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• Ahn T.K., Avenson T.J., Ballottari M., Cheng Y.C., Niyogi K.K., Bassi R., Fleming G.R. Architecture of a charge-transfer state regulating light harvesting in a plant antenna protein. Science 2008, 320:794-797.
• Alboresi A., Gerotto C., Giacometti G.M., Bassi R., Morosinotto T. Physcomitrella patens mutants affected on heat dissipation clarify the evolution of photoprotection mechanisms upon land colonization. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:11128-11133.
• Allen J.F. Protein phosphorylation in regulation of photosynthesis. Biochim. Biophys. Acta 1992, 1098:275-335.
• Allen J.F. Photosynthesis of ATP - electrons, proton pumps, rotors, and poise. Cell 2002, 110:273-276.
• Allorent G., Tokutsu R., Roach T., Peers G., Cardol P., Girard-Bascou J., Seigneurin-Berny D., Petroutsos D., Kuntz M., Breyton C., Franck F., Wollman F.A., Niyogi K.K., Krieger-Liszkay A., Minagawa J., Finazzi G. A dual strategy to cope with high light in Chlamydomonas reinhardtii. Plant Cell 2013, 25:545-557.
• Amthor J.S. The McCree-de Wit-Penning de Vries-Thornley respiration paradigms: 30 years later. Ann. Bot. 2000, 86:1-20.
• Arnoux P., Morosinotto T., Saga G., Bassi R., Pignol D. A structural basis for the pH-dependent xanthophyll cycle in Arabidopsis thaliana. Plant Cell 2009, 21:2036-2044.
• Atteia A., Adrait A., Brugiere S., Tardif M., van Lis R., Deusch O., Dagan T., Kuhn L., Gontero B., Martin W., Garin J., Joyard J., Rolland N. A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds new light on the metabolic plasticity of the organelle and on the nature of the alpha-proteobacterial mitochondrial ancestor. Mol. Biol. Evol. 2009, 26:1533-1548.
• Ballottari M., Girardon J., Dall'osto L., Bassi R. Evolution and functional properties of photosystem II light harvesting complexes in eukaryotes. Biochim. Biophys. Acta 2012, 1817:143-157.
• Barber J., Archer M.D. P680, the primary electron donor of photosystem II. J. Photochem. Photobiol. A: Chem. 2001, 142:97-106.
• Beale C.V., Long S.P. Can perennial C4 grasses attain high efficiencies of radiant energy conversion in cool climates?. Plant Cell Environ. 1995, 18:641-650.
• Beckmann J., Lehr F., Finazzi G., Hankamer B., Posten C., Wobbe L., Kruse O. Improvement of light to biomass conversion by de-regulation of light-harvesting protein translation in Chlamydomonas reinhardtii. J. Biotechnol. 2009, 142:70-77.
• Begcy K., Mariano E.D., Mattiello L., Nunes A.V., Mazzafera P., Maia I.G., Menossi M. An Arabidopsis mitochondrial uncoupling protein confers tolerance to drought and salt stress in transgenic tobacco plants. PLoS ONE 2011, 6:e23776.
• Berberoglu H., Pilon L., Melis A. Radiation characteristics of Chlamydomonas reinhardtii CC125 and its truncated chlorophyll antenna transformants tla1, tlaX and tla1-CW+. Int. J. Hydrog. Energy 2008, 33:6467-6483.
• Bogen C., Klassen V., Wichmann J., La Russa M., Doebbe A., Grundmann M., Uronen P., Kruse O., Mussgnug J.H. Identification of Monoraphidium contortum as a promising species for liquid biofuel production. Bioresour. Technol. 2013, 133:622-626.
• Bogen C., Al-Dilaimi A., Albersmeier A., Wichmann J., Grundmann M., Rupp O., Lauersen K.J., Blifernez-Klassen O., Kalinowski J., Goesmann A., Mussgnug J.H., Kruse O. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics 2013, 14:926.
• Bolton J.R., Hall D.O. The maximum efficiency of photosynthesis. Photochem. Photobiol. 1991, 53:545-548.
• Bonaventura C., Myers J. Fluorescence and oxygen evolution from Chlorella pyrenoidosa. Biochim. Biophys. Acta 1969, 189:366-383.
• Bondioli P., Della Bella L., Rivolta G., Chini Zittelli G., Bassi N., Rodolfi L., Casini D., Prussi M., Chiaramonti D., Tredici M.R. Oil production by the marine microalgae Nannochloropsis sp. F&M-M24 and Tetraselmis suecica F&M-M33. Bioresour. Technol. 2012, 114:567-572.
• Bonente G., Passarini F., Cazzaniga S., Mancone C., Buia M.C., Tripodi M., Bassi R., Caffarri S. The occurrence of the psbS gene product in Chlamydomonas reinhardtii and in other photosynthetic organisms and its correlation with energy quenching. Photochem. Photobiol. 2008, 84:1359-1370.
