FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana

Bouché, Frédéric; Lobet, Guillaume; Tocquin, Pierre; Périlleux, Claire

doi:10.1093/nar/gkv1054

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FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana

Bouché, Frédéric; Lobet, Guillaume; Tocquin, Pierre et al.

2016 • In Nucleic Acids Research, 44 (Database), p. 1167–D1171

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https://hdl.handle.net/2268/186136

DOI
10.1093/nar/gkv1054

PubMed
26476447

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Keywords :

Flowering; Arabidopsis; Photoperiod; Vernalization

Abstract :

[en] Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unravelling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefore created an evolutive and interactive database of flowering time genes, named FLOR-ID (Flowering-Interactive Database), that is available freely at http://www.flor-id.org. The hand-curated database contains information on 306 genes and links to 1595 publications gathering the work of more than 4500 authors. Gene function and interactions within the flowering pathways were inferred from the analysis of related publications, included in the database and translated into interactive manually drawn snapshots.

Research Center/Unit :

PhytoSYSTEMS

Disciplines :

Phytobiology (plant sciences, forestry, mycology...)

Author, co-author :

Bouché, Frédéric ^✱; Université de Liège > Département des sciences de la vie > Physiologie végétale

Lobet, Guillaume ^✱; Université de Liège > Département des sciences de la vie > Physiologie végétale

Tocquin, Pierre ; Université de Liège > Département des sciences de la vie > Physiologie végétale

Périlleux, Claire ; Université de Liège > Département des sciences de la vie > Physiologie végétale

^✱ These authors have contributed equally to this work.

Language :

English

Title :

FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana

Publication date :

January 2016

Journal title :

Nucleic Acids Research

ISSN :

0305-1048

eISSN :

1362-4962

Publisher :

Oxford University Press, Oxford, United Kingdom

Special issue title :

Database issue

Volume :

Issue :

Database

Pages :

D1167–D1171

Peer reviewed :

Peer Reviewed verified by ORBi

Additional URL :

http://reflexions.ulg.ac.be/en/FLORID

Funders :

F.R.S.-FNRS - Fonds de la Recherche Scientifique
Interuniversity Attraction Poles Programme, Belgian State, Belgian Science Policy [P7/29]

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since 23 September 2015

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