alternative oxidase; yeast; mitoproteome; proteomics; two-dimensional differential in-gel electrophoresis
Abstract :
[en] The energy-dissipating alternative oxidase (AOX) from Hansenula anomala, was expressed in Saccharomyces cerevisiae. The recombinant AOX was functional. A comparative analysis by two-dimensional differential in-gel electrophoresis (2D-DIGE) of mitochondrial protein patterns found in wild-type and recombinant AOX strains was performed. 60 proteins exhibiting a significant difference in their abundance were identified. Interestingly, proteins implicated in major metabolic pathways such as Krebs cycle and amino acid biosynthesis were up-regulated. Surprisingly, an up-regulation of the respiratory-chain complex III was associated with a down-regulation of the ATP synthase complex.
Disciplines :
Biochemistry, biophysics & molecular biology
Author, co-author :
Mathy, Grégory ; Université de Liège - ULiège > Département des sciences de la vie > Bioénergétique et physiologie cellulaire
Jarmuszkiewicz, W.; Sluse-Goffart, C. M.; Hryniewiecka, L.; Michejda, J.; Sluse, F. E. Electron partitioning between the two branching quinol-oxidizing pathways in Acanthamoeba castellanii mitochondria during steady-state 3 respiration. J. Biol Chem. 1998, 273, 10174-10180.
Jarmuszkiewicz, W.; Sluse-Goffart, C. M.; Hryniewiecka, L.; Sluse, F. E. Identification and characterization of a protozoan uncoupling protein in Acanthamoeba castellanii. J. Biol. Chem. 1999, 274, 23198-23202.
Jarmuszkiewicz, W.; Milani, G.; Fortes, F.; Schreiber, A. Z.; Sluse, F. E.; Vercesi, A. E. First evidence and characterization of an uncoupling protein in fungi kingdom: CpUCP of Candida parapsilosis. FEES left. 2000, 467, 145-149.
Milani, G.; Jarmuszkiewicz, W.; Sluse-Goffart, C. M.; Schreiber, A. Z.; Vercesi, A. E.; Sluse, F. E. Respiratory chain network in mitochondria of Candida parapsilosis: ADP/O appraisal of the multiple electron pathways. FEBS Lett. 2001, 508, 231-235.
Almeida, A. M.; Navet, R.; Jarmuszkiewicz, W.; Vercesi, A. E.; Sluse-Goffart, C. M.; Sluse, F. E. The energy-conserving and energy-dissipating processes in mitochondria isolated from wild type and nonripening tomato fruits during development on the plant. J. Bioenerg. Biomembr. 2002, 34, 487-498.
Navet, R.; Jarmuszkiewicz, W.; Almeida, A. M.; Sluse-Goffart, C.; Sluse F. E. Energy conservation and dissipation in mitochondria isolated from developing tomato fruit of ethylene-defective mutants failing normal ripening: the effect of ethephon, a chemical precursor of ethylene. J. Bioenerg. Biomembr. 2003, 35, 157-168.
Klingenberg, M.; Echtay, K. S. Uncoupling proteins: the issues from a biochemist point of view. Biochim. Biophys. Acta 2001, 1504, 128-143.
Navet, R.; Douette, P.; Puttine-Marique, F.; Sluse-Goffart, C. M.; Jarmuszkiewicz, W.; Sluse, F. E. Activation and regulation of plant uncoupling protein in potato tuber mitochondria. FEBS Lett. 2005, 579, 4437-4442.
Jarmuszkiewicz, W.; Navet, R.; Alberici, L. C.; Douette, P.; Sluse-Goffart, C. M.; Sluse, F. E.; Vercesi, A. Redox state of endogenous coenzyme Q modulates the inhibition of linoleic acid-induced uncoupling by guanosine triphosphate in isolated skeletal muscle mitochondrial. J. Bioenerg. Biomembr. 2004, 36, 493-502.
