The Argonaute protein TbAGO1 contributes to large and mini-chromosome segregation and is required for control of RIME retroposons and RHS pseudogene-associated transcripts.
Menzer, Linda ; Université de Liège - ULiège > GIGA - Utilisateurs machines
Ngwabyt, Sandra
Ersfeld, K
Bastin, Philippe
Language :
English
Title :
The Argonaute protein TbAGO1 contributes to large and mini-chromosome segregation and is required for control of RIME retroposons and RHS pseudogene-associated transcripts.
Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., and Mello C.C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391 (1998) 806-811
Cerutti H., and Casas-Mollano J.A. On the origin and functions of RNA-mediated silencing: from protists to man. Curr Genet 50 (2006) 81-99
Sontheimer E.J. Assembly and function of RNA silencing complexes. Nat Rev Mol Cell Biol 6 (2005) 127-138
Song J.J., Smith S.K., Hannon G.J., and Joshua-Tor L. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305 (2004) 1434-1437
Liu J., Carmell M.A., Rivas F.V., et al. Argonaute2 is the catalytic engine of mammalian RNAi. Science 305 (2004) 1437-1441
Ketting R.F., Haverkamp T.H., van Luenen H.G., and Plasterk R.H. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell 99 (1999) 133-141
Tabara H., Sarkissian M., Kelly W.G., et al. The rde-1 gene, RNA interference, and transposon silencing in C. elegans. Cell 99 (1999) 123-132
Nolan T., Braccini L., Azzalin G., De Toni A., Macino G., and Cogoni C. The post-transcriptional gene silencing machinery functions independently of DNA methylation to repress a LINE1-like retrotransposon in Neurospora crassa. Nucleic Acids Res 33 (2005) 1564-1573
Volpe T.A., Kidner C., Hall I.M., Teng G., Grewal S.I., and Martienssen R.A. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297 (2002) 1833-1837
Zilberman D., Cao X., and Jacobsen S.E. ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation. Science 299 (2003) 716-719
Fagard M., Boutet S., Morel J.B., Bellini C., and Vaucheret H. AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals. Proc Natl Acad Sci USA 97 (2000) 11650-11654
Hall I.M., Noma K., and Grewal S.I. RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast. Proc Natl Acad Sci USA 100 (2003) 193-198
Deshpande G., Calhoun G., and Schedl P. Drosophila argonaute-2 is required early in embryogenesis for the assembly of centric/centromeric heterochromatin, nuclear division, nuclear migration, and germ-cell formation. Genes Dev 19 (2005) 1680-1685
Yigit E., Batista P.J., Bei Y., et al. Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127 (2006) 747-757
Clayton C.E. Life without transcriptional control? From fly to man and back again. EMBO J 21 (2002) 1881-1888
Bastin P., Sherwin T., and Gull K. Paraflagellar rod is vital for trypanosome motility. Nature 391 (1998) 548
Ngo H., Tschudi C., Gull K., and Ullu E. Double-stranded RNA induces mRNA degradation in Trypanosoma brucei. Proc Natl Acad Sci USA 95 (1998) 14687-14692
Motyka S.A., and Englund P.T. RNA interference for analysis of gene function in trypanosomatids. Curr Opin Microbiol 7 (2004) 362-368
Durand-Dubief M., and Bastin P. TbAGO1, an argonaute protein required for RNA interference, is involved in mitosis and chromosome segregation in Trypanosoma brucei. BMC Biol 1 (2003) 2
Ullu E., Tschudi C., and Chakraborty T. RNA interference in protozoan parasites. Cell Microbiol 6 (2004) 509-519
Robinson K.A., and Beverley S.M. Improvements in transfection efficiency and tests of RNA interference (RNAi) approaches in the protozoan parasite Leishmania. Mol Biochem Parasitol 128 (2003) 217-228
DaRocha W.D., Otsu K., Teixeira S.M., and Donelson J.E. Tests of cytoplasmic RNA interference (RNAi) and construction of a tetracycline-inducible T7 promoter system in Trypanosoma cruzi. Mol Biochem Parasitol 133 (2004) 175-186
Shi H., Djikeng A., Tschudi C., and Ullu E. Argonaute protein in the early divergent eukaryote Trypanosoma brucei: control of small interfering RNA accumulation and retroposon transcript abundance. Mol Cell Biol 24 (2004) 420-427
Djikeng A., Shi H., Tschudi C., and Ullu E. RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs. RNA 7 (2001) 1522-1530
Shi H., Chamond N., Tschudi C., and Ullu E. Selection and characterization of RNA interference-deficient trypanosomes impaired in target mRNA degradation. Eukaryot Cell 3 (2004) 1445-1453
Shi H., Tschudi C., and Ullu E. An unusual Dicer-like1 protein fuels the RNA interference pathway in Trypanosoma brucei. RNA 12 (2006) 2063-2072
