Reconstruction of spatiotemporal capture data by means of orthogonal functions: the case of skipjack tuna (Katsuwonus pelamis) in the Central-east Atlantic
Catches; Missing data; Spatiotemporal data reconstruction; Singular value decomposition; DINEOF
Abstract :
[en] The information provided by the International Commission for the Conservation of Atlantic Tunas (ICCAT) about captures of skipjack tuna (Katsuwonus pelamis) in the Central-east Atlantic has a number of limitations, such as gaps in the statistics for certain fleets or the level of spatiotemporal detail at which catches are reported. As a result, the quality of such data and their effectiveness for providing management advice is limited. In order to reconstruct missing spatial-temporal data of catches, the present study uses Data INterpolating Empirical Orthogonal Functions (DINEOF), a technique for missing data reconstruction applied here for first time to fisheries data. DINEOF is based on an Empirical Orthogonal Functions (EOF) decomposition performed with a Lanczos method. DINEOF was tested with different amounts of missing data, intentionally removing values from 3.4% to 95.2% of data loss, and then compared to the same data set with no missing data. These validation analyses show that DINEOF is a reliable methodological approach of data reconstruction for the purposes of fishery management advice, even when the amount of missing data is very high.
Research Center/Unit :
MARE - Centre Interfacultaire de Recherches en Océanologie - ULiège
Disciplines :
Earth sciences & physical geography
Author, co-author :
Ganzedo, Unai
Erdaide, Oihane
Trujillo-Santana, Aaron
Alvera Azcarate, Aïda ; Université de Liège - ULiège > Département d'astrophys., géophysique et océanographie (AGO) > GeoHydrodynamics and Environment Research (GHER)
Castro, José J.
Language :
English
Title :
Reconstruction of spatiotemporal capture data by means of orthogonal functions: the case of skipjack tuna (Katsuwonus pelamis) in the Central-east Atlantic
scite shows how a scientific paper has been cited by providing the context of the citation, a classification describing whether it supports, mentions, or contrasts the cited claim, and a label indicating in which section the citation was made.
Bibliography
Alvera-Azcárate A., Barth A., Rixen M., Beckers J. 2005. Reconstruction of incomplete oceanographic data sets using empirical orthogonal functions: application to the Adriatic Sea surface temperature. Ocean Model. 9: 325-346.
Alvera-Azcárate A., Barth A., Beckers J., Weisberg R. 2007. Mul-tivariate reconstruction of missing data in sea surface temperature, chlorophyll, and wind satellite fields. J. Geophys. Res.-Oceans 112: C03008.
Agnew D.J., Pearce J., Pramod G., Peatman T., Watson R., Bed-dington J.R., Pitcher T.J. 2009. Estimating the worldwide extent of illegal fishing. PloS ONE 4(2): e4570. doi: 10.1371/journal. pone.0004570.
Anonymous. 1999. Report of the working group on the assessment of northern shelf demersal stocks. ICES CM 2000/ACFM 1, 402 pp.
Bard F., Antoine L. 1986. Croissance du listao dans l'Atlantique est. In: Comptes-rendus de la Conference ICCAT sur le Programme de L'Année Internationale du Listao, pp. 301-308.
Beckers J., Rixen M. 2003. EOF calculations and data filling from incomplete oceanographic data sets. J. Atmos. Ocean. Tech. 20: 1839-1856.
Beverton R.J.H., Holt S.J. 1957. On the dynamic of exploited fish populations. Chapman & Hall. London (1993 facsimilae reprint).
Cadima E.L. 2003. Manual de evaluación de recursos pesqueros. FAO Doc. Téc. Pesca 393, Rome, 162 pp.
Castillo S., Mendo J. 1987. Estimation of unregistered Peruvian achoveta (Engraulis ringens) in official catch statistic, 1951 to 1982. In: Pauly D., Tsukayama I. (eds), The Peruvian ancho-veta and its upwelling ecosystem: three decades of changes. ICLARM Studies and Reviews 15, pp. 109-116.
Cayré P., Farrugio H. 1986. Biologie de la reproduction du listao (Katsuwonus pelamis) de l'Océan Atlantique. In: Comptes-rendus de la Conference ICCAT sur le Programme de L'Année Internationale du Listao, pp. 252-272.
