Sérusiaux, Emmanuël ; Université de Liège - ULiège > Département de Biologie, Ecologie et Evolution > Biologie de l'évolution et de la conservation - aCREA-Ulg
Vezda, Antonin
Language :
English
Title :
Phylogeny and systematics of the lichen family Gomphillaceae (Ostropales) inferred from cladistic analysis of phenotype data
Publication date :
2005
Journal title :
Lichenologist
ISSN :
0024-2829
eISSN :
1096-1135
Publisher :
Cambridge University Press, London, United Kingdom
Andersen, H. L. & Ekman, S. (2004) Phylogeny of the Micareaceae inferred from nrSSU DNA sequences. Lichenologist 36: 27-35.
Andersen, H. L. & Ekman, S. (2005) Disintegration of the Micareaceae (lichenized Ascomycota): a molecular phylogeny based on mitochondrial rDNA sequences. Mycological Research 205: 21-30.
Aptroot, A., Diederich, P., Sérusiaux, E. & Sipman, H. J. M. (1997) Lichens and lichenicolous fungi from New Guinea. Bibliotheca Lichenologica 64: 1-220.
Brusse, F. A. (1992) Gomphillaceae (Lichenes). A new species of Bullatina from the Transkei Wild Coast. Bothalia 22: 44-46.
Brusse, F. A. (1993) Eight new species in the lichen genus Parmelia (Ascomycotina, Parmeliaceae) from Southern Africa, with notes on Southern African lichens. Mycotaxon 49: 1-17.
Dennetière, B. & Péroni, J. (1998) Approche phylogénétique des Gomphillaceae. Cryptogamie Bryologie et Lichénologie 19: 105-121.
Ekman, S. (2001) Molecular phylogeny of the Bacidiaceae (Lecanorales, lichenized Ascomycota). Mycological Research 105: 783-797.
Ferraro, L. I. (2004) Morphological diversity in the hyphophores of Gomphillaceae (Ostropales, lichenized Ascomycetes). Fungal Diversity 15: 151-167.
Ferraro, L. I. & Lücking, R. (2003) Gyalectidium aurelii (Ostropales: Gomphillaceae), a new foliicolous lichen from the state of Mato Grosso, Brazil. Acta Botanica Brasilica 17: 619-622.
Ferraro, L. I., Lücking, R. & Sérusiaux, E. (2001) A world monograph of the lichen genus Gyalectidium (Gomphillaceae). Botanical Journal of the Linnean Society 137: 311-345.
Funk, A. (1973) Microlychnus gen. nov., a lichenized hyphomycete from western conifers. Canadian Journal of Botany 51: 1249-1250.
Gargas, A., DePriest, P. T., Grube, M. & Tehler, A. (1995) Multiple origins of lichen symbioses in fungi suggested by SSU rDNA phylogeny. Science 268: 1492-1495.
Gaya, E., Lutzoni, F., Zoller, S. & Navarro-Rosinés, P. (2003) Phylogenetic study of Fulgensia and allied Caloplaca and Xanthoria species (Teloschistaceae, lichen-forming Ascomycota). American Journal of Botany 90: 1095-1103.
Grube, M. & Arup, U. (2001) Molecular and morphological evolution in the Physciaceae (Lecanorales, lichenized Ascomycotina), with special emphasis on the genus Rinodina. Lichenologist 33: 63-72.
Grube, M., Baloch, E. & Lumbsch, H. T. (2004) The phylogeny of Porinaceae (Ostropomycetidae) suggests a neotenic origin of perithecia in Lecanoromycetes. Mycological Research 108: 1111-1118.
Hafellner, J. (1984) Studien in Richtung einer naturlicheren Gliederung der Sammelfamilien Lecanoraceae und Lecideaceae. Beiheft Nova Hedwigia 79: 241-371.
Hafellner J. (1988) Principles of classification and main taxonomic groups. In CRC Handbook of Lichenology, Vol. III (M. Galun, ed.): 41-52, Boca Raton: CRC Press.
Hale, M. E. Jr. (1980) Generic delimitation in the lichen family Thelotremataceae. Mycotaxon 11: 130-138.
Hartmann, C. (1996) Two new foliicolous species of Calenia (lichens, Gomphillaceae) from Costa Rica. Mycotaxon 59: 483-488.
Henssen A. & Lücking, R. (2002) Morphology, anatomy, and ontogeny in the Asterothyriaceae (Ascomycetes: Ostropales), a greatly misunderstood group of lichenized fungi. Annales Botanici Fennici 39: 273-299.
Herrera-Campos, M. A. & Lücking, R (2002) The foliicolous lichen flora of Mexico. I. New species from Los Tuxtlas Tropical Biology Station, Veracruz. Lichenologist 34: 211-222.
Herrera-Campos, M. A. & Lücking, R (2003) The foliicolous lichen flora of Mexico II. New species from the montane forest in Oaxaca and Puebla. Bryologist 106: 1-8.