Jarmuszkiewicz, W.; Swida, A.; Czarna, M.; Antos, N.; Sluse-Goffart, C. M.; Sluse, F. E. In phosphorylating Acanthamoeba castellanii mitochondria the sensitivity of uncoupling protein activity to GTP depends on the redox state of quinone. J. Bioenerg. Biomembr. 2005, 37, 97-107.
Berthold, D. A.; Andersson, M. E.; Nordlund, P. New insight into the structure and function of the alternative oxidase. Biochim. Biophys. Acta 2000, 1460, 241-254.
Hoefnagel, M. H.; Wiskich, J. T. Activation of the plant alternative oxidase by high reduction levels of the Q-pool and pyruvate. Arch. Biochem. Biophys. 1998, 355, 262-270.
Umbach, A. L.; Siedow, J. N. Covalent and noncovalent dimers of the cyanide-resistant alternative oxidase protein in higher plant mitochondria and their relationship to enzyme activity. Plant Physiol. 1993, 103, 845-854.
Rhoads, D. M.; Umbach, A. L.; Sweet, C. R.; Lennon, A. M.; Rauch, G. S.; Siedow, J. N. Regulation of the cyanide-resistant alternative oxidase of plant mitochondria. Identification of the cysteine residue involved in α-keto acid stimulation and intersubunit disulfide bond formation. J. Biol. Chem. 1998, 273, 30750-30756.
Sakajo, S.; Minagawa, N.; Yoshimoto, A. Effects of nucleotides on cyanide-resistant respiratory activity in mitochondria isolated from antimycin A-treated yeast Hansenula anomala. Biosci. Biotechnol. Biochem. 1997, 61, 396-399.
Jarmuszkiewicz, W.; Sluse-Goffart, C. M.; Vercesi, A. E.; Sluse, F. E. Alternative oxidase and uncoupling protein: thermogenesis versus cell energy balance. Biosci. Rep. 2001, 21, 213-222.
Nicholls, D. G. Brown adipose tissue mitochondria. Biochim. Biophys. Acta 1979, 549, 1-29.
Meeuse, B. D. J. Thermogenetic respiration in Aroids. Annu. Rev. Plant Physiol. 1975, 26, 117-126.
Luttik, M. A.; Overkamp, K. M.; Kotter, P.; de Vries, S.; van Dijken, J. P.; Pronk, J. T. The Saccharomyces cerevisiae NDE1 and NDE2 genes encode separate mitochondrial NADH dehydrogenases catalyzing the oxidation of cytosolic NADH. J. Biol. Chem. 1998, 273, 24529-24534.
De Vries, S.; Grivell, L. A. Purification and characterization of a rotenone-insensitive NADH:Q6 oxidoreductase from mitochondria of Sacchammyces cerevisiae. Eur. J. Biochem. 1988, 176, 377-384.
Moore, A. L.; Siedow, J. N. The regulation and the nature of the cyanide-resistant alternative oxidase of plant mitochondria. Biochim. Biophys. Acta 1991, 1059, 121-140.
Lambers, H. Cyanide-resistant respiration: a nonphosphorylating electron transport pathway acting as an energy-overflow. Physiol. Plant. 1982, 55, 478-485.
Sluse F. E.; Jarmuszkiewicz, W. Uncoupling proteins outside the animal and plant kingdoms: functional and evolutionary aspects. FEBS Lett. 2002, 510, 117-120.
Ježek, P. Possible physiological roles of mitochondrial uncoupling proteins-UCPn. Int. J. Biochem. Cell Biol. 2002, 34, 1190-1206.
Purvis, A. C. Role of the alternative oxidase in limiting superoxide production by plant mitochondria. Physiol. Plant. 1997, 100, 165-170.
Maxwell, D. P.; Wang, Y.; McIntosh, L. The alternative oxidase lowers mitochondrial reactive oxygen species in plants cells. Proc. Natl Acad. Sci. U.S.A. 1999, 8271-8276.
Czarna, M.; Jarmuszkiewicz, W. Activation of alternative oxidase and uncoupling protein lowers hydrogen peroxide formation in amoeba Acanthamoeba castellanii mitochondria. FEES Lett. 2005, 579, 3136-3140.
