Publications and communications of Damien Thiry

Desmecht, S.* , Latka, A.* , Ceyssens, P.-J., Garcia-Pino, A., Gillis, A., Lavigne, R., Lima-Mendez, G., Matthijnssens, J., Vázquez, R., Venneman, J., Wagemans, J., Briers, Y.* , & Thiry, D.*. (15 February 2024). Meeting Report of the Second Symposium of the Belgian Society for Viruses of Microbes and Launch of the Phage Valley. Viruses, 16 (2), 299. doi:10.3390/v16020299

Navez, M., Antoine, C., Laforêt, F., Thiry, D., Delcenserie, V., & Taminiau, B. (September 2023). In Vitro Effect on Piglet Gut Microbiota and In Vivo Assessment of Newly Isolated Bacteriophages against F18 Enterotoxigenic Escherichia coli (ETEC) [Poster presentation]. BSVoM, Liège, Belgium.

Ikeda, R., Laforêt, F., Antoine, C., Adachi, M., Nakamura, K., Habets, A., Kler, C., De Rauw, K., Hayashi, T., Mainil, J.* , & Thiry, D.*. (29 June 2023). Virulence of Shigatoxigenic and Enteropathogenic Escherichia coli O80:H2 in Galleria mellonella Larvae: Comparison of the Roles of the pS88 Plasmids and STX2d Phage. Veterinary Sciences, 10 (7), 420. doi:10.3390/vetsci10070420

Antoine, C., Laforêt, F., Goya-Jorge, E., Gonza Quito, I. E., Lebrun, S., Douny, C., Duprez, J.-N., Fall, A., Taminiau, B., Scippo, M.-L., Daube, G., Thiry, D.* , & Delcenserie, V.*. (24 June 2023). Phage Targeting Neonatal Meningitis E. coli K1 In Vitro in the Intestinal Microbiota of Pregnant Donors and Impact on Bacterial Populations. International Journal of Molecular Sciences, 24 (13), 10580. doi:10.3390/ijms241310580

Tabare, E., Dauchot, T., Cochez, C., Glonti, T., Antoine, C., Laforêt, F., Pirnay, J.-P., Delcenserie, V., Thiry, D., & Goole, J. (27 May 2023). Eudragit® FS Microparticles Containing Bacteriophages, Prepared by Spray-Drying for Oral Administration. Pharmaceutics, 15, 1602. doi:10.3390/pharmaceutics15061602

Latka, A., Aertsen, A., Boeckaerts, D., Blasdel, B., Ceyssens, P.-J., Garcia-Pino, A., Gillis, A., Lavigne, R., Lima-Mendez, G., Matthijnssens, J., Onsea, J., Peeters, E., Pirnay, J.-P., Thiry, D., Vandenheuvel, D., Van Mechelen, E., Venneman, J., Verbeken, G., Wagemans, J., & Briers, Y. (22 May 2023). Foundation of the Belgian Society for Viruses of Microbes and Meeting Report of Its Inaugural Symposium. Viruses, 15 (1213). doi:10.3390/v15051213

Crettels, L.* , Champon, L.* , Burlion, N., Delrée, E., Saegerman, C., & Thiry, D. (May 2023). Antimicrobial resistant Escherichia coli prevalence in freshwaters in Belgium and human exposure risk assessment. Heliyon, 9 (6), 16538. doi:10.1016/j.heliyon.2023.e16538

Navez, M., Antoine, C., Laforêt, F., Goya-Jorge, E., Douny, C., Scippo, M.-L., Vermeersch, M., Duprez, J.-N., Daube, G., Mainil, J., Taminiau, B., Delcenserie, V., & Thiry, D. (25 April 2023). In Vitro Effect on Piglet Gut Microbiota and In Vivo Assessment of Newly Isolated Bacteriophages against F18 Enterotoxigenic Escherichia coli (ETEC). Viruses, 15 (5), 1053. doi:10.3390/v15051053

