Article (Scientific journals)
Seventeen copies of the human 37 kDa laminin receptor precursor/p40 ribosome-associated protein gene are processed pseudogenes arisen from retropositional events
Jackers, Pascale; Clausse, Nathalie; Fernandez, Maria-Teresa et al.
1996In Biochimica et Biophysica Acta, 1305 (1-2), p. 98-104
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Keywords :
Base Sequence; DNA Transposable Elements; DNA, Complementary; Evolution; Genome, Human; Humans; Molecular Sequence Data; Multigene Family; Pseudogenes; RNA Processing, Post-Transcriptional; Receptors, Laminin/genetics; Ribosomal Proteins/genetics; Sequence Homology, Nucleic Acid
Abstract :
[en] A cDNA coding for a 37 kDa polypeptide has been identified in several species as both the potential precursor of the 67 kDa laminin receptor (37LRP) and a putative ribosome-associated protein (p40). Interestingly, increased expression of this polypeptide (37LRP/p40) is consistently observed in invasive and metastatic cancer cells and is associated with poor prognosis. Southern-blot analysis of human genomic DNA predicted multiple copies of the 37LRP/p40 gene. In this study, we report that the number of copies of this sequence in the human genome is 26 +/- 2. We have sequenced and analyzed 19 genomic clones corresponding to the 37LRP/p40 gene and found that they were all processed pseudogenes. They all lack intronic sequences and show multiple genetic alterations leading in some cases to the appearance of stop codons. Moreover, they all bear characteristic features of retroposons as the presence of a poly(A)-tail at their 3' end and short direct repeated flanking DNA sequences. None of the pseudogenes analyzed present cis-elements in their 5' flanking region such as TATA or GC boxes. Our date reveal that over 50% of the 37LRP/p40 gene copies are pseudogenes most probably generated by retropositional events. The finding of multiple pseudogenes for the 37LRP/p40 suggests that the accumulation of several copies of this gene might have given a survival advantage to the cell in the course of evolution.
Disciplines :
Oncology
Biochemistry, biophysics & molecular biology
Genetics & genetic processes
Author, co-author :
Jackers, Pascale ;  Université de Liège - ULiège > Laboratoire de recherche sur les métastases
Clausse, Nathalie;  Université de Liège - ULiège > Laboratoire de recherche sur les métastases
Fernandez, Maria-Teresa;  National Cancer Institute - NCI > Molecular Pathology Section
Berti, Andrea;  Université de Liège - ULiège > Laboratoire de recherche sur les métastases
Princen, Frédéric;  National Cancer Institute - NCI > Molecular Pathology Section
Wewer, Ulla;  National Cancer Institute - NCI > Molecular Pathology Section
Sobel, Mark E.;  Université de Liège - ULiège > Département des sciences biomédicales et précliniques > Biologie générale et cellulaire - GIGA-R : Labo de recherche sur les métastases
Castronovo, Vincenzo 
Language :
English
Title :
Seventeen copies of the human 37 kDa laminin receptor precursor/p40 ribosome-associated protein gene are processed pseudogenes arisen from retropositional events
Publication date :
07 February 1996
Journal title :
Biochimica et Biophysica Acta
ISSN :
0006-3002
eISSN :
1878-2434
Publisher :
Elsevier, Amsterdam, Netherlands
Volume :
1305
Issue :
1-2
Pages :
98-104
Peer reviewed :
Peer Reviewed verified by ORBi
Name of the research project :
"Etude de la famille mutigénique codant pour la protéine PRL37/p40"
BIOMED 1 (No. BMH-1-CT92-0520)
Funders :
Fondation contre le Cancer [BE]
Télévie [BE]
EU - European Union [BE]
F.R.S.-FNRS - Fonds de la Recherche Scientifique [BE]
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