Cayré P., Diouf T., Fonteneau A., Santa Rita-Vieira M.H. 1986. Analyse des données de marquages et recaptures de listao (Kat-suwonus pelamis) realizés par le Sénégal et la République du Cap-Vert. In: Comptes-rendus de la Conference ICCAT sur le Programme de L'Année Internationale du Listao, pp. 309-316.
Chen Y., Chen L., Stergiou K.I. 2003. Impact of data quantity on fisheries stock assessment. Aquat. Sci. 65: 92-98.
Cushing D.H. 1983. Key papers on fish populations. IRL Press.
Daw T., Gray T. 2005. Fisheries science and sustainability in international policy: a study of failure in the European Union's Common Fisheries Policy. Mar. Pol. 29: 189-197.
Dowling N.A., Smith D.C., Knuckey I., Smith A.D.M., Domaschez O., Patterson H.M., Whitelaw W. 2008. Developing harvest strategies for low-value and data-poor fisheries: Case studies from three Australian fisheries. Fish. Res. 94: 380-390.
Farrugio H. 1993. Methods to analyse the dynamics of exploited marine populations: sampling methods. In: Lleonart J. (ed.), Northwestern Mediterranean Fisheries. Sci. Mar. 57(2-3): 255-259.
Fonteneau A., Pallares-Soubrier P. 1996. Interactions between tuna fisheries: A global review with specific examples from the Atlantic Ocean. FAO Fish. Tech. Pap. 365: 84-123.
Gómez-Muñoz V.M. 1990. A model to estimate catches from a short fishery statistics survey. Bull. Mar. Sci. 46(3): 719-722.
González-Ramos A. 1992. Bioecología del Listado (Katsuwonus pelamis Linnaeus, 1758) en el área de Canarias. Modelo de gestión y explotación mediante el uso de la teledetección. PhD thesis, Universidad de Las Palmas de Gran Canaria, 196 pp.
Gouveia, L., Mejuto, J. 2003. Seasonality and interannual variability in catches of skipjack tuna (Katsuwonus pelamis) and bigeye tuna (Thunnus obesus) in the area around the archipelago of Madeira. Collect. Vol. Sci. Pap. ICCAT, 55(5): 1853-1867.
ICCAT. 2008. Report of the 2007 meeting of the working group on stock assessment methods. ICCAT Document SCRS/2007/011. Coll. Vol. Sci. Pap. ICCAT, 62(6): 1892-1972.
ICES. 2005. Report of the Working Group on the Assessment of Northern Shelf Demersal Stocks (WGNSDS). ICES Document CM 2006/ACFM: 13, 803 pp.
International Commission for the Conservation of Atlantic Tunas (ICCAT) (http://www.iccat.int/en/accesingdb.htm)
Kelleher K. 2005. Discards in the world's marine fisheries. An update. FAO Fish. Tech. Pap. 470, Rome, 131 pp.
Kelly C.J., Codling E.A. 2006. "Cheap and dirty" fisheries science and management in the North Atlantic. Fish. Res. 79: 233-238.
Kennelly S.J., Broadhurst M.K. 2002. By-catch begone: changes in the philosophy of fishing technology. Blackwell Science Ltd., Fish and Fisheries Series, 3: 340-355.
Lleonart J. 1993. Methods to analyse the dynamics of exploited marine populations: use and development of models. In: Lleonart, J. (ed.), Northwestern Mediterranean Fisheries. Sci. Mar. 57(2-3): 261-267.
Lloret J., Zaragoza N., Caballero D., Font T., Casadevall M., Riera V. 2008. Spearfishing pressure on fish communities in rocky coastal habitat in a Mediterranean marine protected area. Fish. Res. 94: 84-91.
Maunder M.N., Deriso R.B. 2010. Dealing with missing covariate data in fishery stock assessment models. Fish. Res. 101(1-2): 80-86.
Ménard F., Fontenaeu A., Gaertner D., Nordstrom V., Stéquert B., Marchal E. 2000. Exploitation of small tunas by a purse-seine fishery with fish aggregating devices and their feeding ecology in an eastern tropical Atlantic ecosystem. ICES J. Mar. Sci. 57(3): 525-530.