Laforêt, F., Antoine, C., Lebrun, S., Gonza Quito, I. E., Goya-Jorge, E., Douny, C., Duprez, J.-N., Scippo, M.-L., Taminiau, B., Daube, G., Fall, A., Thiry, D.* , & Delcenserie, V.*. (10 March 2023). Impact Assessment of vB_KpnP_K1-ULIP33 Bacteriophage on the Human Gut Microbiota Using a Dynamic In Vitro Model. Viruses, 15 (3), 719. doi:10.3390/v15030719

de Crane D'Heysselaer, S., Parisi, G., Lisson, M., Bruyère, O., Donneau, A.-F., Fontaine, S., Gillet, L., Bureau, F., Darcis, G., Thiry, E., Ducatez, M., Snoeck, C. J., Zientara, S., Haddad, N., Humblet, M.-F., Ludwig-Begall, L., Daube, G., Thiry, D., Misset, B., ... Haubruge, E. (27 February 2023). Systematic Review of the Key Factors Influencing the Indoor Airborne Spread of SARS-CoV-2. Pathogens, 12 (3), 382. doi:10.3390/pathogens12030382

Ikeda, R.* , Nakamura, K.* , Saulmont, M., Habe, A., Duprez, J.-N., Korsak, N., Hayashi, T., Thiry, D.* , & Mainil, J.*. (17 January 2023). Escherichia coli O80 in Healthy Cattle: Absence of Shigatoxigenic and Enteropathogenic E. coli O80:H2 and (Phylo) Genomics of Non-Clonal Complex 165 E. coli O80. Microorganisms, 11 (2), 230. doi:10.3390/microorganisms11020230

Ngassam Tchamba, C., Touzain, F., Fergestad, M., De Visscher, A., L'Abee-Lund, T., De Vliegher, S., Wasteson, Y., Blanchard, Y., Argudín, M. A., Mainil, J.* , & Thiry, D.*. (January 2023). Identification of staphylococcal cassette chromosome mec in Staphylococcus aureus and non-aureus staphylococci from dairy cattle in Belgium: Comparison of multiplex PCR and whole genome sequencing. Research in Veterinary Science, 155, 150-155. doi:10.1016/j.rvsc.2023.01.011

Habets, A., Antoine, C., Wagemans, J., Vermeersch, M., Laforêt, F., Diderich, J., Lavigne, R., Mainil, J., & Thiry, D. (14 December 2022). Impact of Shiga-toxin encoding gene transduction from O80:H2 Shiga toxigenic Escherichia coli (STEC) on non-STEC strains. Scientific Reports, 12 (1), 21587. doi:10.1038/s41598-022-26198-8

Habets, A., Touzain, F., Lucas, P., Huong, N. T. T., Iguchi, A., Crombé, F., Korsak, N., Piérard, D., Saulmont, M., Cox, E., Engelen, F., Mainil, J., & Thiry, D. (10 September 2022). Identification of Five Serotypes of Enteropathogenic Escherichia coli from Diarrheic Calves and Healthy Cattle in Belgium and Comparative Genomics with Shigatoxigenic E. coli. Veterinary Sciences, 9 (9), 492. doi:10.3390/vetsci9090492

Léonard, C., Thiry, D., Taminiau, B., Daube, G., & Fontaine, J. (18 July 2022). External Ear Canal Evaluation in Dogs with Chronic Suppurative Otitis Externa: Comparison of Direct Cytology, Bacterial Culture and 16S Amplicon Profiling. Veterinary Sciences, 9 (7), 366. doi:10.3390/vetsci9070366

Toledo-Silva, B., Beuckelaere, L., De Visscher, A., Geeroms, C., Meyer, E., Piepers, S., Thiry, D., Haesebrouck, F., & De Vliegher, S. (18 February 2022). Novel Quantitative Assay to Describe In Vitro Bovine Mastitis Bacterial Pathogen Inhibition by Non-aureus Staphylococci. Pathogens, 11 (2), 264. doi:10.3390/pathogens11020264

Desmecht, S., Antoine, C., Laforêt, F., Duprez, J.-N., Schonbrodt Alain, Lieffrig, F., & Thiry, D. (2022). Isolement et pré-caractérisation d'un nouveau bactériophage contre Aeromonas salmonicida, l'agent causal de la furonculose [Paper presentation]. CIFMIA.