Herrera-Campos, M. A., Colín, P. M., Bárcenas Peña, A. & Lücking, R. (2004) The foliicolous lichen flora of Mexico. III. New species from Volcán San Martín Tuxtla (Sierra de Los Tuxtlas), Veracruz, with notes on Fellhanera santessonii. Phyton (Horn, Austria) 44: 167-185.
Lendemer, J. C. & Lücking, R. (2004) Gyalideopsis moodyae (Ostropales: Gomphillaceae), a new lichen species from Eastern North America. Bryologist 107: 234-236
Kärnefelt, I. (1989) Morphology and phylogeny in the Teloschistales. Cryptogamic Botany 1: 147-203.
Kasalicky, T., Döring, H., Rambold, G. & Wedin, M. (2000) A comparison of ITS and LSU nrDNA phylogenies of Fulgensia (Teloschistaceae, Lecanorales), a genus of lichenized ascomycetes. Canadian Journal of Botany 78: 1580-1589.
Kauff, F. & Lutzoni, F. (2002) Phylogeny of Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits. Molecular Phylogeny and Evolution 25: 138-156.
LaGreca, S. & Lumbsch, H. T. (2001) The phylogenetic position of the Candelariaceae (Lecanorales) inferred from anatomical and molecular data. Bibliotheca Lichenologica 78: 211-222.
Lohtander, K., Källersjö, M., Moberg, R. & Tehler, A. (2000) The family Physciaceae in Fennoscandia: phylogeny inferred from ITS sequences. Mycologia 92: 728-735.
Lücking, R. (1991) Neue Arten foliikoler Flechten aus Costa Rica, Zentralamerika. Nova Hedwigia 52: 267-304.
Lücking, R. (1995) Additions and corrections to the foliicolous lichen flora of Costa Rica. The family Arthoniaceae, with notes on the genus Stirtonia. Lichenologist 27: 127-153.
Lücking, R. (1997) Additions and corrections to the knowledge of the foliicolous lichen flora of Costa Rica. The family Gomphillaceae. Bibliotheca Lichenologica 65: 1-109.
Lücking R. (1999) Addiciones y correcciones al conocimiento de la líquenoflora foliícola de Costa Rica. La familia Asterothyriaceae y el género Chroodiscus (Thelotremataceae), con un análisis filogenético. Cryptogamie Mycologie 20: 193-224.
Lücking, R. (2001) Lichens on leaves in tropical rain forests: life in a permanently ephemerous environment. Dissertationes Botanicae 346: 41-77.
Lücking, R. (2005) Foliicolous lichenized fungi. Flora Neotropica Monograph (in press).
Lücking, R. & Kalb, K. (2000) Foliikole Flechten aus Brasilien (vornehmlich Amazonien), inklusive einer Checkliste und Bemerkungen zu Coenogonium und Dimerella (Gyalectaceae). Botanische Jahrbücher für Systematik 122: 1-61.
Lücking R. & Kalb, K. (2002) New species and further additions to the foliicolous lichen flora of Kenya (East Africa), including the first lichenicolous Aulaxina (Ostropales: Gomphillaceae). Botanical Journal of the Linnean Society 139: 171-180.
Lücking R. & Sérusiaux, E. (1998) Gyalideopsis cochlearifera, a new pantropical, commensalistic species on foliicolous Gomphillaceae. Lichenologist 30: 543-549.
Lücking, R., Sérusiaux, E., Maia, L. C. & Pereira, E. C. G. (1998) A taxonomic revision of names of foliicolous, lichenized fungi published by Batista and co-workers between 1960 and 1975. Lichenologist 30: 121-191.
Lücking, R., Wirth, V., Ferraro, L. I. & Cáceres, M. E. S. (2003) Foliicolous lichens from Valdivian temperate rain forest of Chile and Argentina: evidence of an austral element, with description of seven new taxa. Global Ecology and Biogeography 12: 21-36.
Lücking, R., Stuart, B. & Lumbsch, H. T. (2004) Phylogenetic relationships of Gomphillaceae and Asterothyriaceae - evidence from a combined Bayesian analysis of nuclear and mitochondrial sequences. Mycologia 96: 283-294.
Lumbsch, H. T. (2002) How objective are genera in euascomycetes? Perspectives in Plant Ecology, Evolution and Systematics 5: 91-101.
Lumbsch T., Schmitt I., Palice Z., Wiklund E., Ekman S. & Wedin M. (2004) Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences. Molecular Phylogenetics and Evolution 31: 822-832.
Lutzoni, F., Kauff, F., Cox, J. C., McLaughlin, D., Celio, G., Dentinger, B., Padamsee, M., Hibbett, D., James, T. Y., Baloch, E., Grube, M., Reeb, V., Hofstetter, V., Shcoch, C., Arnold, A. E., Miadlikowska, J., Spatafora, J., Johnson, D., Hambleton, S., Crockett, M., Shoemaker, R., Sung, G.-H., Lücking, R., Lumbsch, T., O'Donnell, K., Binder, M., Diederich, P., Ertz, D., Gueidan, C., Hansen, K., Harris, R. C., Hosaka, K., Lim, Y.-W., Matheny, B., Nishida, H., Pfister, D., Rogers, J., Rossman, A., Schmitt, I., Sipman, H., Stone, J., Sugiyama, J., Yahr, R. & Vilgalys, R. (2004) Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. American Journal of Botany 91: 1446-1480.