• Bonente G., Ballottari M., Truong T.B., Morosinotto T., Ahn T.K., Fleming G.R., Niyogi K.K., Bassi R. Analysis of LhcSR3, a protein essential for feedback de-excitation in the green alga Chlamydomonas reinhardtii. PLoS Biol. 2011, 9:e1000577.
• Bonente G., Formighieri C., Mantelli M., Catalanotti C., Giuliano G., Morosinotto T., Bassi R. Mutagenesis and phenotypic selection as a strategy toward domestication of Chlamydomonas reinhardtii strains for improved performance in photobioreactors. Photosynth. Res. 2011, 108:107-120.
• Bonente G., Pippa S., Castellano S., Bassi R., Ballottari M. Acclimation of Chlamydomonas reinhardtii to different growth irradiances. J. Biol. Chem. 2012, 287:5833-5847.
• Bowler C., Allen A.E., Badger J.H., et al. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 2008, 456:239-244.
• Burlew S.J. Algal Culture: From Laboratory to Pilot Plant 1953, Carnegie Institution of Washington Publication.
• Cardol P., Gloire G., Havaux M., Remacle C., Matagne R., Franck F. Photosynthesis and state transitions in mitochondrial mutants of Chlamydomonas reinhardtii affected in respiration. Plant Physiol. 2003, 133:2010-2020.
• Cardol P., Alric J., Girard-Bascou J., Franck F., Wollman F.A., Finazzi G. Impaired respiration discloses the physiological significance of state transitions in Chlamydomonas. Proc. Natl Acad. Sci. U.S.A. 2009, 106:15979-15984.
• Chen M., Blankenship R.E. Expanding the solar spectrum used by photosynthesis. Trends Plant Sci. 2011, 16:427-431.
• Dall'Osto L., Caffarri S., Bassi R. A mechanism of nonphotochemical energy dissipation, independent from PsbS, revealed by a conformational change in the antenna protein CP26. Plant Cell 2005, 17:1217-1232.
• Dall'Osto L., Cazzaniga S., North H., Marion-Poll A., Bassi R. The Arabidopsis aba4-1 mutant reveals a specific function for neoxanthin in protection against photooxidative stress. Plant Cell 2007, 19:1048-1064.
• Dall'Osto L., Holt N.E., Kaligotla S., Fuciman M., Cazzaniga S., Carbonera D., Frank H.A., Alric J., Bassi R. Zeaxanthin protects plant photosynthesis by modulating chlorophyll triplet yield in specific light-harvesting antenna subunits. J. Biol. Chem. 2012, 287:41820-41834.
• de Bianchi S., Ballottari M., Dall'osto L., Bassi R. Regulation of plant light harvesting by thermal dissipation of excess energy. Biochem. Soc. Trans. 2010, 38:651-660.
• De Riso V., Raniello R., Maumus F., Rogato A., Bowler C., Falciatore A. Gene silencing in the marine diatom Phaeodactylum tricornutum. Nucleic acids Res. 2009, 37:e96.
• Dismukes G.C., Carrieri D., Bennette N., Ananyev G.M., Posewitz M.C. Aquatic phototrophs: efficient alternatives to land-based crops for biofuels. Curr. Opin. Biotechnol. 2008, 19:235-240.
• Doebbe A., Rupprecht J., Beckmann J., Mussgnug J.H., Hallmann A., Hankamer B., Kruse O. Functional integration of the HUP1 hexose symporter gene into the genome of C. reinhardtii: impacts on biological H2 production. J. Biotechnol. 2007, 131:27-33.
• Domozych D.S., Ciancia M., Fangel J.U., Mikkelsen M.D., Ulvskov P., Willats W.G. The cell walls of green algae: a journey through evolution and diversity. Front. Plant Sci. 2012, 3:82.
• Draaisma R.B., Wijffels R.H., Slegers P.M., Brentner L.B., Roy A., Barbosa M.J. Food commodities from microalgae. Curr. Opin. Biotechnol. 2013, 24:169-177.
• Duanmu D., Miller A.R., Horken K.M., Weeks D.P., Spalding M.H. Knockdown of limiting-CO2-induced gene HLA3 decreases HCO3- transport and photosynthetic Ci affinity in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:5990-5995.
• Ducat D.C., Avelar-Rivas J.A., Way J.C., Silver P.A. Rerouting carbon flux to enhance photosynthetic productivity. Appl. Environ. Microbiol. 2012, 78:2660-2668.
• Duby F., Matagne R.F. Alteration of dark respiration and reduction of phototrophic growth in a mitochondrial DNA deletion mutant of Chlamydomonas lacking cob, nd4, and the 3' end of nd5. Plant Cell 1999, 11:115-125.
• Elrad D., Niyogi K.K., Grossman A.R. A major light-harvesting polypeptide of photosystem II functions in thermal dissipation. Plant Cell 2002, 14:1801-1816.
• Emerson R. The quantum yield of photosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 1958, 9:1-24.