Habets, A., Antoine, C., Wagemans, J., Vermeersch, M., Laforêt, F., Lavigne, R., Mainil, J., & Thiry, D. (2022). Phage-mediated Shiga-toxin (Stx2d) gene transduction from O80:H2 Shiga toxigenic Escherichia coli (STEC) to non-STEC strains and in vivo virulence assessment [Poster presentation]. Viruses of Microbes 2022, Portugal.

Habets, A., Antoine, C., Wagemans Jeroen, Lavigne Rob, Mainil, J., & Thiry, D. (2022). Transduction du gène de la toxine de Shiga médiée par les phages (Stx2d) isolés d’Escherichia coli O80:H2 producteurs de Shigatoxines (STEC) vers des souches non-STEC et évaluation in vivo de la virulence [Paper presentation]. CIFMIA.

Ikeda, R., Nakamura Keiji, Korsak Koulagenko, N., Duprez, J.-N., Saulmont Marc, Hayashi Tetsuya, Thiry, D., & Mainil, J. (2022). Essais d’isolement et d’identification de souches d’Escherichia coli O80:H2 productrices de toxines de Shiga et entéropathogènes chez des bovins adultes sains à l’abattoir et en ferme [Paper presentation]. CIFMIA.

Laforêt, F., Antoine, C., Blasdel, B., Pirnay, J.-P., Brisse, S., Fall, A., Duprez, J.-N., Delcenserie, V.* , & Thiry, D.*. (2022). Characterization and in vivo assessment of two newly isolated bacteriophages against a ST13 urinary tract infection Klebsiella pneumoniae strain [Poster presentation]. Belgian Society for Microbiology.

Laforêt, F., Antoine, C., Blasdel Reuter, B., Detilleux, J., Pirnay, J.-P., Brisse, S., Fall, A., Duprez, J.-N., Delcenserie, V., & Thiry, D. (2022). In Vitro and In Vivo Assessments of Two Newly Isolated Bacteriophages against an ST13 Urinary Tract Infection Klebsiella pneumoniae. Viruses, 14 (5), 1079. doi:10.3390/v14051079

Navez, M., Antoine, C., Laforêt, F., Duprez, J.-N., Delcenserie, V., Taminiau, B., & Thiry, D. (2022). Evaluation de bactériophages actifs contre des souches d’Escherichia coli entérotoxinogènes responsables de diarrhées chez les porcelets au sevrage [Paper presentation]. CIFMIA.

Djebala, S., Evrard, J., Gregoire, F., Bayrou, C., Gille, L., Eppe, J., Casalta, H., Frisee, V., Moula, N., Sartelet, A., Thiry, D., & Bossaert, P. (29 November 2021). Antimicrobial Susceptibility Profile of Several Bacteria Species Identified in the Peritoneal Exudate of Cows Affected by Parietal Fibrinous Peritonitis after Caesarean Section. Veterinary sciences, 8 (295), 1-10. doi:10.3390/vetsci8120295

Bayrou, C., Cesarini Latorre, C., Delguste, C., Delrez, N., Douny, C., Eppe, J., Etienne, A.-L., Frisee, V., Gatez, C., Gille, L., Hupperts, C., Jauniaux, T., Jergeay, V., Korsak Koulagenko, N., Kruse, C., Loos, P., Martinelle, L., Moula, N., Parrilla Hernandez, S., ... Votion, D. (Eds.). (2021). Proceedings of the 8th FARAH-Day. Presses de la Faculté de Médecine Vétérinaire de l'ULiège.

Djebala, S., Gille, L., Eppe, J., Casalta, H., Bayrou, C., Evrard, J., Gregoire, F., Thiry, D., Moula, N., Sartelet, A., & Bossaert, P. (2021). Antimicrobial susceptibility profile of several bacteria species identified in the peritoneal exudate of cows affected by parietal fibrinous peritonitis after caesarean section. In Antimicrobial susceptibility profile of several bacteria species identified in the peritoneal exudate of cows affected by parietal fibrinous peritonitis after caesarean section. Liege, Belgium: FARAH.

