Publications and communications of Marylène Vandevenne

Gemander, N., Kemlin, D., Depickère, S., Kelkar, N. S., Pannus, P., Sharma, S., Waegemans, A., Olislagers, V., Georges, D., Dhondt, E., Braga, M., Heyndrickx, L., Michiels, J., Thiriard, A., Lemy, A., Vandevenne, M., Goossens, M. E., Matagne, A., Desombere, I., ... Marchant, A. (March 2024). Hybrid Immunity Overcomes Defective Immune Response to COVID-19 Vaccination in Kidney Transplant Recipients. Kidney International Reports, 9 (3), 635 - 648. doi:10.1016/j.ekir.2023.12.008

Kemlin, D., Gemander, N., Depickère, S., Olislagers, V., Georges, D., Waegemans, A., Pannus, P., Lemy, A., Goossens, M. E., Desombere, I., Michiels, J., Vandevenne, M., Heyndrickx, L., Ariën, K. K., Matagne, A., Ackerman, M. E., Le Moine, A., & Marchant, A. (10 February 2023). Humoral and cellular immune correlates of protection against COVID-19 in kidney transplant recipients. American Journal of Transplantation, 23 (5), 649 - 658. doi:10.1016/j.ajt.2023.02.015

Robert, C., Kerff, F., Bouillenne, F., Gavage, M., Vandevenne, M., Filée, P., & Matagne, A. (2023). Structural analysis of the interaction between human cytokine BMP-2 and the antagonist Noggin reveals molecular details of cell chondrogenesis inhibition. Journal of Biological Chemistry, 102892. doi:10.1016/j.jbc.2023.102892

Hu, Y., Romão, E., Vincke, C., Brys, L., Elkrim, Y., Vandevenne, M., Liu, C., & Muyldermans, S. (2021). Intrabody targeting HIF-1α mediates transcriptional downregulation of target genes related to solid tumors. International Journal of Molecular Sciences, 22 (22), 12335. doi:10.3390/ijms222212335

De Franco, S., Vandenameele, J., Brans, A., Verlaine, O., Bendak, K., Damblon, C., Matagne, A., Segal, D., Galleni, M., Mackay, J., & Vandevenne, M. (21 February 2019). Exploring the suitability of RanBP2-type Zinc Fingers for RNA-binding protein design. Scientific Reports, 9 (1), 2484. doi:10.1038/s41598-019-38655-y

Madland, E., Crasson, O., Vandevenne, M., Sørlie, M., & Aachmann, F. L. (2019). NMR and Fluorescence Spectroscopies Reveal the Preorganized Binding Site in Family 14 Carbohydrate-Binding Module from Human Chitotriosidase. ACS Omega, 4 (26), 21975-21984. doi:10.1021/acsomega.9b03043

Dondelinger, M., Filée, P., Sauvage, E., Quinting, B., Muyldermans, S., Galleni, M., & Vandevenne, M. (16 October 2018). Understanding the significance and implications of antibody numbering and antigen-binding surface/residue definition. Frontiers in Immunology, 9 (OCT). doi:10.3389/fimmu.2018.02278

Cawez, F., Duray, E., Hu, Y., Vandenameele, J., Romao, E., Vinckle, C., Dumoulin, M., Galleni, M., Muyldermans, S., & Vandevenne, M. (25 May 2018). Combinatorial Design of a Nanobody that Specifically Targets Structured RNAs. Journal of Molecular Biology, 430 (11), 1652-1670. doi:10.1016/j.jmb.2018.03.032

Vandevenne, M., Dondelinger, M., Yunus, S., Freichels, A., Freichels, R., Crasson, O., Rhazi, N., Bogaerts, P., Galleni, M., & Filée, P. (2018). The use of a β-lactamase – based conductimetric biosensor assay to detect biomolecular interactions. Journal of Visualized Experiments, (132). doi:10.3791/55414

Crasson, O., Courtade, G., Léonard, R., Aachmann, F., Legrand, F., Parente, R., Baurain, D., Galleni, M., Sorlie, M., & Vandevenne, M. (2017). Human chitotriosidase: Catalytic domain or carbohydrate binding module, who's leading HCHT's biological function. Scientific Reports, 7 (1). doi:10.1038/s41598-017-02382-z

Blythe, A., Yazar-Klosinski, B., Webster, M., Chen, E., Vandevenne, M., Bendak, K., Mackay, J., Hartzog, G., & Vrielink, A. (2016). The yeast transcription elongation factor Spt4/5 is a sequence-specific RNA binding protein. Protein Science: A Publication of the Protein Society, 25 (9), 1710-1721. doi:10.1002/pro.2976

Figueroa Yévenes, M., Sleutel, M., Vandevenne, M., Parvizi, G., Attout, S., Jacquin, O., Vandenameele, J., Fischer, A. W., Damblon, C., Goormaghtigh, E., Valerio-Lepiniec, M., Urvoas, A., Durand, D., Pardon, E., Steyaert, J., Minard, P., Maes, D., Meiler, J., Matagne, A., ... Van de Weerdt, C. (2016). The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools. Journal of Structural Biology. doi:10.1016/j.jsb.2016.05.004

Silva, A., Ryan, D., Galanty, Y., Low, J., Vandevenne, M., Jackson, S., & Mackay, J. (2015). The N-terminal region of CHD4 is essential for activity and contains a HMG-box-like-domain that can bind poly(ADP-ribose). Journal of Biological Chemistry.