Douette, P.; Gerkens, P.; Navet, R.; Leprince, P.; De Pauw, E.; Sluse, F. E. Uncoupling protein 1 affects the yeast mitoproteome and oxygen free radicals production. Free Radic. Biol. Med. 2005, In press.
Sakajo, S.; Minagawa, N.; Yoshimoto, A. Characterization of the alternative oxidase protein in the yeast Hansenula anomala. FEES Lett. 1993, 318, 310-312.
Kozak, M. Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 1986, 44, 283-292.
Daum, G.; Bohni, P. C.; Schatz, G. Import of proteins into mitochondria. Cytochrome b2 and cytochrome c peroxidase are located in the intermembrane space of yeast mitochondria. J. Biol. Chem. 1982, 257, 13028-13033.
Meisinger, C.; Sommer, T.; Pfanner, N. Purification of Saccharomcyes cerevisiae mitochondria devoid of microsomal and cytosolic contaminations. Anal. Biochem. 2000, 287, 339-342.
Douette, P.; Navet, R.; Bouillenne, F.; Brans, A.; Sluse-Goffart, C.; Matagne, A.; Sluse, F. E. Secondary-structure characterization by far-UV CD of highly purified uncoupling protein 1 expressed in yeast. Biochem. J. 2004, 380, 139-145.
Alban, A.; David, S. O.; Bjorkesten, L.; Andersson, C.; Sloge, E.; Lewis, S.; et al. A novel experimental design for comparative two-dimensional gel analysis: Two-dimensional difference gel electrophoresis incorporating a pooled internal standard. Proteomics 2003, 3, 36-44.
Knowles, M. R.; Cervino, S.; Skynner, H. A.; Hunt, S. P.; de Felipe, C.; Salim, K.; et al. Multiplex proteomic analysis by two-dimensional differential in-gel electrophoresis. Proteomics 2003, 3, 1162-1171.
Görg, A.; Boguth, G.; Obermaier, C.; Posch, A.; Weiss, W. Two-dimensional polyacrylamide gel electrophoresis with immobilized pH gradients in the first dimension (IPG-Dalt): the state of the art and the controversy of vertical versus horizontal systems. Electrophoresis 1995, 16, 1079-1086.
Shevchenko, A.; Wilm, M.; Vorm, O.; Mann, M. Mass spectrametric sequencing of proteins silver-stained polyacrylamide gels. Anal. Chem. 1996, 68, 850-858.
Douette, P.; Navet, R.; Gerkens, P.; de Pauw, E.; Leprince, P.; Sluse-Goffart, C.; Sluse, F. E. Steatosis-induced proteomic changes in liver mitochondria evidenced by two-dimensional differential in-gel electrophoresis. J. Proteome Res. 2005, In press.
Van den Bergh, G.; Arckens, L. Fluorescent two-dimensional difference in-gel electrophoresis unveils the potential of gel-based proteomics. Curr. Opin. Biotechnol. 2004, 15, 38-43.
Lilley, K. S.; Friedman, D. B. All about DIGE: quantification technology for differential-display 2D-gel proteomics. Expert Rev. Proteomics 2004, 1, 401-409.
Kohlhaw, G.B. Leucine biosynthesis in Fungi: entering metabolism through the back door. Microbiol. Mol. Biol. Rev. 2003, 67, 1-15.
Hu, Y.; Cooper, T. G.; Kohlhaw, G. B. The Saccharomyces cerevisiae Leu3 protein activates expression of GDH1, a key gene in nitrogen assimilation. Mol. Cell. Biol. 1995, 15, 52-57.
Chen, X. J.; Wang, X.; Kaufman, B. A.; Butow, R. A. Aconitase couples metabolic regulation to mitochondrial DNA maintenance. Science 2005, 307, 714-717.
Affourtit, C.; Albury, M. A.; Krab, K.; Moore, A. L. Functional expression of the plant alternative oxidase affects the growth of the yeast Schizosaccharomycs pombe. J. Biol. Chem. 1999, 274, 6212-6218.