Article (Scientific journals)
RNA-seq data and surprisal analysis of icl mutant and control strain of the green microalga Chlamydomonas reinhardtii during day/night cycles
Willamme, R.; Bogaert, K. A.; Remacle, Françoise et al.
2018In Data in Brief, 21, p. 351-353
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Abstract :
[en] The data presented in this article are associated to the research article “Surprisal analysis of the transcriptomic response of the green microalga Chlamydomonas to the addition of acetate during day/night cycles” (Willamme et al., 2018) [1]. Here the RNA-seq data of the icl mutant, a null mutant of the isocitrate lyase gene, and its control are summarized and the FPKM values are listed. The data were analysed using surprisal analysis and the genes contributing the strongest to the mutant and wild type phenotype are listed. The raw data are accessible at BioProject PRJNA437393 with SRA accession number SRP136101 (experiments SRX3824204–SRX3824249). The raw data set and expression values used for surprisal analysis are made public to enable critical or extended analyses. © 2018 The Authors
Disciplines :
Biochemistry, biophysics & molecular biology
Author, co-author :
Willamme, R.;  Genetics and Physiology of Microalgae, UR InBios, Chemin de la Vallée, 4, University of Liège, Liège, 4000, Belgium
Bogaert, K. A.;  Theoretical Physical Chemistry, UR MOLSYS, Allée du 6 Août, 11, University of Liège, Liège, 4000, Belgium
Remacle, Françoise  ;  Université de Liège - ULiège > Département de chimie (sciences) > Laboratoire de chimie physique théorique
Remacle, Claire  ;  Université de Liège - ULiège > Département des sciences de la vie > Génétique et physiologie des microalgues
Language :
English
Title :
RNA-seq data and surprisal analysis of icl mutant and control strain of the green microalga Chlamydomonas reinhardtii during day/night cycles
Publication date :
2018
Journal title :
Data in Brief
eISSN :
2352-3409
Publisher :
Elsevier Inc.
Volume :
21
Pages :
351-353
Peer reviewed :
Peer Reviewed verified by ORBi
European Projects :
FP7 - 618024 - BAMBI - Bottom-up Approaches to Machines dedicated to Bayesian Inference
Funders :
CE - Commission Européenne [BE]
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