Antoine, C., Laforêt, F., Blasdel, B., Fall, A., Duprez, J.-N., Mainil, J., Delcenserie, V., & Thiry, D. (2021). In Vitro Characterization and In Vivo Efficacy Assessment in Galleria mellonella Larvae of Newly Isolated Bacteriophages against Escherichia coli K1. Viruses. doi:10.3390/v13102005

Djebala, S., Croubels, S., Cherlet, M., Martinelle, L., Thiry, D., Moula, N., Sartelet, A., & BOSSART, B. (2021). Description of Plasma Penicillin G Concentrations after Intramuscular Injection in Double-Muscled Cows to Optimize the Timing of Antibiotherapy for Caesarean Section. ISRN Veterinary Science. doi:10.3390/vetsci8050067

Ekeland Fergestad, M., Touzain, F., De Vliegher, S., De Visscher, A., Thiry, D., Ngassam Tchamba, C., Mainil, J., L’Abee-Lund, T., Blanchard, Y., & Wasteson, Y. (2021). Whole Genome Sequencing of Staphylococci Isolated From Bovine Milk Samples. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.715851

Ngassam Tchamba, C., Duprez, J.-N., Lucas, P., Blanchard, Y., Boyen, F., Haesebrouck, F., Argudín, M., Mainil, J., & Thiry, D. (2021). Comparison of the Staphylococcal Chromosome Cassette (SCC) mec in Methicillin-Resistant Staphylococcus aureus (MRSA) and Non-aureus Staphylococci (MRNAS) from Animals and Humans. Antibiotics, 10, 256. doi:10.3390/antibiotics10030256

Djebala, S., Evrard, J., Gregoire, F., Thiry, D., Bayrou, C., Moula, N., Sartelet, A., & Bossaert, P. (20 November 2020). Infectious Agents Identified by Real-Time PCR, Serology and Bacteriology in Blood and Peritoneal Exudate Samples of Cows affected by Parietal Fibrinous Peritonitis after Caesarean Section [Paper presentation]. 7the FARAH-Day, Liege, Belgium.

Bayrou, C., Cesarini Latorre, C., Delguste, C., Douny, C., Gatez, C., Gille, L., Jauniaux, T., Jergeay, V., Martinelle, L., Ponthier, J., Sartelet, A., Thiry, D., & Votion, D. (Eds.). (2020). Proceedings of the 7th FARAH-Day. Presses de la Faculté de Médecine vétérinaire de l'Université de Liège.

Djebala, S., Evrard, J., Gregoire, F., Thiry, D., Bayrou, C., Moula, N., Sartelet, A., & Bossaert, P. (2020). Infectious Agents Identified by Real-Time PCR, Serology and Bacteriology in Blood and Peritoneal Exudate Samples of Cows affected by Parietal Fibrinous Peritonitis after Caesarean Section. Veterinary Sciences, 7, 134. doi:10.3390/vetsci7030134

Habets, A., Engelen, F., Duprez, J.-N., Devleesschauwer, B., Heyndrickx, M., De Zutter, L., Thiry, D., Cox, E., & Mainil, J. (2020). Identification of Shigatoxigenic and enteropathogenic Escherichia coli serotypes in healthy young dairy calves in Belgium by recto-anal mucosal swabbing. Veterinary Sciences, 7(4).E167. doi:10.3390/vetsci7040167

Guérin, V., Thiry, D., Cawez, F., Mercuri, P., Saulmont, M., & Mainil, J. (December 2019). Escherichia coli bovines β-lactames résistantes : gènes identifiés par microarrays [Poster presentation]. 39ème Réunion Interdisciplinaire de Chimiothérapie Anti-infectieuse (RICAI), Paris, France.

Guérin, V., Thiry, D., Duprez, J.-N., Saulmont, M., & Mainil, J. (08 November 2019). Triplex PCR to detect CTX-M-1, CTX-M-2 and CTX-M-9 extended-spectrum-β- lactamase-encoding genes in bovine Escherichia coli isolates [Poster presentation]. 6th FARAH DAY, Liège, Belgium.