Janzen C.J., van Deursen F., Shi H., Cross G.A., Matthews K.R., and Ullu E. Expression site silencing and life-cycle progression appear normal in Argonaute1-deficient Trypanosoma brucei. Mol Biochem Parasitol 149 (2006) 102-107
Hasan G., Turner M.J., and Cordingley J.S. Complete nucleotide sequence of an unusual mobile element from Trypanosoma brucei. Cell 37 (1984) 333-341
Kimmel B.E., ole-MoiYoi O.K., and Young J.R. Ingi, a 5,2-kb dispersed sequence element from Trypanosoma brucei that carries half of a smaller mobile element at either end and has homology with mammalian LINEs. Mol Cell Biol 7 (1987) 1465-1475
Murphy N.B., Pays A., Tebabi P., et al. Trypanosoma brucei repeated element with unusual structural and transcriptional properties. J Mol Biol 195 (1987) 855-871
Berriman M., Ghedin E., Hertz-Fowler C., et al. The genome of the African trypanosome Trypanosoma brucei. Science 309 (2005) 416-422
Bringaud F., Biteau N., Melville S.E., et al. A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei. Eukaryot Cell 1 (2002) 137-151
Pays E. Regulation of antigen gene expression in Trypanosoma brucei. Trends Parasitol 21 (2005) 517-520
Ersfeld K., Melville S.E., and Gull K. Nuclear and genome organization of Trypanosoma brucei. Parasitol Today 15 (1999) 58-63
Ersfeld K., and Gull K. Partitioning of large and minichromosomes in Trypanosoma brucei. Science 276 (1997) 611-614
Bastin P., MacRae T.H., Francis S.B., Matthews K.R., and Gull K. Flagellar morphogenesis: protein targeting and assembly in the paraflagellar rod of trypanosomes. Mol Cell Biol 19 (1999) 8191-8200
Sherwin T., and Gull K. The cell division cycle of Trypanosoma brucei brucei: timing of event markers and cytoskeletal modulations. Philos Trans R Soc Lond B Biol Sci 323 (1989) 573-588
Ploubidou A., Robinson D.R., Docherty R.C., Ogbadoyi E.O., and Gull K. Evidence for novel cell cycle checkpoints in trypanosomes: kinetoplast segregation and cytokinesis in the absence of mitosis. J Cell Sci 112 (1999) 4641-4650
Kohl L., Sherwin T., and Gull K. Assembly of the paraflagellar rod and the flagellum attachment zone complex during the Trypanosoma brucei cell cycle. J Eukaryot Microbiol 46 (1999) 105-109
Kohl L., Robinson D., and Bastin P. Novel roles for the flagellum in cell morphogenesis and cytokinesis of trypanosomes. EMBO J 22 (2003) 5336-5346
Branche C., Kohl L., Toutirais G., Buisson J., Cosson J., and Bastin P. Conserved and specific functions of axoneme components in trypanosome motility. J Cell Sci 119 (2006) 3443-3455
Durand-Dubief M., Kohl L., and Bastin P. Efficiency and specificity of RNA interference generated by intra- and intermolecular double stranded RNA in Trypanosoma brucei. Mol Biochem Parasitol 129 (2003) 11-21
Erondu N.E., and Donelson J.E. Differential expression of two mRNAs from a single gene encoding an HMG1-like DNA binding protein of African trypanosomes. Mol Biochem Parasitol 51 (1992) 111-118
Catez F., Yang H., Tracey K.J., Reeves R., Misteli T., and Bustin M. Network of dynamic interactions between histone H1 and high-mobility-group proteins in chromatin. Mol Cell Biol 24 (2004) 4321-4328
Ralston K.S., Lerner A.G., Diener D.R., and Hill K.L. Flagellar motility contributes to cytokinesis in Trypanosoma brucei and is modulated by an evolutionarily conserved dynein regulatory system. Eukaryot Cell 5 (2006) 696-711
Bringaud F., Biteau N., Zuiderwijk E., et al. The ingi and RIME non-LTR retrotransposons are not randomly distributed in the genome of Trypanosoma brucei. Mol Biol Evol 21 (2004) 520-528
Wu-Scharf D., Jeong B., Zhang C., and Cerutti H. Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase. Science 290 (2000) 1159-1162
Sijen T., and Plasterk R.H. Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi. Nature 426 (2003) 310-314
Tilley A., Welburn S.C., Fevre E.M., Feil E.J., and Hide G. Trypanosoma brucei: trypanosome strain typing using PCR analysis of mobile genetic elements (MGE-PCR). Exp Parasitol 104 (2003) 26-32
Sigova A., Rhind N., and Zamore P.D. A single Argonaute protein mediates both transcriptional and posttranscriptional silencing in Schizosaccharomyces pombe. Genes Dev 18 (2004) 2359-2367
Grewal S.I., and Jia S. Heterochromatin revisited. Nat Rev Genet 8 (2007) 35-46
Ogbadoyi E., Ersfeld K., Robinson D., Sherwin T., and Gull K. Architecture of the Trypanosoma brucei nucleus during interphase and mitosis. Chromosoma 108 (2000) 501-513
Wickstead B., Ersfeld K., and Gull K. Repetitive elements in genomes of parasitic protozoa. Microbiol Mol Biol Rev 67 (2003) 360-375