Publications and communications of Alessio Gamba

Kuchovska, E., Gamba, A., Maia Ladeira, L. C., Staumont, B., Lesage, R. L., Steffensen, I.-L., Soop, G. L., Hofer, T., Myhre, O., Dirven, H., Geris, L., & Fritsche, E. (24 November 2022). FIRST STEPS FOR CREATING AN ONTOLOGY FOR COGNITIVE FUNCTION DEFECTS FOR REGULATORY APPLICATION [Poster presentation]. 21st International Congress ESTIV, Sitges, Spain.

Maia Ladeira, L. C.* , Gamba, A.* , Lesage, R., Kuchovska, E., Görts, N., Verhoeven, A., Jiang, J., van Ertvelde, J., Barnes, D., Janssen, M., Berkhout, J., Roodzant, D., Teunis, M., Bozada, T. J., Luechtefeld, T., Jover, R., Vanhaecke, T., Vinken, M., Masereeuw, R., ... Staumont, B. (24 November 2022). Physiological maps and chemical-induced disease ontologies: tools to support NAMs development for next-generation risk assessment [Poster presentation]. ASPIS Open Symposium, Sitges, Spain.
* These authors have contributed equally to this work.

Barnes, D., Irvine, A., Gamba, A., Maia Ladeira, L. C., Staumont, B., Yang, H., Steffensen, I.-L., Geris, L., Janssen, M., & Masereeuw, R. (2022). Development of an adverse outcome pathway for kidney tubular necrosis. In Helena Kandarova & João Barroso, 21st International Congress ESTIV Abstract Book. Bratslava, Slovakia: ESTIV.

Berkhout, J., Piersma, A., Legler, J., Gamba, A., Maia Ladeira, L. C., Staumont, B., Lesage, R. L., Geris, L., & Heuseinkveld, H. (2022). Computational modelling of neural tube closure defects. In Helena Kandarova & João Barroso, 21st International Congress ESTIV Abstract Book. Bratslava, Slovakia: ESTIV.

Gamba, A., Maia Ladeira, L. C., Lesage, R., Roodzant, D., Barnes, D., Janssen, M., Teunis, M., Masereeuw, R., Geris, L., & Staumont, B. (20 October 2022). Physiological map to study kidney toxicity in the ONTOX project [Poster presentation]. 21st International Congress ESTIV, Sitges, Spain.

Maia Ladeira, L. C., Gamba, A., Lesage, R. L., Verhoeven, A., van Ertvelde, J., Jiang, J., Roodzant, D. L., Teunis, M., Jover, R., Vanhaecke, T., Vinken, M., Heuseinkveld, H., Geris, L., & Staumont, B. (2022). Designing physiological maps as a tool to study liver toxicology. In Helena Kandarova & João Barroso, 21st International Congress ESTIV Abstract Book. Bratslava, Slovakia: ESTIV.

Gamba, A., Maia Ladeira, L. C., Lesage, R. L., Roodzant, D. L., Barnes, D. A., Janssen, M. J., Teunis, M., Masereeuw, R., Geris, L., & Staumont, B. (2022). From Physiological Map to Ontology Unravelling Kidney Toxicity From Physiological Map to Ontology Unravelling Kidney Toxicity. In VPHi, VPH2022 Virtual Physiological Human Conference. Brussels, Belgium: VPHi.

Maia Ladeira, L. C., Gamba, A., Lesage, R. L., Verhoeven, A., Jiang, J., van Ertvelde, J., Jover, R., Vanhaecke, T., Mathieu, V., Geris, L., & Staumont, B. (2022). Developing a physiological map as a framework to study chemical- induced liver steatosis. In VPHi, VPH2022 Virtual Physiological Human Conference. Brussels, Belgium: VPHi.

