Fuzzy k-NN; Linear discriminant analysis; Moulds; Chemical sensor arrays
Abstract :
[en] The possibility to detect Aspergillus versicolor growing on different building materials by a metal oxide sensor array is studied. Results show that an accurate classification rate of 89 +/- 3% can be obtained combining an extended linear discriminant analysis plus a fuzzy k-NN classifier. The classification ability of the classifier is assessed within the dataset by crossvalidation and also in a second dataset collected 5 months later. There is a slight decrease in the classification performance for all the algorithms, being the most sensitive the most accurate one.
Disciplines :
Environmental sciences & ecology
Author, co-author :
Kuske, Martyna
Rubio, R.
Romain, Anne-Claude ; Université de Liège - ULiège > Département des sciences et gestion de l'environnement > Surveillance de l'environnement
Nicolas, Jacques ; Université de Liège - ULiège > Département des sciences et gestion de l'environnement > Surveillance de l'environnement
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Bibliography
Brunekreff, B., Verhoeff, A.P., Van Strien, R.T., Wijnen, J.H., Home dampness and childhood respiratory symptoms: The role of sensitization to dust mites and moulds (1994) Health Implications of Fungi in Indoor Environments, pp. 189-199. , Samson, et al. (Eds.)
Johanning, E., Biagini, R., Hull, D., Morey, P., Jarvis, B., Landsbergis, P., Health and immunology study following exposure to toxigenic fungi (Stachybotrys chartarum) in a water-damaged office environment (1996) Int. Arch. Occup. Environ. Health, 68, pp. 207-218
Klanova, K., The concentrations of mixed populations of fungi in indoor air: Rooms with and without mould problems rooms with and without health complaints (2000) Central Eur. J. Publ. Health, 8, pp. 59-61
Koskinen, O., Husman, T., Hyvärinen, A., Reponen, T., Nevalainen, A., Two moldy day-care centers: A follow-up study of respiratory symptoms and infections (1997) Indoor Air, 7, pp. 67-76
Norback, D., Wieslander, G., Nordstrom, K., Walinder, R., Asthma symptoms in relation to measured building dampness in upper concrete floor construction, and 2-ethyl-1-hexanol in indoor air (2000) Int. J. Tuberc. Lung Dis., 4, pp. 1016-1025
Walinder, R., Norback, D., Johanson, G., Pulmonary reactions after exposure to 3-methylfuran vapour, a fungal metabolite (1998) Int. J. Tuberc. Lung Dis., 2, pp. 1037-1039
Wang, G.H., Li, C.S., Indoor endotoxin and glucan in association with airway inflammation and systemic symptoms (1999) Arch. Environ. Health, 54, pp. 172-179
Wilson, C.E., Sudden infant death syndrome and Canadian aboriginals: Bacteria and infections (1999) FEMS Immunol. Med. Microbiol., 25, pp. 221-226
Fischer, G., Muller, T., Schwalbe, R., Ostrowski, R., Dott, W., Exposure to airborne fungi, MVOC and mycotoxins in biowaste-handling facilities (2000) Int. J. Hygiene Environ. Health, 203, pp. 97-104
Kiviranta, H., Tuomainen, A., Reiman, M., Laitinen, S., Liesivuori, J., Nevalainen, A., Qualitative identification of volatile metabolites from two fungi and three bacteria species cultivated on two media (1998) Central Eur. J. Publ. Health, 6, pp. 296-299
Sunesson, A.L., Nilsson, C.A., Andersson, B., Blomquist, G., Volatile metabolites produced by two fungal species cultivated on building materials (1996) Ann. Occup. Hygiene, 40, pp. 397-410
Bjurman, J., Kristensson, J., Volatile production by Aspergillus versicolor as a possible cause of odor in houses affected by fungi (1992) Mycopathologia, 118, pp. 173-178
Borjesson, T., Stollman, U., Schnurer, J., Volatile metabolites and other indicators of Penicillium aurantiogriseum growth on different substrates (1990) Appl. Environ. Microbiol., 56, pp. 3705-3710
Fiedler, K., Schutz, E., Geh, S., Detection of microbial volatile organic compounds (MVOCs) produced by moulds on various materials (2001) Int. J. Hygiene Environ. Health, 204, pp. 2-3
Horner, W., Worthan, A., Epstein, B., Black, M., (1999) MVOC Emission Patterns of Indoor Fungi: Strain and Culture Differences, , http://www.aiha.org/abs99/9pos3.html
Korpi, A., Pasanen, A.-L., Viitanen, H., Volatile metabolites of Serpula lacrymans, Coniophora puteana, Poria placenta, Stachybotrys chartarum and Chaetomium globosum (1999) Build. Environ., 34, pp. 205-211
Rose, L.J., Simmons, R.B., Crow, S.A., Ahearn, D.G., Volatile organic compounds associated with microbial growth in automobile air conditioning systems (2000) Curr. Microbiol., 41, pp. 206-209
Korpi, A., Pasanen, A.-L., Pasanen, P., Volatile compounds originating from mixed microbial cultures on building materials under various humidity conditions (1998) Appl. Environ. Microbiol., 64, pp. 2914-2919
Strom, G., West, J., Wessen, B., Palmgren, U., Quantitative analysis of microbial volatiles in damp Swedish houses (1994) Health Implications of Fungi in Indoor Environments, pp. 291-305. , Flannigan, et al. (Eds.) Elsevier, Amsterdam