• Fang L., Lin H.X., Low C.S., Wu M.H., Chow Y., Lee Y.K. Expression of the Chlamydomonas reinhardtii sedoheptulose-1,7-bisphosphatase in Dunaliella bardawil leads to enhanced photosynthesis and increased glycerol production. Plant Biotechnol. J. 2012, 10:1129-1135.
• Ferrante P., Catalanotti C., Bonente G., Giuliano G. An optimized, chemically regulated gene expression system for Chlamydomonas. PLoS ONE 2008, 3:e3200.
• Ferrante P., Ballottari M., Bonente G., Giuliano G., Bassi R. LHCBM1 and LHCBM2/7 polypeptides, components of major LHCII complex, have distinct functional roles in photosynthetic antenna system of Chlamydomonas reinhardtii. J. Biol. Chem. 2012, 287:16276-16288.
• Finazzi G., Moreau H., Bowler C. Genomic insights into photosynthesis in eukaryotic phytoplankton. Trends Plant Sci. 2010, 15:565-572.
• Fischer N., Rochaix J.D. The flanking regions of PsaD drive efficient gene expression in the nucleus of the green alga Chlamydomonas reinhardtii. Mol. Genet. Genomics. 2001, 265:888-894.
• Formighieri C., Franck F., Bassi R. Regulation of the pigment optical density of an algal cell: filling the gap between photosynthetic productivity in the laboratory and in mass culture. J. Biotechnol. 2012, 162:115-123.
• Förster B., Osmond C.B., Boynton J.E., Gillham N.W. Mutants of Chlamydomonas reinhardtii resistant to very high light. J. Photochem. Photobiol. B 1999, 48:127-135.
• Förster B., Osmond C.B., Pogson B.J. Improved survival of very high light and oxidative stress is conferred by spontaneous gain-of-function mutations in Chlamydomonas. Biochim. Biophys. Acta 2005, 1709:45-57.
• Fu W., Gudmundsson O., Feist A.M., Herjolfsson G., Brynjolfsson S., Palsson B.O. Maximizing biomass productivity and cell density of Chlorella vulgaris by using light-emitting diode-based photobioreactor. J. Biotechnol. 2012, 161:242-249.
• Georgianna D.R., Mayfield S.P. Exploiting diversity and synthetic biology for the production of algal biofuels. Nature 2012, 488:329-335.
• Glick R.E., Melis A. Minimum photosynthetic unit size in system I and system II of barley chloroplasts. Biochim. Biophys. Acta 1988, 934:151-155.
• Gordon J.M., Polle J.E. Ultrahigh bioproductivity from algae. Appl. Microbiol. Biotechnol. 2007, 76:969-975.
• Govindjee G., Kern J.F., Messinger J., Whitmarsh J. Photosystem II 2001, John Wiley & Sons, Ltd, Hoboken, NJ.
• Grewe S., Ballottari M., Alcocer M., D'Andrea C., Blifernez-Klassen O., Hankamer B., Mussgnug J.H., Bassi R., Kruse O. Light-harvesting complex protein LHCBM9 is critical for photosystem II activity and hydrogen production in Chlamydomonas reinhardtii. Plant Cell 2014.
• Haake V., Zrenner R., Sonnewald U., Stitt M. A moderate decrease of plastid aldolase activity inhibits photosynthesis, alters the levels of sugars and starch, and inhibits growth of potato plants. Plant J. 1998, 14:147-157.
• Hamilton M.L., Haslam R.P., Napier J.A., Sayanova O. Metabolic engineering of Phaeodactylum tricornutum for the enhanced accumulation of omega-3 long chain polyunsaturated fatty acids. Metab. Eng. 2014, 22:3-9.
• Harris G., Königer M. The 'high' concentrations of enzymes within the chloroplast. Photosynth. Res. 1997, 54:5-23.
• Harrison E.P., Willingham N.M., Lloyd J.C., Raines C.A. Reduced sedoheptulose-1,7-bisphosphatase levels in transgenic tobacco lead to decreased photosynthetic capacity and altered carbohydrate accumulation. Planta 1997, 204:27-36.
• Henkes S., Sonnewald U., Badur R., Flachmann R., Stitt M. A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism. Plant Cell 2001, 13:535-551.
• Horton P. Prospects for crop improvement through the genetic manipulation of photosynthesis: morphological and biochemical aspects of light capture. J. Exp. Bot. 2000, 51:475-485.
• Ibarra R.U., Edwards J.S., Palsson B.O. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 2002, 420:186-189.
• Janssen M., de Winter M., Tramper J., Mur L.R., Snel J., Wijffels R.H. Efficiency of light utilization of Chlamydomonas reinhardtii under medium-duration light/dark cycles. J. Biotechnol. 2000, 78:123-137.
• Jiang W., Zhou H., Bi H., Fromm M., Yang B., Weeks D.P. Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acids Res. 2013, 41:e188.
