Article (Scientific journals)
DNA replication timing data corroborate in silico human replication origin predictions
Audit, Benjamin; Nicolay, Samuel; Huvet, Maxime et al.
2007In Physical Review Letters, 99, p. 248102
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Keywords :
wavelets, DNA, Timing data
Abstract :
[en] We develop a wavelet-based multiscale pattern recognition methodology to disentangle the replication- from the transcription-associated compositional strand asymmetries observed in the human genome. Comparing replication skew profiles to recent high-resolution replication timing data reveals that most of the putative replication origins that border the so-identified replication domains are replicated earlier than their surroundings whereas the central regions replicate late in the S phase. We discuss the implications of this first experimental confirmation of these replication origin predictions that are likely to be early replicating and active in most tissues.
Disciplines :
Mathematics
Author, co-author :
Audit, Benjamin
Nicolay, Samuel  ;  Université de Liège - ULiège > Département de mathématique > Analyse - Analyse fonctionnelle - Ondelettes
Huvet, Maxime
Touchon, Marie
d'Aubenton-Carafa, Yves
Thermes, Claude
Arneodo, Alain L.
Language :
English
Title :
DNA replication timing data corroborate in silico human replication origin predictions
Publication date :
2007
Journal title :
Physical Review Letters
ISSN :
0031-9007
eISSN :
1079-7114
Publisher :
American Physical Society, Ridge, United States - New York
Volume :
99
Pages :
248102
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBi :
since 12 January 2010

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