Wilkins, K., Hansen, M.O., Larsen, K., MVOC analysis for detection of microbial growth in buildings II (1999) A New Sampling Method?, , http://www.asc.amr.dk/forskning/43rapporter/unders_bygn/Under_byg.pdf
Keller, R., Senkpiel, K., Ohgke, H., Use of MVOC measurements and odor perception as indicator of mould in indoor areas (1999) Bioaerosols, Fungi and Mycotoxins: Health Effects, Assessment, Prevention and Control, , E. Johanning, New York
Larsen, T.O., Frisvad, J., Production of volatiles and presence of mycotoxins in conidia of common indoor Penicillia and Aspergillii (1994) Health Implications of Fungi in Indoor Environments, pp. 251-279. , Flannigan, et al. (Eds.) Elsevier, Amsterdam
Martin, J., Gao, P., (2000) Volatile Metabolites Produced by Stachybotrys Chartarum on Rice and Gypsum Board, , http://www.aiha.org/abs00/0iaq.html
Olsson, J., Borjesson, T., Lundstedt, T., Schnurer, J., Volatiles for mycological quality grading of barley grains: Determinations using gas chromatography-mass spectrometry and electronic nose (2000) Int. J. Food Microbiol., 59, pp. 167-178
Pasanen, A.-L., Lappalainen, S., Pasanen, P., Volatile organic metabolites associated with some toxic fungi and their mycotoxins (1996) Analyst, 121, pp. 1949-1953
Schnurer, J., Olsson, J., Borjesson, T., Fungal volatiles as indicators of food and feeds spoilage (1999) Fungal Genet. Biol., 27, pp. 209-217
Sunesson, A.-L., Vaes, W.H.J., Nilsson, C.A., Blomquist, G., Andersson, B., Carlson, R., Identification of volatile metabolites from five fungal species cultivated on two media (1995) Appl. Environ. Microbiol., 61, pp. 2911-2918
Tuma, D., Sinha, R.N., Muir, W.E., Abramson, D., Odor volatiles associated with microflora in damp ventilated and non-ventilated bin-stored bulk wheat (1989) Int. J. Food Microbiol., 8, pp. 103-119
Wilkins, C.K., Scholl, S., Volatile metabolites of some barley storage molds (1989) Int. J. Food Microbiol., 8, pp. 11-17
Wilkins, K., Larsen, K., Variation of volatile organic compound patterns of mold species from damp buildings (1995) Chemosphere, 5, pp. 3225-3236
Jonnson, A., Winquist, F., Schnurer, J., Sundgren, H., Lundstrom, I., Electronic nose for microbial quality classification of grains (1997) Int. J. Food Microbiol., 35, pp. 187-193
Keshri, G., Magan, N., Voysey, P., Use of an electronic nose for the early detection and differentiation between spoilage fungi (1998) Lett. Appl. Microbiol., 27, pp. 261-264
Keshri, G., Magan, N., Detection and differentiation between mycotoxigenic and non mycotoxigenic strains of two Fusarium spp. using volatile production profiles and hydrolytic enzymes (2000) J. Appl. Microbiol., 89, pp. 825-833
Olsson, J., Borjesson, T., Lundstedt, T., Schnurer, J., Detection and quantification of ochratoxin A and deoxynivalenol in barley grains by GC-MS and electronic nose (2002) Int. J. Food Microbiol., 72, pp. 203-214
Schiffman, S.S., Wyrick, D.W., Payne, G.A., O'Brian, G., Nagle, H.T., Effectiveness of an electronic nose for monitoring bacterial and fungal growth (2000) Proceedings of the ISOEN 2000, pp. 173-180. , Brighton, July 20-24
Persaud, K.C., Wareham, P.D., Payne, P.A., Chueh, H., Hatfield, J.V., A portable electronic nose for dry rot detection (2001) Actes des Conférences "la Métrologie des Odeurs et les nez Électroniques", , Eurodeur, Airodeur Paris
Dudani, S.A., The distance weighted k-nearest neighbour rule (1976) IEEE Trans. Syst. Man. Cyber., 6, pp. 325-327
Baily, T., Jain, A.K., A note on distance-weighted k-nearest neighbour rules (1978) IEEE Trans. Syst. Man. Cyber., 8, pp. 311-313
Dasarathy, B.V., (1991) Nearest Neighbor Norms: NN Pattern Classification Techniques, , IEEE Computer Society Press, Los Alamitos, CA
Morin, R.L., Reaside, D.E., A reaprisal of distance weighted k-NN classification for pattern recognition with missing data (1981) IEEE Trans. Syst. Man. Cyber., 11, pp. 241-243
MacLeod, J.E., Luk, A., Titterington, D.M., A re-examination of the distance weighted k-NN classification rule (1987) IEEE Trans. Syst. Man Cyber., 15, pp. 580-585
Dubuisson, B., Masson, M., A statistical decision rule with incomplete knowledge about the classes (1993) Pattern Recog., 26, pp. 155-165
Kim, Y.K., Han, J.H., Fuzzy k-NN Algorithm using modified k-selection (1995) Proceedings of the Fourth IEEE International Conference on Fuzzy Systems, 3, pp. 1673-1679. , March 20-24
Denoeux, T., A k-nearest neighbor classification rule based on Dempster-Shafer theory (1995) IEEE Trans. Syst. Man. Cyber., 25, pp. 804-813
Marcelloni, F., Recognition of olfactory signals based on supervised c-means and k-NN algorithms (2001) Pattern Recog. Lett., 21, pp. 1007-1019
Pedrycz, W., Waletzky, J., Fuzzy clustering with partial supervision (1997) IEEE Trans. Syst. Man. Cyber. B, 27, pp. 787-795
De Rita, C.R., Vidal, S.L., A validity measure for hard and fuzzy clustering derived from Fisher's linear discriminant (2002) Proceedings of the IEEE International Conference on Fuzzy Systems (FUZZ-IEEE'2002), pp. 1493-1498. , May 12-17, 2002
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