• Johnson X., Alric J. Interaction between starch breakdown, acetate assimilation, and photosynthetic cyclic electron flow in Chlamydomonas reinhardtii. J Biol. Chem. 2012, 287:26445-26452.
• Johnson X., Steinbeck J., Dent R.M., Takahashi H., Richaud P., Ozawa S.I., Houille-Vernes L., Petroutsos D., Rappaport F., Grossman A.R., Niyogi K.K., Hippler M., Alric J. PGR5-mediated cyclic electron flow under ATP- or redox-limited conditions: a study of δATPase pgr5 and δrbcL pgr5 mutants in Chlamydomonas reinhardtii. Plant Physiol. 2014, 165:438-452.
• Junesch U., Gräber P. The rate of ATP synthesis as a function of δpH in normal and dithiothreitol-modified chloroplasts. Biochim. Biophys. Acta 1985, 809:429-434.
• Karkehabadi S., Peddi S.R., Anwaruzzaman M., Taylor T.C., Cederlund A., Genkov T., Andersson I., Spreitzer R.J. Chimeric small subunits influence catalysis without causing global conformational changes in the crystal structure of ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry 2005, 44:9851-9861.
• Kebeish R., Niessen M., Thiruveedhi K., Bari R., Hirsch H.J., Rosenkranz R., Stabler N., Schonfeld B., Kreuzaler F., Peterhansel C. Chloroplastic photorespiratory bypass increases photosynthesis and biomass production in Arabidopsis thaliana. Nature Biotechnol. 2007, 25:593-599.
• Kirchhoff H., Mukherjee U., Galla H.J. Molecular architecture of the thylakoid membrane: lipid diffusion space for plastoquinone. Biochemistry 2002, 41:4872-4882.
• Kirk J.T.O. Light and Photosynthesis in Aquatic Ecosystems 1994, Cambridge University Press, Cambridge, England.
• Kirst H., Garcia-Cerdan J.G., Zurbriggen A., Ruehle T., Melis A. Truncated photosystem chlorophyll antenna size in the green microalga Chlamydomonas reinhardtii upon deletion of the TLA3-CpSRP43 gene. Plant Physiol. 2012, 160:2251-2260.
• Kliphuis A.M., Martens D.E., Janssen M., Wijffels R.H. Effect of O2:CO2 ratio on the primary metabolism of Chlamydomonas reinhardtii. Biotechnol. Bioeng. 2011, 108:2390-2402.
• Kliphuis A.M., Klok A.J., Martens D.E., Lamers P.P., Janssen M., Wijffels R.H. Metabolic modeling of Chlamydomonas reinhardtii: energy requirements for photoautotrophic growth and maintenance. J. Appl. Phycol. 2012, 24:253-266.
• Kok B. Experiments on photosynthesis by Chlorella in flashing light. Algal Culture: From Laboratory to Pilot Plant 1953, 63-75. Carnegie Institution of Washington Publication, Washington, DC. J.S. Burlew (Ed.).
• Kouril R., Dekker J.P., Boekema E.J. Supramolecular organization of photosystem II in green plants. Biochim. Biophys. Acta 2012, 1817:2-12.
• Krieger-Liszkay A. Singlet oxygen production in photosynthesis. J. Exp. Bot. 2005, 56:337-346.
• Kruse O., Rupprecht J., Mussgnug J.H., Dismukes G.C., Hankamer B. Photosynthesis: a blueprint for solar energy capture and biohydrogen production technologies. Photochem. Photobiol. Sci. 2005, 4:957-970.
• Kruse O., Rupprecht J., Bader K.P., Thomas-Hall S., Schenk P.M., Finazzi G., Hankamer B. Improved photobiological H2 production in engineered green algal cells. J. Biol. Chem. 2005, 280:34170-34177.
• Lauersen K.J., Vanderveer T.L., Berger H., Kaluza I., Mussgnug J.H., Walker V.K., Kruse O. Ice recrystallization inhibition mediated by a nuclear-expressed and -secreted recombinant ice-binding protein in the microalga Chlamydomonas reinhardtii. Appl. Microbiol. Biotechnol. 2013, 97:9763-9772.
• Lecler R., Vigeolas H., Edmonds-Alt B., Cardol P., Remacle C. Characterization of an internal type-II NADH dehydrogenase from Chlamydomonas reinhardtii mitochondria. Curr. Genet. 2012, 58:205-216.
• Lefebvre S., Lawson T., Fryer M., Zakhleniuk O.V., Lloyd J.C., Raines C.A. Increased sedoheptulose-1,7-bisphosphatase activity in transgenic tobacco plants stimulates photosynthesis and growth from an early stage in development. Plant Physiol. 2005, 138:451-460.
• Li C.R., Liang D.D., Xu R.F., Li H., Zhang Y.P., Qin R.Y., Li L., Wei P.C., Yang J.B. Overexpression of an alternative oxidase gene, OsAOX1a, improves cold tolerance in Oryza sativa L. Genet. Mol. Res. 2013, 12:5424-5432.