Guérin, V., Thiry, D., Cawez, F., Mercuri, P., Mainil, J., & Saulmont, M. (July 2019). A two-year comparison of β-lactam resistance phenotypes at the disk diffusion assay of Escherichia coli from young calves in Wallonia, Belgium [Poster presentation]. 8th Symposium on Antimicrobial Resistance in Animals and the Environment (ARAE), Tours, France.

Guérin, V., Thiry, D., Cawez, F., Mercuri, P., Saulmont, M., & Mainil, J. (July 2019). bla gene identification by microarrays in phenotypically resistant Escherichia coli from young calves in Wallonia, Belgium [Poster presentation]. 8th Symposium on Antimicrobial Resistance in Animals and the Environment (ARAE), Tours, France.

Guérin, V., Thiry, D., Cawez, F., Mercuri, P., Mainil, J., & Saulmont, M. (19 June 2019). Comparaison des phénotypes de résistance aux β-lactamines observés sur deux ans à l’antibiogramme d’Escherichia coli isolées de veaux en Wallonie [Poster presentation]. Un an de plus dans la lutte contre la résistance aux antibiotiques chez les animaux. Derniers résultats relatifs à l’utilisation des antibiotiques et à l’antibiorésistance dans une large perspective, Bruxelles, Belgium.

Guérin, V., Thiry, D., Cawez, F., Mercuri, P., Saulmont, M., & Mainil, J. (19 June 2019). Escherichia coli bovines beta-lactames résistantes : gènes identifiés par microarrays [Poster presentation]. Un an de plus dans la lutte contre la résistance aux antibiotiques chez les animaux. Derniers résultats relatifs à l’utilisation des antibiotiques et à l’antibiorésistance dans une large perspective, Bruxelles, Belgium.

Thiry, D., Passet, V., Danis-Wlodarczyk, K., Lood, C., Wagemans, J., De Sordi, L., van Noort, V., Dufour, N., Debarbieux, L., Mainil, J., Brisse, S.* , & Lavigne, R.*. (03 May 2019). New Bacteriophages against Emerging Lineages ST23 and ST258 of Klebsiella pneumoniae and Efficacy Assessment in Galleria mellonella Larvae. Viruses, 11 (5). doi:10.3390/v11050411

Bayrou, C., Delguste, C., Douny, C., Gatez, C., Jauniaux, T., Ponthier, J., Sartelet, A., Thiry, D., & Votion, D. (Eds.). (2019). Proceedings of the 6th FARAH-Day. Presses de la Faculté de Médecine vétérinaire de l’Université de Liège.

Ngassam Tchamba, C., Rao, A.-S., Boyen, F., Haesebrouck, F., Duprez, J.-N., Théron, L., Thiry, D., & Mainil, J. (2019). Comparison of quantitative PCR and MALDI-TOF mass spectrometry assays for identification of bacteria in milk samples from cows with subclinical mastitis. Journal of Applied Microbiology, 127, 683-692. doi:10.1111/jam.14358

DIDESSE, E., Duprez, J.-N., Mainil, J., & Thiry, D. (26 October 2018). CHROMAgar Mastitis medium: assessment of the new formulation and comparison with the previous one [Poster presentation]. FARAH DAY 5th edition, Liege, Belgium.

Guérin, V., Thiry, D., Galleni, M., Saulmont, M., & Mainil, J. (26 October 2018). β-lactamase-encoding gene identification by microarrays in phenotypically resistant Escherichia coli from young calves in Wallonia, Belgium [Paper presentation]. 5th FARAH DAY.

Guérin, V., Thiry, D., Galleni, M., Saulmont, M., & Mainil, J. (August 2018). Beta-lactamase-encoding gene identification by micro-arrays in phenotypically resistant pathogenic Escherichia coli from young calves in Wallonia, Belgium [Paper presentation]. The 30th World Buiatric Congress 2018 Sapporo, Sapporo, Japan.

Saegerman, C., Leinartz, L., Amory, H., Bolen, G., Busoni, V., Cassart, D., Claeys, S., Dufrasne, I., Duprez, J.-N., Gabriel, A., Gommeren, K., Grulke, S., Guyot, H., Korsak Koulagenko, N., Laitat, M., Losson, B., Mainil, J., Marlier, D., Rollin, F., ... Humblet, M.-F. (01 June 2018). Teaching biosecurity standard operating procedures in the Veterinary Faculty, University of Liege, using eCampus learning platform [Poster presentation]. EAEVE General Assembly, Hannover, Germany.