Miyabe N., Bard F. 1986. Actividades de marcado en las Canarias para el programa listado. In: Proc. ICCAT Intl. Skipjack Yr. Prog, pp. 342-347.
Morales-Nin B., Moranta J., García C., Tugores M.P., Grau A.M., Riera F., Cerda M. 2005. The recreational fishery off Majorca Island (western Mediterranean): some implications for coastal resource management. ICES J. Mar. Sci. 62: 727-739.
Miyake M.P., Miyabe N., Nakano H., 2004. Historical trends of tuna catches in the world. FAO Fish. Tech. Pap. 467: 1-74.
Pallarés P., Delgado de Molina A., Ariz J., Santana J.C., Delgado de Molina R. 2005. Esfuerzo de la pesquería artesanal de túnidos de las Islas Canarias. Col. Vol. Sci. Pap. ICCAT 58(1): 183-191.
Pang L., Pauly D. 2001. Chinese marine capture fisheries from 1950 to the late 1990s: the hopes, plans and data. In: Watson R., Pang L., Pauly D. (eds), The marine fisheries of China: development and reported catches. Fish. Centre Res. Rep. 9(2): 1-27.
Patterson K., Cook R., Davis C., Gavaris S., Kell L., Levy P., Mesnil B., Punt A., Restrepo V., Skagen D.W., Stefansson G. 2001. Estimating uncertainty in fish stock assessment and forecasting. Fish Fish. 2: 125-157.
Pauly D. 2009. Beyond duplicity and ignorance in global fisheries. Sci. Mar. 73(2): 215-224.
Punt A.E., Hilborn R. 1997. Fisheries stock assessment and decision analysis: the Bayesian approach. Rev. Fish Biol. Fish. 7: 35-63.
Quinn T.J., Deriso, R.B. 1999. Quantitative fish dynamics. Oxford UP.
Scandol J. 2004. A framework for the assessment of harvested fish resources in NSW. NSW Department of Primary Industries, Fish. Res. Assess. Ser. 15, 44 pp.
Solari, A.P., Castro, J.J., Bas, C. 2003. On skipjack tuna dynamics: similarity at several scales. In: Seuront, L. and Strutton, P.G. (eds), Handbook of scaling methods in aquatic ecology: Measurement, analysis, simulation. CRC Press, London, 624 pp.
Toumazou V., Cretaux J. 2001. Using a Lanczos eigensolver in the computation of empirical orthogonal functions. Mon. Weather Rev. 129: 1243-1250.
Trujillo-Santana, A. 2010. Estudio de la pesquería artesanal de cebo vivo sobre Katsuwonus pelamis en los archipiélagos at-lánticos hispanolusos y Golfo de Vizcaya. Universidad de Las Palmas de Gran Canaria, 124 pp.
Watson R., Pauly D. 2001. Systematic distortions in world fisheries catch trends. Nature 414: 534-536.
Wilks D. 1995. Statistical Methods in the Atmospheric Science. Elsevier, New York, 467 pp.
Similar publications
Sorry the service is unavailable at the moment. Please try again later.
This website uses cookies to improve user experience. Read more
Save & Close
Accept all
Decline all
Show detailsHide details
Cookie declaration
About cookies
Strictly necessary
Performance
Strictly necessary cookies allow core website functionality such as user login and account management. The website cannot be used properly without strictly necessary cookies.
This cookie is used by Cookie-Script.com service to remember visitor cookie consent preferences. It is necessary for Cookie-Script.com cookie banner to work properly.
Performance cookies are used to see how visitors use the website, eg. analytics cookies. Those cookies cannot be used to directly identify a certain visitor.
Used to store the attribution information, the referrer initially used to visit the website
Cookies are small text files that are placed on your computer by websites that you visit. Websites use cookies to help users navigate efficiently and perform certain functions. Cookies that are required for the website to operate properly are allowed to be set without your permission. All other cookies need to be approved before they can be set in the browser.
You can change your consent to cookie usage at any time on our Privacy Policy page.