• Li X.-P., Bjorkman O., Shih C., Grossman A.R., Rosenquist M., Jansson S., Niyogi K.K. A pigment-binding protein essential for regulation of photosynthetic light harvesting. Nature 2000, 403:391-395.
• Li X.-P., Phippard A., Pasari J., Niyogi K.K. Structure-function analysis of photosystem II subunit S (PsbS) in vivo. Funct. Plant Biol. 2002, 29:1131-1139.
• Liu Y.J., Norberg F.E., Szilágyi A., De Paepe R., Akerlund H.E., Rasmusson A.G. The mitochondrial external NADPH dehydrogenase modulates the leaf NADPH/NADP+ ratio in transgenic Nicotiana sylvestris. Plant Cell Physiol. 2008, 49:251-263.
• Liu Y.J., Nunes-Nesi A., Wallström S.V., Lager I., Michalecka A.M., Norberg F.E., Widell S., Fredlund K.M., Fernie A.R., Rasmusson A.G. A redox-mediated modulation of stem bolting in transgenic Nicotiana sylvestris differentially expressing the external mitochondrial NADPH dehydrogenase. Plant Physiol. 2009, 150:1248-1259.
• Lu Y., Rijzaani H., Karcher D., Ruf S., Bock R. Efficient metabolic pathway engineering in transgenic tobacco and tomato plastids with synthetic multigene operons. Proc. Natl. Acad. Sci. U.S.A. 2013, 110:E623-E632.
• Markou G., Angelidaki I., Georgakakis D. Microalgal carbohydrates: an overview of the factors influencing carbohydrates production, and of main bioconversion technologies for production of biofuels. Appl. Microbiol. Biotechnol. 2012, 96:631-645.
• Maier A., Fahnenstich H., von Caemmerer S., Engqvist M.K., Weber A.P., Flügge U.I., Maurino V.G. Transgenic introduction of a glycolate oxidative cycle into A. thaliana chloroplasts leads to growth improvement. Front. Plant Sci. 2012, 3:38.
• Mathy G., Cardol P., Dinant M., Blomme A., Gérin S., Cloes M., Ghysels B., DePauw E., Leprince P., Remacle C., Sluse-Goffart C., Franck F., Matagne R.F., Sluse F.E. Proteomic and functional characterization of a Chlamydomonas reinhardtii mutant lacking the mitochondrial alternative oxidase 1. J. Proteome Res. 2010, 9:2825-2838.
• McCree K.J. The action spectrum, absorptance and quantum yield of photosynthesis in crop plants. Agric. Meteorol. 1971, 9:191-216.
• Melis A. Solar energy conversion efficiencies in photosynthesis: minimizing the chlorophyll antennae to maximize efficiency. Plant Sci. 2009, 177:272-280.
• Mitchell P., Moyle J. Chemiosmotic hypothesis of oxidative phosphorylation. Nature 1967, 213:137-139.
• Mitra M., Kirst H., Dewez D., Melis A. Modulation of the light-harvesting chlorophyll antenna size in Chlamydomonas reinhardtii by TLA1 gene over-expression and RNA interference. Philos. Trans. R. Soc. Lond. B: Biol. Sci. 2012, 367:3430-3443.
• Miyagawa Y., Tamoi M., Shigeoka S. Overexpression of a cyanobacterial fructose-1,6-/sedoheptulose-1,7-bisphosphatase in tobacco enhances photosynthesis and growth. Nat. Biotechnol. 2001, 19:965-969.
• Molnar A., Bassett A., Thuenemann E., Schwach F., Karkare S., Ossowski S., Weigel D., Baulcombe D. Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii. Plant J. 2009, 58:165-174.
• Monteith J.L., Moss C.J. Climate and the efficiency of crop production in Britain [and discussion]. Philos. Trans. R. Soc. Lond. B: Biol. Sci. 1977, 281:277-294.
• Moroney J.V., Ynalvez R.A. Proposed carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii. Eukaryot. Cell 2007, 6:1251-1259.
• Morweiser M., Kruse O., Hankamer B., Posten C. Developments and perspectives of photobioreactors for biofuel production. Appl. Microbiol. Biotechnol. 2010, 87:1291-1301.
• Murik O., Elboher A., Kaplan A. Dehydroascorbate: a possible surveillance molecule of oxidative stress and programmed cell death in the green alga Chlamydomonas reinhardtii. New Phytol. 2014, 202:471-484.
• Munekage Y., Hashimoto M., Miyake C., Tomizawa K.-I., Endo T., Tasaka M., Shikanai T. Cyclic electron flow around photosystem I is essential for photosynthesis. Nature 2004, 429:579-582.
• Munekage Y., Hojo M., Meurer J., Endo T., Tasaka M., Shikanai T. PGR5 is involved in cyclic electron flow around photosystem I and is essential for photoprotection in Arabidopsis. Cell 2002, 110:361-371.