Barnes, D., Irvine, A., Gamba, A., Staumont, B., Maia Ladeira, L. C., Yang, H., Steffensen, I.-L., Geris, L., Janssen, M., & Masereeuw, R. (September 2022). P01-07 Development of an adverse outcome pathway for kidney tubular necrosis. Toxicology Letters, 368, 86-S87. doi:10.1016/j.toxlet.2022.07.251

Gamba, A., Maia Ladeira, L. C., Lesage, R., Barnes, D. A., Roodzant, D., Teunis, M., Janssen, M. J., Masereeuw, R., Geris, L., & Staumont, B. (2022). P04-06 New approaches for evaluating kidney toxicity using physiological maps. Toxicology Letters. doi:10.1016/j.toxlet.2022.07.290

Kuchovska, E., Gamba, A., Maia Ladeira, L. C., Staumont, B., Lesage, R., Steffensen, I.-L., Soop, G. L., Hofer, T., Myhre, O., Dirven, H., Geris, L., & Fritsche, E. (September 2022). SOC-II-09 First steps for creating an ontology for cognitive function defects for regulatory application. Toxicology Letters, 368, 35-S36. doi:10.1016/j.toxlet.2022.07.112

Maia Ladeira, L. C., Gamba, A., Lesage, R., Ertvelde, J. V., Jiang, J., Verhoeven, A., Roodzant, D., Teunis, M., Jover, R., Vanhaecke, T., Vinken, M., Geris, L., & Staumont, B. (September 2022). P11-09 Physiology-based framework to study chemical-induced cholestasis. Toxicology Letters, 368, 165-S166. doi:10.1016/j.toxlet.2022.07.459

Staumont, B., Maia Ladeira, L. C., Gamba, A., Lesage, R., Verhoeven, A., Jiang, J., Ertvelde, J. V., Barnes, D. A., Janssen, M. J., Kuchovska, E., Berkhout, J., Roodzant, D., Teunis, M., Bozada, T., Luechtefeld, T. H., Jover, R., Vanhaecke, T., Vinken, M., Masereeuw, R., ... Geris, L. (September 2022). SOC-VI-08 Physiological maps: a benchmark tool for adverse outcome pathways and a cornerstone for the development of disease ontologies. Toxicology Letters, 368, 77-S78. doi:10.1016/j.toxlet.2022.07.228

Manganelli, S., Gamba, A., Colombo, E., & Benfenati, E. (February 2022). Using VEGAHUB Within a Weight-of-Evidence Strategy. Methods in Molecular Biology, 2425, 479-495. doi:10.1007/978-1-0716-1960-5_18

Chayawan, Selvestrel, G., Baderna, D., Toma, C., Caballero Alfonso, A. Y., Gamba, A., & Benfenati, E. (January 2022). Skin sensitization quantitative QSAR models based on mechanistic structural alerts. Toxicology, 468, 153111. doi:10.1016/j.tox.2022.153111

Diomede, L., Beeg, M., Gamba, A., Fumagalli, O., Gobbi, M., & Salmona, M. (08 June 2021). Can Antiviral Activity of Licorice Help Fight COVID-19 Infection? Biomolecules, 11 (6), 855. doi:10.3390/biom11060855

Gamba, A., Salmona, M., & Bazzoni, G. (February 2021). The similarity of inherited diseases (I): clinical similarity within the phenotypic series. BMC Medical Genomics, 14 (1), 52. doi:10.1186/s12920-021-00900-7

Gamba, A., Salmona, M., Cantù, L., & Bazzoni, G. (September 2020). The similarity of inherited diseases (II): clinical and biological similarity between the phenotypic series. BMC Medical Genomics, 13 (1), 139. doi:10.1186/s12920-020-00793-y

Gamba, A., Salmona, M., & Bazzoni, G. (June 2020). Quantitative analysis of proteins which are members of the same protein complex but cause locus heterogeneity in disease. Scientific Reports, 10 (1), 10423. doi:10.1038/s41598-020-66836-7

Carnesecchi, E., Raitano, G., Gamba, A., Benfenati, E., & Roncaglioni, A. (January 2020). Evaluation of non-commercial models for genotoxicity and carcinogenicity in the assessment of EFSA's databases. SAR and QSAR in Environmental Research, 31 (1), 33-48. doi:10.1080/1062936X.2019.1690045

Gini, G., Zanoli, F., Gamba, A., Raitano, G., & Benfenati, E. (August 2019). Could deep learning in neural networks improve the QSAR models? SAR and QSAR in Environmental Research, 30 (9), 617-642. doi:10.1080/1062936X.2019.1650827

Colombo, L., Gamba, A., Cantù, L., Salmona, M., Tagliavini, F., Rondelli, V., Del Favero, E., & Brocca, P. (May 2017). Pathogenic Aβ A2V versus protective Aβ A2T mutation: Early stage aggregation and membrane interaction. Biophysical Chemistry, 229, 11-18. doi:10.1016/j.bpc.2017.05.001