# This folder contains the script used in the Chapter "Evolution and origin of protist NRPSs"

# build_domain_subtype_pHMMs_and_similarity_matrices.sh:
# This logbook explains the commands and scripts used to generate the domain pHMMs and similarity matrices

# build_similarity_networks.sh:
# This logbook explains the commands and scripts used to generate the global and local similarity networks

# cluster_monophyletic_clades.sh:
# This logbook gives the usage of get-cdhit-monophyletic-clades.pl

# All scripts are located in scripts/ folder
# This software is copyright (c) 2026 by University of Liege / Unit of Eukaryotic Phylogenomics / Loic MEUNIER and Denis BAURAIN.