• Murchie E.H., Niyogi K.K. Manipulation of photoprotection to improve plant photosynthesis. Plant Physiol. 2011, 155:86-92.
• Mussgnug J.H., Wobbe L., Elles I., Claus C., Hamilton M., Fink A., Kahmann U., Kapazoglou A., Mullineaux C.W., Hippler M., Nickelsen J., Nixon P.J., Kruse O. NAB1 is an RNA binding protein involved in the light-regulated differential expression of the light-harvesting antenna of Chlamydomonas reinhardtii. Plant Cell 2005, 17:3409-3421.
• Mussgnug J.H., Thomas-Hall S., Rupprecht J., Foo A., Klassen V., McDowall A., Schenk P.M., Kruse O., Hankamer B. Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion. Plant Biotechnol. J. 2007, 5:802-814.
• Mussgnug J.H., Klassen V., Schlüter A., Kruse O. Microalgae as substrates for fermentative biogas production in a combined biorefinery concept. J. Biotechnol. 2010, 150:51-56.
• Neupert J., Karcher D., Bock R. Generation of Chlamydomonas strains that efficiently express nuclear transgenes. Plant J. 2009, 57:1140-1150.
• Nguyen A.V., Toepel J., Burgess S., Uhmeyer A., Blifernez O., Doebbe A., Hankamer B., Nixon P., Wobbe L., Kruse O. Time-course global expression profiles of Chlamydomonas reinhardtii during photo-biological H2 production. PLoS ONE 2011, 6:e29364.
• Nilkens M., Kress E., Lambrev P., Miloslavina Y., Muller M., Holzwarth A.R., Jahns P. Identification of a slowly inducible zeaxanthin-dependent component of non-photochemical quenching of chlorophyll fluorescence generated under steady-state conditions in Arabidopsis. Biochim. Biophys. Acta 2010, 1797:466-475.
• Niyogi K.K., Bjorkman O., Grossman A.R. Chlamydomonas xanthophyll cycle mutants identified by video imaging of chlorophyll fluorescence quenching. Plant Cell 1997, 9:1369-1380.
• Niyogi K.K., Grossman A.R., Bjorkman O. Arabidopsis mutants define a central role for the xanthophyll cycle in the regulation of photosynthetic energy conversion. Plant Cell 1998, 10:1121-1134.
• Niyogi K.K., Li X.-P., Rosenberg V., Jung H.-S. Is PsbS the site of non-photochemical quenching in photosynthesis?. J. Exp. Bot. 2005, 56:375-382.
• Oey M., Ross I.L., Stephens E., Steinbeck J., Wolf J., Radzun K.A., Kugler J., Ringsmuth A.K., Kruse O., Hankamer B. RNAi knock-down of LHCBM1, 2 and 3 increases photosynthetic H2 production efficiency of the green alga Chlamydomonas reinhardtii. PloS ONE 2013, 8:e61375.
• Ohresser M., Matagne R.F., Loppes R. Expression of the arylsulphatase reporter gene under the control of the nit1 promoter in Chlamydomonas reinhardtii. Curr. Genet. 1997, 31:264-271.
• Panda S.K., Sahoo L., Katsuhara M., Matsumoto H. Overexpression of alternative oxidase gene confers aluminum tolerance by altering the respiratory capacity and the response to oxidative stress in tobacco cells. Mol. Biotechnol. 2013, 54:551-563.
• Pawlowicz N.P., Groot M.L., van Stokkum I.H., Breton J., van Grondelle R. Charge separation and energy transfer in the photosystem II core complex studied by femtosecond midinfrared spectroscopy. Biophys. J. 2007, 93:2732-2742.
• Peers G., Truong T.B., Ostendorf E., Busch A., Elrad D., Grossman A.R., Hippler M., Niyogi K.K. An ancient light-harvesting protein is critical for the regulation of algal photosynthesis. Nature 2009, 462:518-521.
• Plancke C., Vigeolas H., Höhner R., Roberty S., Emonds-Alt B., Larosa V., Willamme R., Duby F., Onga Dhali D., Thonart P., Hiligsmann S., Franck F., Eppe G., Cardol P., Hippler M., Remacle C. Lack of isocitrate lyase in Chlamydomonas leads to changes in carbon metabolism and in the response to oxidative stress under mixotrophic growth. Plant J. 2014, 77:404-417.
• Polle J.E., Kanakagiri S.D., Melis A. tla1, a DNA insertional transformant of the green alga Chlamydomonas reinhardtii with a truncated light-harvesting chlorophyll antenna size. Planta 2003, 217:49-59.
• Radakovits R., Jinkerson R.E., Darzins A., Posewitz M.C. Genetic engineering of algae for enhanced biofuel production. Eukaryot. Cell 2010, 9:486-501.
• Radakovits R., Jinkerson R.E., Fuerstenberg S.I., Tae H., Settlage R.E., Boore J.L., Posewitz M.C. Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana. Nat. Commun. 2012, 3:686.
