen, A., Knegtering, H., den Boer, J.A., Liemburg, E.J., Aleman, A., Auditory hallucinations in schizophrenia are associated with reduced functional connectivity of the temporo-parietal area. Biol. Psychiatry 67 (2010), 912–918.
Watanabe, K., Lauwereyns, J., Hikosaka, O., Neural correlates of rewarded and unrewarded eye movements in the primate caudate nucleus. J. Neurosci. 23 (2003), 10052–10057.
Xia, X., Fan, L., Cheng, C., Yao, R., Deng, H., Zhao, D., Li, H., Jiang, T., Interspecies differences in the connectivity of ventral striatal components between humans and macaques. Front. Neurosci., 13, 2019, 623.
Xu, J., Wang, C., Xu, Z., Li, T., Chen, F., Chen, K., Gao, J., Wang, J., Hu, Q., Specific functional connectivity patterns of middle temporal gyrus subregions in children and adults with autism spectrum disorder. Autism Res. 13 (2020), 410–422.
Xu, J., Zhang, J., Wang, J., Li, G., Hu, Q., Zhang, Y., Abnormal fronto-striatal functional connectivity in Parkinson's disease. Neurosci. Lett. 613 (2016), 66–71.
Xu, T., Deep learning-based skull extraction. Neuroimage, 2021.
Xu, T., Nenning, K.-.H., Schwartz, E., Hong, S.-.J., Vogelstein, J.T., Goulas, A., Fair, D.A., Schroeder, C.E., Margulies, D.S., Smallwood, J., Cross-species functional alignment reveals evolutionary hierarchy within the connectome. Neuroimage, 223, 2020, 117346.
Xu, T., Sturgeon, D., Ramirez, J.S., Froudist-Walsh, S., Margulies, D.S., Schroeder, C.E., Fair, D.A., Milham, M.P., Interindividual variability of functional connectivity in awake and anesthetized rhesus macaque monkeys. Biol. Psychiatry: Cogn. Neurosci. Neuroimaging 4 (2019), 543–553.
Yarbus, A.L., Eye Movements and Vision. 2013, Springer.
Yeo, B.T., Krienen, F.M., Sepulcre, J., Sabuncu, M.R., Lashkari, D., Hollinshead, M., Roffman, J.L., Smoller, J.W., Zöllei, L., Polimeni, J.R., The organization of the human cerebral cortex estimated by intrinsic functional connectivity. J. Neurophysiol., 2011.
Yeterian, E.H., Pandya, D.N., Prefrontostriatal connections in relation to cortical architectonic organization in rhesus monkeys. J. Comp. Neurol. 312 (1991), 43–67.
Yeterian, E.H., Van Hoesen, G.W., Cortico-striate projections in the rhesus monkey: the organization of certain cortico-caudate connections. Brain Res. 139 (1978), 43–63.
Zhai, S., Tanimura, A., Graves, S.M., Shen, W., Surmeier, D.J., Striatal synapses, circuits, and Parkinson's disease. Curr. Opin. Neurobiol. 48 (2018), 9–16.