Shepherd, N., Gamsjaeger, R., Vandevenne, M., & Cubbedu, L. (February 2015). Site directed nitroxide spin labeling of oligonucleotides for NMR and EPR studies. Tetrahedron, 71 (5), 813-819. doi:10.1016/j.tet.2014.12.056

Sue, X. C., Wang, Y., Yagi, H., Shishmarev, D., Mason, C. E., Smith, P. J., Vandevenne, M., Dixon, N. E., & Otting, G. (2014). Bound or free: interaction of the C-terminal domain of Escherichia coli single-stranded DNA-binding protein (SSB) with the tetrameric core of SSB. Biochemistry.

Vandevenne, M., O'Connell, M. R., Helder, S., Shepherd, N. E., Matthews, J. M., Kwan, A. H., Segal, D. J., & Mackay, J. P. (2014). Engineering Specificity Changes on a RanBP2 Zinc Finger that Binds Single-Stranded RNA. Angewandte Chemie International Edition. doi:10.1002/anie.201402980

Gamsjaeger, R., O'Connell, M. R., Cubeddu, L., Shepherd, N. A., Lowry, J. A., Kwan, A. H., Vandevenne, M., Swanton, M. K., Matthews, J. M., & Mackay, J. P. (2013). A structural analysis of DNA binding by myelin transcription factor 1 double zinc fingers. Journal of Biological Chemistry. doi:10.1074/jbc.M113.482075

Vandevenne, M., Jacques, D. A., Artuz, C. D., Nguyen, C. D., Kwan, A. H., Segal, D. J., Matthews, J. M., Crossley, M., Guss, J. M., & Mackay, J. P. (2013). New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217. Journal of Biological Chemistry. doi:10.1074/jbc.M112.441451

O'Connell, M. R., Vandevenne, M., Nguyen, C. D., Matthews, J. M., Gamsjaeger, R., Segal, D. J., & Mackay, J. P. (2012). Modular assembly of RanBP2-type zinc finger domains to target single- stranded RNA. Angewandte Chemie International Edition. doi:10.1002/anie.201200866

Vandevenne, M., Galleni, M., & Filée, P. (2012). How to make good use of a “bad” enzyme: utilization of efficient β-lactamases for the benefits of biochemical research. In J.-M. Frère (Ed.), β-lactamases (pp. 479-503). Indiana, United States: Nova Science.

Nunez, N., Clifton, M. M., Funnell, A. P., Artuz, C., Hallal, S., Quinlan, K. G., Font, J., Vandevenne, M., Setiyaputra, S., Pearson, R. C., Mackay, J. P., & Crossley, M. (2011). The multi-zinc finger protein ZNF217 contacts DNA through a two-finger domain. Journal of Biological Chemistry. doi:10.1074/jbc.M111.301234

Vandevenne, M., Campisi, V., Freichels, A., Gillard, C., Gaspard, G., Frère, J.-M., Galleni, M., & Filée, P. (2011). Comparative functional analysis of the human macrophage chitotriosidase. Protein Science: A Publication of the Protein Society. doi:10.1002/pro.676

Vandevenne, M., GASPARD, G., Belgsir, E. M., Ramnath, M., Cenatiempo, Y., Delneuville, D., Dumoulin, M., Frère, J.-M., Matagne, A., Galleni, M., & Filee, P. (2011). Effects of monopropanediamino-beta-cyclodextrin on the denaturation process of the hybrid protein BlaPChBD. Biochimica et Biophysica Acta. doi:10.1016/j.bbapap.2011.05.007

Vandevenne, M., Gaspard, G., Yilmaz, N., Giannotta, F., Frère, J.-M., Galleni, M., & Filée, P. (2008). Rapid and easy development of versatile tools to study protein/ligand interactions. Protein Engineering, Design and Selection. doi:10.1093/protein/gzn021

Vandevenne, M., Filée, P., Scarafone, N., Cloes, B., Gaspard, G., Yilmaz, N., Dumoulin, M., François, J.-M., Frère, J.-M., & Galleni, M. (2007). The Bacillus licheniformis BlaP beta-lactamase as a model protein scaffold to study the insertion of protein fragments. Protein Science: A Publication of the Protein Society, 16 (10), 2260-71. doi:10.1110/ps.072912407