• Raghavendra A.S., Padmasree K. Beneficial interactions of mitochondrial metabolism with photosynthetic carbon assimilation. Trends Plant Sci. 2003, 8:546-553.
• Raines C.A. Increasing photosynthetic carbon assimilation in C3 plants to improve crop yield: current and future strategies. Plant Physiol. 2011, 155:36-42.
• Rasala B.A., Lee P.A., Shen Z., Briggs S.P., Mendez M., Mayfield S.P. Robust expression and secretion of Xylanase1 in Chlamydomonas reinhardtii by fusion to a selection gene and processing with the FMDV 2A peptide. PLoS ONE 2012, 7:e43349.
• Rasala B.A., Chao S.S., Pier M., Barrera D.J., Mayfield S.P. Enhanced genetic tools for engineering multigene traits into green algae. PLoS ONE 2014, 9:e94028.
• Rasala B.A., Mayfield S.P. Photosynthetic biomanufacturing in green algae; production of recombinant proteins for industrial, nutritional, and medical uses. Photosynth. Res. 2014.
• Rasmusson A.G., Wallström S.V. Involvement of mitochondria in the control of plant cell NAD(P)H reduction levels. Biochem. Soc. Trans. 2010, 38:661-666.
• Richard C., Ouellet H., Guertin M. Characterization of the LI818 polypeptide from the green unicellular alga Chlamydomonas reinhardtii. Plant Mol. Biol. 2000, 42:303-316.
• Rintamaki E., Martinsuo P., Pursiheimo S., Aro E.M. Cooperative regulation of light-harvesting complex II phosphorylation via the plastoquinol and ferredoxin-thioredoxin system in chloroplasts. Proc. Natl. Acad. Sci. U.S.A. 2000, 97:11644-11649.
• Robertson D.E., Jacobson S.A., Morgan F., Berry D., Church G.M., Afeyan N.B. A new dawn for industrial photosynthesis. Photosynth. Res. 2011, 107:269-277.
• Salinas T., Larosa V., Cardol P., Maréchal-Drouard L., Remacle C. Respiratory-deficient mutants of the unicellular green alga Chlamydomonas: a review. Biochimie 2014, 100:207-218.
• Schertl P., Braun H.P. Respiratory electron transfer pathways in plant mitochondria. Front. Plant Sci. 2014, 5:163.
• Schierenbeck, L., Ries, D., Rogge, K., Grewe, S., Weisshaar, B., Kruse, O., 2014. Fast forward genetics to identify mutations causing a high light tolerant phenotype in Chlamydomonas reinhardtii by whole-genome-sequencing (submitted for publication).
• Schmollinger S., Strenkert D., Schroda M. An inducible artificial microRNA system for Chlamydomonas reinhardtii confirms a key role for heat shock factor 1 in regulating thermotolerance. Curr. Genet. 2010, 56:383-389.
• Schönfeld C., Wobbe L., Borgstädt R., Kienast A., Nixon P.J., Kruse O. The nucleus-encoded protein MOC1 is essential for mitochondrial light acclimation in Chlamydomonas reinhardtii. J. Biol. Chem. 2004, 279:50366-50374.
• Schroda M., Blocker D., Beck C.F. The HSP70A promoter as a tool for the improved expression of transgenes in Chlamydomonas. Plant J. 2000, 21:121-131.
• Sforza E., Simionato D., Giacometti G.M., Bertucco A., Morosinotto T. Adjusted light and dark cycles can optimize photosynthetic efficiency in algae growing in photobioreactors. PLoS ONE 2012, 7:e38975.
• Shih P.M., Zarzycki J., Niyogi K.K., Kerfeld C.A. Introduction of a synthetic CO2-fixing photorespiratory bypass into a Cyanobacterium. J. Biol. Chem. 2014, 289:9493-9500.
• Siaut M., Heijde M., Mangogna M., Montsant A., Coesel S., Allen A., Manfredonia A., Falciatore A., Bowler C. Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum. Gene 2007, 406:23-35.
• Smith C.A., Melino V.J., Sweetman C., Soole K.L. Manipulation of alternative oxidase can influence salt tolerance in Arabidopsis thaliana. Physiol. Plant. 2009, 137:459-472.
• Subramanian S., Barry A.N., Pieris S., Sayre R.T. Comparative energetics and kinetics of autotrophic lipid and starch metabolism in chlorophytic microalgae: implications for biomass and biofuel production. Biotechnol. Biofuels 2013, 6:150.
• Sukenik A., Levy R.S., Levy Y., Falkowski P.G., Dubinsky Z. Optimizing algal biomass production in an outdoor pond: a simulation model. J. Appl. Phycol. 1991, 3:191-201.
• Sweetlove L.J., Lytovchenko A., Morgan M., Nunes-Nesi A., Taylor N.L., Baxter C.J., Eickmeier I., Fernie A.R. Mitochondrial uncoupling protein is required for efficient photosynthesis. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:19587-19592.
