Multi-scale modelling; Bioinformatics; Molecular Dynamics; mycosubtilin; iturin; bacillomycin; surfactin; surfactant; interface; Langmuir monolayers; Second Harmonic Generation; hyperpolarizability; non linear optics
Abstract :
[en] The optical Second Harmonic Generation (SHG) of Mycosubtilin Langmuir Layers at the air/water interface are modeled. In this tyrosine-containing lipopepeptide, the environment of the tyrosine residue is critical in defining the SHG response. To propose reasonable the structure of Mycosubtilin aggregates at the air-water interface, molecular dynamics simulations (all-atom and coarse-grained) are performed. Molecular hyperpolarizability of the lipopeptide are obtained by Quantum Chemistry calculations. Finally, the SHG susceptibilities of the interface are calculated using a simple additive model. The molecular dynamics simulations suggest that lipopeptides aggregate at the interface into half-micelles, and that this phenomena is the origin of a constraint on Tyrosine orientation. In particular the C-OH bond of the Tyrosine residue has a preferential orientation along the interface normal, pointing towards the air. This inhomogneneous orientation distribution, associated with a dominant hyperpolarizability component along the C-OH bond of the Tyrosine, yields a characteristic SHG response. Comparison with experimental data gathered in our lab are proposed.
Disciplines :
Biochemistry, biophysics & molecular biology
Author, co-author :
Loison, Claire
Nasir, Mehmet Nail ; Université de Liège - ULiège > Chimie et bio-industries > Chimie générale et organique
Benichou, Emmanuel
Besson, Françoise
Brevet, Pierre-François
Language :
English
Title :
Multi-Scale Modelisation of the Optical Second Harmonic Generation of Tyrosine-Containing Iturinic Antimicrobial Lipopeptides
Publication date :
2013
Event name :
Frontiers of computational biomolecular spectroscopy and mass spectrometry
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