Thiry, D., De Rauw, K., Tataki, S., Duprez, J.-N., Iguchi, A., Piérard, D., Korsak Koulagenko, N., & Mainil, J. (March 2018). Low prevalence of the 'gang of seven' and absence of the O80:H2 serotypes among Shigatoxigenic and enteropathogenic Escherichia coli (STEC and EPEC) in intestinal contents of healthy cattle at two slaughterhouses in Belgium in 2014. Journal of Applied Microbiology, 124 (3), 867-873. doi:10.1111/jam.13677

Bayrou, C., Cabaraux, J.-F., Delguste, C., Douny, C., Gatez, C., Jauniaux, T., Ludwig, L., Ponthier, J., Sartelet, A., Thiry, D., & Votion, D. (Eds.). (2018). Proceedings of the 5th FARAH-Day. Liège, Belgium: Presse de la Faculté de Médecine Vétérinaire de l'Université de Liège.

Thiry, D., Saulmont, M., Takaki, S., De Rauw, K., Duprez, J.-N., Iguchi, A., Piérard, D., & Mainil, J. (December 2017). Enteropathogenic Escherichia coli O80:H2 in Young Calves with Diarrhea, Belgium. Emerging Infectious Diseases, 23 (12), 2093-2095. doi:10.3201/eid2312.170450

Fakih, I.* , Thiry, D.* , Duprez, J.-N., Saulmont, M., Iguchi, A., Piérard, D., Jouant, L., Daube, G., Ogura, Y., Hayashi, T., Taminiau, B., & Mainil, J. (April 2017). Identification of Shiga toxin-producing (STEC) and enteropathogenic (EPEC) Escherichia coli in diarrhoeic calves and comparative genomics of O5 bovine and human STEC. Veterinary Microbiology, 202, 16-22. doi:10.1016/j.vetmic.2016.02.017

Bayrou, C., Cabaraux, J.-F., Delguste, C., Douny, C., Gatez, C., Jauniaux, T., Ludwig, L., Ponthier, J., Sartelet, A., Thiry, D., & Votion, D. (Eds.). (2017). Proceedings of the 4th FARAH-Day. Liège, Belgium: Presses de la Faculté de Médecine vétérinaire de l’Université de Liège.

Bayrou, C., Cabaraux, J.-F., Delguste, C., Gatez, C., Jauniaux, T., Lété, C., Sartelet, A., Thiry, D., Votion, D., & Zeippen, C. (Eds.). (2016). Proceedings of the 3rd FARAH-Day 2016. Liège, Belgium: Presses de la Faculté de Médecine vétérinaire de l'Université de Liège.

Takaki, S., Duprez, J.-N., Fakih, I., Korsak Koulagenko, N., Thiry, D., & Mainil, J. (September 2016). Identification of virulotypes and serotypes of enteropathogenic (EPEC) and Shigatoxigenic (STEC) Escherichia coli from healthy cattle at slaughterhouses in Wallonia [Poster presentation]. AESA international congress “25 years of animal epidemiology: past, present and future”, Liège, Belgium.

Bayrou, C., Cabaraux, J.-F., Delguste, C., Gatez, C., Jauniaux, T., Lété, C., Thiry, D., Votion, D., & Zeippen, C. (Eds.). (2015). Proceedings of the 2nd FARAH-Day / Faculty of Veterinary Medicine (University of Liege - Belgium). Liège, Belgium: Presses de la Faculté de Médecine vétérinaire de l’Université de Liège.

Linden, A., Thiry, D., Van Gucht, S., & Wautier, M. (2013). Hepatitis E virus. Trends and sources, report on zoonotic agents in Belgium, 70-71.

Thiry, D., Heuschen, M., Thiry, C., Frymus, T., & Thiry, E. (2013). Maladie de Carré. EMC - Veterinaire, 10, 1-9.