• Tafreshi H., Shariati M. Dunaliella biotechnology: methods and applications. J. Appl. Microbiol. 2009, 107:14-35.
• Thomas W.H., Seibert D.L.R., Alden M., Neori A., Eldridge P. Yields, photosynthetic efficiencies and proximate composition of dense marine microalgal cultures. II. Dunaliella primolecta and Tetraselmis suecica experiments. Biomass 1984, 5:211-225.
• Tokutsu R., Minagawa J. Energy-dissipative supercomplex of photosystem II associated with LHCSR3 in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. U.S.A. 2013, 110:10016-10021.
• Tolbert N.E. The C2 oxidative photosynthetic carbon cycle. Annu. Rev. Plant. Physiol. Plant Mol. Biol. 1997, 48:1-25.
• Tolleter D., Ghysels B., Alric J., Petroutsos D., Tolstygina I., Krawietz D., Happe T., Auroy P., Adriano J.M., Beyly A., Cuine S., Plet J., Reiter I.M., Genty B., Cournac L., Hippler M., Peltier G. Control of hydrogen photoproduction by the proton gradient generated by cyclic electron flow in Chlamydomonas reinhardtii. Plant Cell 2011, 23:2619-2630.
• Uemura K., Anwaruzzaman, Miyachi S., Yokota A. Ribulose-1,5-bisphosphate carboxylase/oxygenase from thermophilic red algae with a strong specificity for CO2 fixation. Biochem. Biophys. Res. Commun. 1997, 233:568-571.
• Vejrazka C., Janssen M., Streefland M., Wijffels R.H. Photosynthetic efficiency of Chlamydomonas reinhardtii in attenuated, flashing light. Biotechnol. Bioeng. 2012, 109:2567-2574.
• Vieler A., Wu G., Tsai C.H., et al. Genome, functional gene annotation, and nuclear transformation of the heterokont oleaginous alga Nannochloropsis oceanica CCMP1779. PLoS Genet. 2012, 8:e1003064.
• Vishwakarma A., Bashyam L., Senthilkumaran B., Scheibe R., Padmasree K. Physiological role of AOX1a in photosynthesis and maintenance of cellular redox homeostasis under high light in Arabidopsis thaliana. Plant Physiol. Biochem. 2014, 10.1016/j.plaphy.2014.01.019.
• Wallström S.V., Florez-Sarasa I., Araújo W.L., Aidemark M., Fernández-Fernández M., Fernie A.R., Ribas-Carbó M., Rasmusson A.G. Suppression of the external mitochondrial NADPH dehydrogenase, NDB1, in Arabidopsis thaliana affects central metabolism and vegetative growth. Mol. Plant. 2014, 7:356-368.
• Weyer K., Bush D., Darzins A., Willson B. Theoretical maximum algal oil production. Bioenerg. Res. 2010, 3:204-213.
• Whitney S.M., Houtz R.L., Alonso H. Advancing our understanding and capacity to engineer nature's CO2-sequestering enzyme. Rubisco. Plant Physiol. 2011, 155:27-35.
• Wijffels R.H., Barbosa M.J. An outlook on microalgal biofuels. Science (New York, N. Y.) 2010, 329:796-799.
• Wijffels R.H., Kruse O., Hellingwerf K.J. Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae. Curr. Opin. Biotechnol. 2013, 24:405-413.
• Wobbe L., Blifernez O., Schwarz C., Mussgnug J.H., Nickelsen J., Kruse O. Cysteine modification of a specific repressor protein controls the translational status of nucleus-encoded LHCII mRNAs in Chlamydomonas. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:13290-13295.
• Wobbe L., Nixon P.J. The mTERF protein MOC1 terminates mitochondrial DNA transcription in the unicellular green alga Chlamydomonas reinhardtii. Nucleic Acids Res. 2013, 41:6553-6567.
• Yamori W., Takahashi S., Makino A., Price G.D., Badger M.R., von Caemmerer S. The roles of ATP Synthase and the cytochrome b6/f complexes in limiting chloroplast electron transport and determining photosynthetic capacity. Plant Physiol. 2011, 155:956-962.
• Yang Y., Xu J., Vail D., Weathers P. Ettlia oleoabundans growth and oil production on agricultural anaerobic waste effluents. Bioresour. Technol. 2011, 102:5076-5082.
• Zhu X.G., Long S.P., Ort D.R. What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?. Curr. Opin. Biotechnol. 2008, 19:153-159.
• Zhu X.G., Long S.P., Ort D.R. Improving photosynthetic efficiency for greater yield. Ann. Rev. Plant Biol. 2010, 61:235-261.
• Zijffers J.W., Schippers K.J., Zheng K., Janssen M., Tramper J., Wijffels R.H. Maximum photosynthetic yield of green microalgae in photobioreactors. Mar. Biotechnol. (N. Y.) 2010, 12:708-718.