Article (Scientific journals)
Intraspecific differentiation: Implications for niche and distribution modelling
Collart, Flavien; Hedenäs, Lars; Brönnimann, Olivier et al.
2021 • In Journal of Biogeography, 48, p. 415-426
Peer Reviewed verified by ORBi
 

Files


Full Text
jbi.14009.pdf
Publisher postprint (1.35 MB)
Request a copy

All documents in ORBi are protected by a user license.

Send to



Details



Keywords :
Boyce index; bryophytes; local adaptation; niche conservatism; niche similarity; species distribution models; taxonomy
Abstract :
[en] Aim: Mounting evidence suggests that failure of species distribution models to integrate local adaptation hinders our ability to predict distribution ranges, raising the
question of whether modelling should be performed at the level of species (clade
models) or intraspecific lineages (subclade models), characterized by the restricted
availability of occurrence points. While Ensembles of Small Models (ESMs) offer an
attractive framework for small datasets, their evaluation remains critical. We address
these issues in the case of very small datasets inherent to subclade models and discuss
which modelling strategy should be applied based on niche overlap among lineages.
Location: Sweden.
Taxon: Mosses.
Methods: Ensembles of Small Models were evaluated by null models built from randomly sampled presence points. We compared the extent of suitable area predicted
by the projections of clade and subclade models. Niche overlap was quantified using
Schoener's D and Hellinger'sImetrics, and the significance of these metrics in terms
of niche conservatism or divergence was assessed by similarity tests.
Results: We introduced a simple procedure for evaluating ESMs based on the pooling of the statistics used to assess model accuracy from the replicates. Despite fairly
high AUC and TSS values, 2 of the 23 subclade models did not perform better than
null models and should be discarded. Combined predictions from subclade models
contributed, on average, five times more than clade models to the total suitable area
predicted by the combination of subclade and clade models. The D and I metrics averaged 0.45 and 0.71, with evidence for niche conservatism in half of the species and
no signal for niche divergence.
Main conclusions: In addition to the assessment of ESM accuracy based on the simple procedure described here, we recommend that ESMs should be systematically
evaluated against null models. Lumping or splitting occurrence data at the intraspecific level substantially impacted model projections. Given the poor performance of
models based on small datasets, even when employing ESMs, we pragmatically suggest that, in the absence of evidence for niche divergence during diversification of
closely related intraspecific lineages, SDMs should be based on all available occurrence data at the species level.
Disciplines :
Phytobiology (plant sciences, forestry, mycology...)
Environmental sciences & ecology
Author, co-author :
Collart, Flavien  ;  Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Biologie de l'évolution et de la conservation - aCREA-Ulg
Hedenäs, Lars
Brönnimann, Olivier
Guisan, Antoine ✱
Vanderpoorten, Alain  ✱;  Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Biologie de l'évolution et de la conservation - aCREA-Ulg
✱ These authors have contributed equally to this work.
Language :
English
Title :
Intraspecific differentiation: Implications for niche and distribution modelling
Publication date :
2021
Journal title :
Journal of Biogeography
ISSN :
0305-0270
eISSN :
1365-2699
Publisher :
Wiley, Oxford, United Kingdom
Volume :
48
Pages :
415-426
Peer reviewed :
Peer Reviewed verified by ORBi
Funders :
FRIA - Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture
Carl Tryggers Stiftelse för Vetenskaplig Forskning
Available on ORBi :
since 12 November 2020

Statistics


Number of views
315 (38 by ULiège)
Number of downloads
12 (12 by ULiège)

Scopus citations®
 
67
Scopus citations®
without self-citations
56
OpenAlex citations
 
82

Bibliography


Similar publications



Contact ORBi