Müller Argoviensis, J. (1890) Lichenes Epiphylli Novi. Genève.
Nordin, A. & Mattsson, J. E. (2001) Phylogenetic reconstruction of character development in Physciaceae. Lichenologist 33: 3-23.
Persoh, D., Beck, A. & Rambold, G. (2004) The distribution of ascus types and photobiontal selection in Lecanoromycetes (Ascomycota) against the background of a revised SSU nrDNA phylogeny. Mycological Progress 3: 103-121.
Poe, S. & Wiens, J. J. (2000) Character selection and the methodology of morphological phylogenetics. In Phylogenetic Analysis of Morphological Data (J. J. Wiens, ed.): 20-36. Washington, D.C.: Smithsonian Institution Press.
Rambold, G. & Hagedorn, G. (1998) The distribution of selected diagnostic characters in the Lecanorales. Lichenologist 30: 473-487.
Santesson, R. (1952) Foliicolous lichens I. A revision of the taxonomy of the obligately foliicolous, lichenized fungi. Symbolae Botanicae Upsalienses 12(1): 1-590.
Santesson, R. & Lücking, R. (1999) Additions to the foliicolous lichen flora of the Ivory Coast and Guinea (tropical West Africa). Nordic Journal of Botany 19: 719-734.
Scheidegger, C., Mayrhofer, H., Moberg, R. & Tehler, A. (2001) Evolutionary trends in the Physciaceae. Lichenologist 33: 25-45.
Sérusiaux, E. (1986) The nature and origin of campylidia in lichenized fungi. Lichenologist 18: 1-35.
Sérusiaux, E. (1995) Further new lichen species producing campylidia or complex conidiomata. Bibliotheca Lichenologica 58: 411-431.
Sérusiaux, E. & De Sloover, J. R. (1986) Taxonomical and ecological observations on foliicolous lichens in northern Argentina, with notes on the hyphophores of Asterothyriaceae. Veröffentlichungen des Geobotanischen Instituts, Stiftung Rübel, Zürich 91: 260-292.
Sherwood, M. A. (1977) The Ostropalean fungi. Mycotaxon 5: 1-277.
Sipman, H. J. M. & Harris, R. C. (1989) Lichens. In Tropical Rain Forest Ecosystems (H. Lieth & M. J. A. Werger, eds.): 303-309. Amsterdam: Elsevier.
Søchting, U. & Lutzoni, F. (2003) Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae). Mycological Research 107: 1266-1276.
Staiger, B. (2002) Die Flechtenfamile Graphidaceae. Studien in Richtung einer natürlicheren Gliederung. Bibliotheca Lichenologica 85: 1-526.
Swofford, D. L. (2003) PAUP*. Phylogenetic Analysis using Parsimony (*and Other Methods). Sunderland: Sinauer Associates.
Vainio, E.A. (1896) Lichenes antillarum a W. R. Elliott collecti. Journal of Botany 34: 31-36, 66-72, 100-108.
Vězda, A. (1979) Flechtensystematische Studien. XI. Beiträge zur Kenntnis der Familie Asterothyriaceae (Discolichenes). Folia Geobotanica et Phytotaxonomica, Praha, 14: 43-94.
Vězda, A. (1986) Neue Gattungen der Familie Lecideaceae s. lat. (Lichenes). Folia Geobotanica et Phytotaxonomica, Praha, 21: 199-219.
Vězda, A. (2003) Gyalideopsis tuerkii (lichenisierte Ascomycotina, Gomphillaceae), eine neue Art der Alpen. Herzogia 16: 35-40.
Vězda, A. & Poelt, J. (1987) Flechtensystematische Studien. XII. Die Familie Gomphillaceae und ihre Gliederung. Folia Geobotanica et Phytotaxonomica, Praha, 22: 179-198.
Watson, W. (1929) The classification of lichens. New Phytologist 28: 1-116.
Wedin, M., Döring, H., Nordin, A. & Tibell, L. (2000) Small subunit rDNA phylogeny shows the lichen families Caliciaceae and Physciaceae (Lecanorales, Ascomycotina) to form a monophyletic group. Canadian Journal of Botany 78: 246-254.
Wedin, M., Baloch, E. & Grube, M. (2002) Parsimony analyses of mtSSU and nITS rDNA sequences reveal the natural relationships of the lichen families Physciaceae and Caliciaceae. Taxon 51: 655-660.
Wiley, E. O., Siegel-Causey, D., Brooks, D. R., & Funk, V. A. (1991) The Compleat Cladist. Lawrence: University of Kansas Museum of Natural History.