Article (Scientific journals)
Estimation by simulation of the efficiency of the French marker-assisted selection program in dairy cattle.
Guillaume, François; Fritz, Sébastien; Boichard, Didier et al.
2008In Genetics, Selection, Evolution, 40 (1), p. 91-102
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Keywords :
Animals; Cattle; Computer Simulation; Dairying/methods; Efficiency; Efficiency, Organizational; Female; France; Genetic Markers; Genotype; Male; Models, Genetic; Pedigree; Quantitative Trait Loci
Abstract :
[en] The efficiency of the French marker-assisted selection (MAS) was estimated by a simulation study. The data files of two different time periods were used: April 2004 and 2006. The simulation method used the structure of the existing French MAS: same pedigree, same marker genotypes and same animals with records.The program simulated breeding values and new records based on this existing structure and knowledge on the QTL used in MAS (variance and frequency). Reliabilities of genetic values of young animals (less than one year old) obtained with and without marker information were compared to assess the efficiency of MAS for evaluation of milk, fat and protein yields and fat and protein contents. Mean gains of reliability ranged from 0.015 to 0.094 and from 0.038 to 0.114 in 2004 and 2006, respectively. The larger number of animals genotyped and the use of a new set of genetic markers can explain the improvement of MAS reliability from 2004 to 2006. This improvement was also observed by analysis of information content for young candidates. The gain of MAS reliability with respect to classical selection was larger for sons of sires with genotyped progeny daughters with records. Finally, it was shown that when superiority of MAS over classical selection was estimated with daughter yield deviations obtained after progeny test instead of true breeding values, the gain was underestimated.
Disciplines :
Agriculture & agronomy
Genetics & genetic processes
Animal production & animal husbandry
Author, co-author :
Guillaume, François
Fritz, Sébastien
Boichard, Didier
Druet, Tom ;  Institut Scientifique de Recherche Agronomique - INRA > Département de Génétique Animale > Station de Génétique Quantitative et Appliquée
Language :
English
Title :
Estimation by simulation of the efficiency of the French marker-assisted selection program in dairy cattle.
Publication date :
2008
Journal title :
Genetics, Selection, Evolution
ISSN :
0999-193X
eISSN :
1297-9686
Publisher :
BioMed Central, United Kingdom
Volume :
40
Issue :
1
Pages :
91-102
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBi :
since 07 May 2010

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